RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 THRAP3Q9Y2W1 955 aaKnown RBP10.95□□□□□ -0.66
TCF4-266ENST00000628689 RPGRIP1LQ68CZ1 1315 aa10.94□□□□□ -0.66
TCF4-266ENST00000628689 HTRA3P83110 453 aa10.94□□□□□ -0.66
TCF4-266ENST00000628689 IFT172Q9UG01 1749 aa10.94□□□□□ -0.66
TCF4-266ENST00000628689 PARP4Q9UKK3 1724 aaKnown RBP10.94□□□□□ -0.66
TCF4-266ENST00000628689 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
TCF4-266ENST00000628689 FAM50AQ14320 339 aaKnown RBP10.93□□□□□ -0.66
TCF4-266ENST00000628689 VPS8Q8N3P4 1428 aa10.92□□□□□ -0.66
TCF4-266ENST00000628689 GPRASP1Q5JY77 1395 aa10.92□□□□□ -0.66
TCF4-266ENST00000628689 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
TCF4-266ENST00000628689 POLD1P28340 1107 aa10.92□□□□□ -0.66
TCF4-266ENST00000628689 ATP7BP35670 1465 aa10.92□□□□□ -0.66
TCF4-266ENST00000628689 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
TCF4-266ENST00000628689 TOMM70O94826 608 aa10.91□□□□□ -0.66
TCF4-266ENST00000628689 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
TCF4-266ENST00000628689 SIRT1Q96EB6 747 aa10.91□□□□□ -0.66
TCF4-266ENST00000628689 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
TCF4-266ENST00000628689 ADGRF5Q8IZF2 1346 aa10.9□□□□□ -0.66
TCF4-266ENST00000628689 WDR90Q96KV7 1748 aa10.9□□□□□ -0.66
TCF4-266ENST00000628689 DDB1Q16531 1140 aa10.9□□□□□ -0.66
TCF4-266ENST00000628689 ZNF827Q17R98 1081 aa10.9□□□□□ -0.66
TCF4-266ENST00000628689 SLC16A10Q8TF71 515 aa10.9□□□□□ -0.66
TCF4-266ENST00000628689 PPLO60437 1756 aa10.9□□□□□ -0.67
TCF4-266ENST00000628689 KNDC1Q76NI1 1749 aa10.89□□□□□ -0.67
TCF4-266ENST00000628689 COL24A1Q17RW2 1714 aa10.89□□□□□ -0.67
TCF4-266ENST00000628689 BCL9O00512 1426 aa10.88□□□□□ -0.67
TCF4-266ENST00000628689 ANKARQ7Z5J8 1434 aa10.87□□□□□ -0.67
TCF4-266ENST00000628689 YTHDC2Q9H6S0 1430 aaKnown RBP10.87□□□□□ -0.67
TCF4-266ENST00000628689 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
TCF4-266ENST00000628689 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
TCF4-266ENST00000628689 KAT6BQ8WYB5 2073 aa10.86□□□□□ -0.67
TCF4-266ENST00000628689 PAPPAQ13219 1627 aa10.86□□□□□ -0.67
TCF4-266ENST00000628689 PRR36Q9H6K5 1346 aa10.85□□□□□ -0.67
TCF4-266ENST00000628689 LRRC37A3O60309 1634 aa10.85□□□□□ -0.67
TCF4-266ENST00000628689 PHRF1Q9P1Y6 1649 aaKnown RBP10.85□□□□□ -0.67
TCF4-266ENST00000628689 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
TCF4-266ENST00000628689 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
TCF4-266ENST00000628689 HSPA1AP0DMV8 641 aaKnown RBP10.85□□□□□ -0.67
TCF4-266ENST00000628689 HSPA1BP0DMV9 641 aaKnown RBP10.85□□□□□ -0.67
TCF4-266ENST00000628689 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
TCF4-266ENST00000628689 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
TCF4-266ENST00000628689 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
TCF4-266ENST00000628689 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
TCF4-266ENST00000628689 LRRC4BQ9NT99 713 aa10.84□□□□□ -0.67
TCF4-266ENST00000628689 ROCK1Q13464 1354 aa10.84□□□□□ -0.67
TCF4-266ENST00000628689 LMO7Q8WWI1 1683 aa10.84□□□□□ -0.67
TCF4-266ENST00000628689 PNPLA7Q6ZV29 1317 aa10.84□□□□□ -0.67
TCF4-266ENST00000628689 PRAM1Q96QH2 718 aa10.83□□□□□ -0.68
TCF4-266ENST00000628689 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
TCF4-266ENST00000628689 ARHGEF28Q8N1W1 1705 aaKnown RBP10.83□□□□□ -0.68
TCF4-266ENST00000628689 CRB1P82279 1406 aa10.83□□□□□ -0.68
TCF4-266ENST00000628689 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
TCF4-266ENST00000628689 CPDO75976 1380 aa10.82□□□□□ -0.68
TCF4-266ENST00000628689 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
TCF4-266ENST00000628689 FKBP8Q14318 412 aa10.82□□□□□ -0.68
TCF4-266ENST00000628689 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
TCF4-266ENST00000628689 TNS2Q63HR2 1409 aa10.82□□□□□ -0.68
TCF4-266ENST00000628689 AKAP12Q02952 1782 aa10.81□□□□□ -0.68
TCF4-266ENST00000628689 RBM46Q8TBY0 533 aaKnown RBP10.81□□□□□ -0.68
TCF4-266ENST00000628689 NMRK2Q9NPI5 230 aa10.81□□□□□ -0.68
TCF4-266ENST00000628689 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
TCF4-266ENST00000628689 QSER1Q2KHR3 1735 aa10.79□□□□□ -0.68
TCF4-266ENST00000628689 TOM1L2Q6ZVM7 507 aa10.79□□□□□ -0.68
TCF4-266ENST00000628689 ACSBG1Q96GR2 724 aa10.79□□□□□ -0.68
TCF4-266ENST00000628689 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
TCF4-266ENST00000628689 CD2APQ9Y5K6 639 aa10.79□□□□□ -0.68
TCF4-266ENST00000628689 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
TCF4-266ENST00000628689 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
TCF4-266ENST00000628689 TFCP2L1Q9NZI6 479 aa10.78□□□□□ -0.68
TCF4-266ENST00000628689 POGKQ9P215 609 aa10.78□□□□□ -0.68
TCF4-266ENST00000628689 TULP4Q9NRJ4 1543 aa10.78□□□□□ -0.68
TCF4-266ENST00000628689 EXOC5O00471 708 aa10.77□□□□□ -0.69
TCF4-266ENST00000628689 GCP02774 474 aa10.77□□□□□ -0.69
TCF4-266ENST00000628689 FSTL1Q12841 308 aa10.77□□□□□ -0.69
TCF4-266ENST00000628689 RGL3Q3MIN7 710 aa10.77□□□□□ -0.69
TCF4-266ENST00000628689 C14orf93Q9H972 538 aaKnown RBP10.77□□□□□ -0.69
TCF4-266ENST00000628689 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
TCF4-266ENST00000628689 PDE4DIPQ5VU43 2346 aa10.76□□□□□ -0.69
TCF4-266ENST00000628689 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
TCF4-266ENST00000628689 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
TCF4-266ENST00000628689 WASLO00401 505 aaPredicted RBP10.75□□□□□ -0.69
TCF4-266ENST00000628689 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
TCF4-266ENST00000628689 USP19O94966 1318 aa10.75□□□□□ -0.69
TCF4-266ENST00000628689 MINK1Q8N4C8 1332 aaPredicted RBP10.75□□□□□ -0.69
TCF4-266ENST00000628689 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
TCF4-266ENST00000628689 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 KCNQ4P56696 695 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 CFAP70Q5T0N1 1121 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 BTAF1O14981 1849 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 BRD4O60885 1362 aaPredicted RBP10.74□□□□□ -0.69
TCF4-266ENST00000628689 EIF3AQ14152 1382 aaKnown RBP10.74□□□□□ -0.69
TCF4-266ENST00000628689 USP6P35125 1406 aa10.74□□□□□ -0.69
TCF4-266ENST00000628689 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
TCF4-266ENST00000628689 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
TCF4-266ENST00000628689 C16orf71Q8IYS4 520 aaPredicted RBP10.73□□□□□ -0.69
TCF4-266ENST00000628689 IGSF1Q8N6C5 1336 aa10.73□□□□□ -0.69
TCF4-266ENST00000628689 ITGAEP38570 1179 aa10.72□□□□□ -0.69
TCF4-266ENST00000628689 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms