RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
APLF-207ENST00000627740 IP6K1Q92551 441 aa13.32□□□□□ -0.28
APLF-207ENST00000627740 LMO7Q8WWI1 1683 aa13.32□□□□□ -0.28
APLF-207ENST00000627740 HOXC9P31274 260 aa13.32□□□□□ -0.28
APLF-207ENST00000627740 INSRP06213 1382 aa13.32□□□□□ -0.28
APLF-207ENST00000627740 BLMP54132 1417 aaPredicted RBP13.32□□□□□ -0.28
APLF-207ENST00000627740 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
APLF-207ENST00000627740 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
APLF-207ENST00000627740 LRP6O75581 1613 aa13.31□□□□□ -0.28
APLF-207ENST00000627740 NWD2Q9ULI1 1742 aa13.31□□□□□ -0.28
APLF-207ENST00000627740 FAM208AQ9UK61 1670 aaKnown RBP13.3□□□□□ -0.28
APLF-207ENST00000627740 COL3A1P02461 1466 aaPredicted RBP13.3□□□□□ -0.28
APLF-207ENST00000627740 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
APLF-207ENST00000627740 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
APLF-207ENST00000627740 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
APLF-207ENST00000627740 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
APLF-207ENST00000627740 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
APLF-207ENST00000627740 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
APLF-207ENST00000627740 CAMTA1Q9Y6Y1 1673 aa13.28□□□□□ -0.28
APLF-207ENST00000627740 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.28
APLF-207ENST00000627740 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
APLF-207ENST00000627740 COL5A2P05997 1499 aaPredicted RBP13.27□□□□□ -0.29
APLF-207ENST00000627740 CCDC184Q52MB2 194 aa13.27□□□□□ -0.29
APLF-207ENST00000627740 NUDCQ9Y266 331 aa13.27□□□□□ -0.29
APLF-207ENST00000627740 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
APLF-207ENST00000627740 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
APLF-207ENST00000627740 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
APLF-207ENST00000627740 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
APLF-207ENST00000627740 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
APLF-207ENST00000627740 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
APLF-207ENST00000627740 ERBB3P21860 1342 aa13.26□□□□□ -0.29
APLF-207ENST00000627740 IL13P35225 146 aa13.25□□□□□ -0.29
APLF-207ENST00000627740 LTV1Q96GA3 475 aaPredicted RBP13.25□□□□□ -0.29
APLF-207ENST00000627740 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
APLF-207ENST00000627740 SLIT2O94813 1529 aa13.25□□□□□ -0.29
APLF-207ENST00000627740 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
APLF-207ENST00000627740 EVA1CP58658 441 aa13.24□□□□□ -0.29
APLF-207ENST00000627740 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
APLF-207ENST00000627740 CSB-PGBD3P0DP91 1061 aa13.24□□□□□ -0.29
APLF-207ENST00000627740 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
APLF-207ENST00000627740 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
APLF-207ENST00000627740 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
APLF-207ENST00000627740 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
APLF-207ENST00000627740 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
APLF-207ENST00000627740 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
APLF-207ENST00000627740 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
APLF-207ENST00000627740 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
APLF-207ENST00000627740 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
APLF-207ENST00000627740 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.3
APLF-207ENST00000627740 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.3
APLF-207ENST00000627740 EYA1Q99502 592 aa13.21□□□□□ -0.3
APLF-207ENST00000627740 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.3
APLF-207ENST00000627740 CRB1P82279 1406 aa13.21□□□□□ -0.3
APLF-207ENST00000627740 BCL9LQ86UU0 1499 aa13.21□□□□□ -0.3
APLF-207ENST00000627740 USP21Q9UK80 565 aa13.2□□□□□ -0.3
APLF-207ENST00000627740 AFF2P51816 1311 aa13.2□□□□□ -0.3
APLF-207ENST00000627740 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
APLF-207ENST00000627740 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
APLF-207ENST00000627740 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
APLF-207ENST00000627740 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
APLF-207ENST00000627740 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
APLF-207ENST00000627740 CARD10Q9BWT7 1032 aa13.19□□□□□ -0.3
APLF-207ENST00000627740 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
APLF-207ENST00000627740 KDRP35968 1356 aa13.19□□□□□ -0.3
APLF-207ENST00000627740 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
APLF-207ENST00000627740 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
APLF-207ENST00000627740 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
APLF-207ENST00000627740 FCHSD2O94868 740 aa13.18□□□□□ -0.3
APLF-207ENST00000627740 HMOX1P09601 288 aa13.17□□□□□ -0.3
APLF-207ENST00000627740 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
APLF-207ENST00000627740 VPS72Q15906 364 aa13.17□□□□□ -0.3
APLF-207ENST00000627740 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
APLF-207ENST00000627740 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
APLF-207ENST00000627740 RSPH6AQ9H0K4 717 aa13.16□□□□□ -0.3
APLF-207ENST00000627740 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
APLF-207ENST00000627740 NEFMP07197 916 aa13.15□□□□□ -0.3
APLF-207ENST00000627740 SPATA31A5Q5VU36 1347 aa13.15□□□□□ -0.3
APLF-207ENST00000627740 SPATA31A7Q8IWB4 1347 aa13.15□□□□□ -0.3
APLF-207ENST00000627740 ATRNO75882 1429 aa13.15□□□□□ -0.3
APLF-207ENST00000627740 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
APLF-207ENST00000627740 ZNF772Q68DY9 489 aaPredicted RBP13.15□□□□□ -0.3
APLF-207ENST00000627740 TRPC5Q9UL62 973 aaPredicted RBP13.15□□□□□ -0.3
APLF-207ENST00000627740 THRAP3Q9Y2W1 955 aaKnown RBP13.15□□□□□ -0.3
APLF-207ENST00000627740 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
APLF-207ENST00000627740 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
APLF-207ENST00000627740 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
APLF-207ENST00000627740 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
APLF-207ENST00000627740 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
APLF-207ENST00000627740 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
APLF-207ENST00000627740 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
APLF-207ENST00000627740 IL2RBP14784 551 aa13.13□□□□□ -0.31
APLF-207ENST00000627740 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
APLF-207ENST00000627740 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
APLF-207ENST00000627740 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
APLF-207ENST00000627740 MEGF6O75095 1541 aa13.12□□□□□ -0.31
APLF-207ENST00000627740 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
APLF-207ENST00000627740 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
APLF-207ENST00000627740 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
APLF-207ENST00000627740 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
APLF-207ENST00000627740 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms