RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 WDR17Q8IZU2 1322 aa36.15■■■■□ 3.38
TCF4-259ENST00000627568 SLC24A1O60721 1099 aa36.15■■■■□ 3.38
TCF4-259ENST00000627568 SLC12A5Q9H2X9 1139 aa36.15■■■■□ 3.38
TCF4-259ENST00000627568 RGPD5Q99666 1765 aa36.15■■■■□ 3.38
TCF4-259ENST00000627568 USP54Q70EL1 1684 aa36.14■■■■□ 3.38
TCF4-259ENST00000627568 AXIN2Q9Y2T1 843 aa36.14■■■■□ 3.38
TCF4-259ENST00000627568 USP31Q70CQ4 1352 aa36.14■■■■□ 3.38
TCF4-259ENST00000627568 ST20-MTHFSA0A0A6YYL1 179 aa36.13■■■■□ 3.37
TCF4-259ENST00000627568 EDC4Q6P2E9 1401 aaKnown RBP36.13■■■■□ 3.37
TCF4-259ENST00000627568 ABCC6O95255 1503 aa36.12■■■■□ 3.37
TCF4-259ENST00000627568 CSB-PGBD3P0DP91 1061 aa36.11■■■■□ 3.37
TCF4-259ENST00000627568 NINLQ9Y2I6 1382 aa36.11■■■■□ 3.37
TCF4-259ENST00000627568 NME9Q86XW9 330 aa36.1■■■■□ 3.37
TCF4-259ENST00000627568 TESK2Q96S53 571 aa36.1■■■■□ 3.37
TCF4-259ENST00000627568 A0A1W2PP64 1363 aa36.1■■■■□ 3.37
TCF4-259ENST00000627568 WNK3Q9BYP7 1800 aa36.1■■■■□ 3.37
TCF4-259ENST00000627568 LRRC37A3O60309 1634 aa36.09■■■■□ 3.37
TCF4-259ENST00000627568 C11orf95C9JLR9 678 aaPredicted RBP36.08■■■■□ 3.37
TCF4-259ENST00000627568 APBA3O96018 575 aa36.07■■■■□ 3.36
TCF4-259ENST00000627568 EZH2Q15910 746 aaKnown RBP36.05■■■■□ 3.36
TCF4-259ENST00000627568 DDB1Q16531 1140 aa36.05■■■■□ 3.36
TCF4-259ENST00000627568 CDCA7Q9BWT1 371 aaPredicted RBP36.05■■■■□ 3.36
TCF4-259ENST00000627568 OVOS2A0A0G2JMS6 1433 aa36.05■■■■□ 3.36
TCF4-259ENST00000627568 OVOS2A0A0J9YW53 1432 aa36.05■■■■□ 3.36
TCF4-259ENST00000627568 OVOS2Q6IE36 1432 aa36.05■■■■□ 3.36
TCF4-259ENST00000627568 PARD3Q8TEW0 1356 aa36.04■■■■□ 3.36
TCF4-259ENST00000627568 LTN1O94822 1766 aa36.04■■■■□ 3.36
TCF4-259ENST00000627568 CARD10Q9BWT7 1032 aa36.03■■■■□ 3.36
TCF4-259ENST00000627568 USP47Q96K76 1375 aa36.02■■■■□ 3.36
TCF4-259ENST00000627568 PSDA5PKW4 1024 aaPredicted RBP36.02■■■■□ 3.36
TCF4-259ENST00000627568 CAMKK2Q96RR4 588 aa36.01■■■■□ 3.36
TCF4-259ENST00000627568 PEAK1Q9H792 1746 aa35.99■■■■□ 3.35
TCF4-259ENST00000627568 CCDC7Q96M83 1385 aa35.99■■■■□ 3.35
TCF4-259ENST00000627568 TMF1P82094 1093 aa35.97■■■■□ 3.35
TCF4-259ENST00000627568 LRP5O75197 1615 aa35.96■■■■□ 3.35
TCF4-259ENST00000627568 RREB1Q92766 1687 aa35.94■■■■□ 3.34
TCF4-259ENST00000627568 ERBB3P21860 1342 aa35.94■■■■□ 3.34
TCF4-259ENST00000627568 CLSPNQ9HAW4 1339 aa35.94■■■■□ 3.34
TCF4-259ENST00000627568 SBF2Q86WG5 1849 aa35.93■■■■□ 3.34
TCF4-259ENST00000627568 R3HDM1Q15032 1099 aaKnown RBP35.93■■■■□ 3.34
TCF4-259ENST00000627568 PCGF6Q9BYE7 350 aa35.93■■■■□ 3.34
TCF4-259ENST00000627568 TIMELESSQ9UNS1 1208 aa35.93■■■■□ 3.34
TCF4-259ENST00000627568 ANKRD36BQ8N2N9 1353 aa35.91■■■■□ 3.34
TCF4-259ENST00000627568 NLRP2Q9NX02 1062 aa35.9■■■■□ 3.34
TCF4-259ENST00000627568 NUP188Q5SRE5 1749 aa35.89■■■■□ 3.34
TCF4-259ENST00000627568 COG3Q96JB2 828 aa35.89■■■■□ 3.34
TCF4-259ENST00000627568 EXOC5O00471 708 aa35.88■■■■□ 3.33
TCF4-259ENST00000627568 CDCA8Q53HL2 280 aa35.87■■■■□ 3.33
TCF4-259ENST00000627568 TNS2Q63HR2 1409 aa35.86■■■■□ 3.33
TCF4-259ENST00000627568 MARCH10Q8NA82 808 aaPredicted RBP35.86■■■■□ 3.33
TCF4-259ENST00000627568 ANKRD24Q8TF21 1146 aa35.86■■■■□ 3.33
TCF4-259ENST00000627568 BCL9O00512 1426 aa35.85■■■■□ 3.33
TCF4-259ENST00000627568 RGPD3A6NKT7 1758 aaPredicted RBP35.85■■■■□ 3.33
TCF4-259ENST00000627568 RGPD4Q7Z3J3 1758 aa35.85■■■■□ 3.33
TCF4-259ENST00000627568 NBPF14Q5TI25 921 aa35.84■■■■□ 3.33
TCF4-259ENST00000627568 BCL11BQ9C0K0 894 aaPredicted RBP35.83■■■■□ 3.33
TCF4-259ENST00000627568 IP6K1Q92551 441 aa35.8■■■■□ 3.32
TCF4-259ENST00000627568 FAM208AQ9UK61 1670 aaKnown RBP35.8■■■■□ 3.32
TCF4-259ENST00000627568 IL2RBP14784 551 aa35.79■■■■□ 3.32
TCF4-259ENST00000627568 PLSCR1O15162 318 aa35.78■■■■□ 3.32
TCF4-259ENST00000627568 MAP3K19Q56UN5 1328 aa35.75■■■■□ 3.31
TCF4-259ENST00000627568 AMPHP49418 695 aa35.74■■■■□ 3.31
TCF4-259ENST00000627568 LTV1Q96GA3 475 aaPredicted RBP35.73■■■■□ 3.31
TCF4-259ENST00000627568 KIF20BQ96Q89 1820 aa35.72■■■■□ 3.31
TCF4-259ENST00000627568 PTF1AQ7RTS3 328 aa35.71■■■■□ 3.31
TCF4-259ENST00000627568 FYB1O15117 783 aa35.7■■■■□ 3.31
TCF4-259ENST00000627568 HOXC9P31274 260 aa35.7■■■■□ 3.31
TCF4-259ENST00000627568 GGNBP2Q9H3C7 697 aa35.7■■■■□ 3.31
TCF4-259ENST00000627568 MYOM1P52179 1685 aa35.69■■■■□ 3.3
TCF4-259ENST00000627568 RTL1A6NKG5 1358 aa35.69■■■■□ 3.3
TCF4-259ENST00000627568 NHSQ6T4R5 1651 aa35.68■■■■□ 3.3
TCF4-259ENST00000627568 KAT6BQ8WYB5 2073 aa35.67■■■■□ 3.3
TCF4-259ENST00000627568 FBLN1P23142 703 aa35.66■■■■□ 3.3
TCF4-259ENST00000627568 CCER1Q8TC90 406 aaPredicted RBP35.64■■■■□ 3.3
TCF4-259ENST00000627568 RRS1Q15050 365 aaKnown RBP35.63■■■■□ 3.29
TCF4-259ENST00000627568 ACSBG1Q96GR2 724 aa35.62■■■■□ 3.29
TCF4-259ENST00000627568 KCNQ2O43526 872 aa35.61■■■■□ 3.29
TCF4-259ENST00000627568 SMG6Q86US8 1419 aaKnown RBP35.6■■■■□ 3.29
TCF4-259ENST00000627568 NSD3Q9BZ95 1437 aa35.6■■■■□ 3.29
TCF4-259ENST00000627568 RGPD2P0DJD1 1756 aa35.6■■■■□ 3.29
TCF4-259ENST00000627568 TXNRD1Q16881 649 aa35.57■■■■□ 3.28
TCF4-259ENST00000627568 ANO8Q9HCE9 1232 aaPredicted RBP35.57■■■■□ 3.28
TCF4-259ENST00000627568 PROM2Q8N271 834 aa35.56■■■■□ 3.28
TCF4-259ENST00000627568 BTAF1O14981 1849 aa35.55■■■■□ 3.28
TCF4-259ENST00000627568 DDX54Q8TDD1 881 aaKnown RBP35.55■■■■□ 3.28
TCF4-259ENST00000627568 CARD14Q9BXL6 1004 aa35.55■■■■□ 3.28
TCF4-259ENST00000627568 POLR3GLQ9BT43 218 aa35.53■■■■□ 3.28
TCF4-259ENST00000627568 SPON1Q9HCB6 807 aa35.53■■■■□ 3.28
TCF4-259ENST00000627568 FLT4P35916 1363 aa35.52■■■■□ 3.28
TCF4-259ENST00000627568 KIF24Q5T7B8 1368 aa35.52■■■■□ 3.28
TCF4-259ENST00000627568 EIF4G2P78344 907 aaKnown RBP eCLIP35.52■■■■□ 3.283e-9■■■□□ 15.5
TCF4-259ENST00000627568 STK32BQ9NY57 414 aa35.51■■■■□ 3.28
TCF4-259ENST00000627568 INSRP06213 1382 aa35.5■■■■□ 3.27
TCF4-259ENST00000627568 MEGF6O75095 1541 aa35.49■■■■□ 3.27
TCF4-259ENST00000627568 CGNL1Q0VF96 1302 aa35.48■■■■□ 3.27
TCF4-259ENST00000627568 CASZ1Q86V15 1759 aa35.47■■■■□ 3.27
TCF4-259ENST00000627568 NBPF6Q5VWK0 638 aa35.47■■■■□ 3.27
TCF4-259ENST00000627568 ZCRB1Q8TBF4 217 aaKnown RBP35.47■■■■□ 3.27
TCF4-259ENST00000627568 NBPF4Q96M43 638 aa35.47■■■■□ 3.27
TCF4-259ENST00000627568 HSP90AB2PQ58FF8 381 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms