RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
PDXDC1-218ENST00000627450 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
PDXDC1-218ENST00000627450 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
PDXDC1-218ENST00000627450 USP19O94966 1318 aa17.8■□□□□ 0.44
PDXDC1-218ENST00000627450 MED1Q15648 1581 aaPredicted RBP17.8■□□□□ 0.44
PDXDC1-218ENST00000627450 FCHSD2O94868 740 aa17.8■□□□□ 0.44
PDXDC1-218ENST00000627450 ZNF521Q96K83 1311 aa17.8■□□□□ 0.44
PDXDC1-218ENST00000627450 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
PDXDC1-218ENST00000627450 SOS2Q07890 1332 aaPredicted RBP17.8■□□□□ 0.44
PDXDC1-218ENST00000627450 IQSEC2Q5JU85 1478 aa17.79■□□□□ 0.44
PDXDC1-218ENST00000627450 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
PDXDC1-218ENST00000627450 ARHGEF25Q86VW2 580 aa17.79■□□□□ 0.44
PDXDC1-218ENST00000627450 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
PDXDC1-218ENST00000627450 WWC1Q8IX03 1113 aa17.78■□□□□ 0.44
PDXDC1-218ENST00000627450 EYA1Q99502 592 aa17.78■□□□□ 0.44
PDXDC1-218ENST00000627450 SLIT3O75094 1523 aa17.78■□□□□ 0.44
PDXDC1-218ENST00000627450 IP6K1Q92551 441 aa17.77■□□□□ 0.44
PDXDC1-218ENST00000627450 AXIN2Q9Y2T1 843 aa17.77■□□□□ 0.44
PDXDC1-218ENST00000627450 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
PDXDC1-218ENST00000627450 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
PDXDC1-218ENST00000627450 USHBP1Q8N6Y0 703 aa17.76■□□□□ 0.43
PDXDC1-218ENST00000627450 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
PDXDC1-218ENST00000627450 ROBO1Q9Y6N7 1651 aa17.75■□□□□ 0.43
PDXDC1-218ENST00000627450 RIPK4P57078 832 aa17.75■□□□□ 0.43
PDXDC1-218ENST00000627450 PDE3BQ13370 1112 aa17.75■□□□□ 0.43
PDXDC1-218ENST00000627450 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
PDXDC1-218ENST00000627450 LRRC59Q96AG4 307 aaKnown RBP17.74■□□□□ 0.43
PDXDC1-218ENST00000627450 ARHGEF10O15013 1369 aa17.74■□□□□ 0.43
PDXDC1-218ENST00000627450 KIF24Q5T7B8 1368 aa17.73■□□□□ 0.43
PDXDC1-218ENST00000627450 RGPD1P0DJD0 1748 aa17.73■□□□□ 0.43
PDXDC1-218ENST00000627450 TRIM35Q9UPQ4 493 aa17.73■□□□□ 0.43
PDXDC1-218ENST00000627450 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
PDXDC1-218ENST00000627450 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
PDXDC1-218ENST00000627450 NEFMP07197 916 aa17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
PDXDC1-218ENST00000627450 SLFN5Q08AF3 891 aa17.71■□□□□ 0.43
PDXDC1-218ENST00000627450 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
PDXDC1-218ENST00000627450 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
PDXDC1-218ENST00000627450 KIAA0232Q92628 1395 aa17.71■□□□□ 0.42
PDXDC1-218ENST00000627450 RGPD2P0DJD1 1756 aa17.7■□□□□ 0.42
PDXDC1-218ENST00000627450 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
PDXDC1-218ENST00000627450 THUMPD2Q9BTF0 503 aaKnown RBP17.7■□□□□ 0.42
PDXDC1-218ENST00000627450 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
PDXDC1-218ENST00000627450 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
PDXDC1-218ENST00000627450 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
PDXDC1-218ENST00000627450 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
PDXDC1-218ENST00000627450 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
PDXDC1-218ENST00000627450 UBAP1LF5GYI3 381 aa17.68■□□□□ 0.42
PDXDC1-218ENST00000627450 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
PDXDC1-218ENST00000627450 TOM1O60784 492 aa17.68■□□□□ 0.42
PDXDC1-218ENST00000627450 KDRP35968 1356 aa17.67■□□□□ 0.42
PDXDC1-218ENST00000627450 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
PDXDC1-218ENST00000627450 E9PSI1 815 aa17.66■□□□□ 0.42
PDXDC1-218ENST00000627450 FKBP8Q14318 412 aa17.66■□□□□ 0.42
PDXDC1-218ENST00000627450 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
PDXDC1-218ENST00000627450 DLG5Q8TDM6 1919 aa17.66■□□□□ 0.42
PDXDC1-218ENST00000627450 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
PDXDC1-218ENST00000627450 PRDM11Q9NQV5 511 aa17.65■□□□□ 0.42
PDXDC1-218ENST00000627450 ERBB3P21860 1342 aa17.65■□□□□ 0.42
PDXDC1-218ENST00000627450 WDR63Q8IWG1 891 aa17.65■□□□□ 0.42
PDXDC1-218ENST00000627450 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
PDXDC1-218ENST00000627450 RCAN3Q9UKA8 241 aa17.64■□□□□ 0.41
PDXDC1-218ENST00000627450 COL18A1P39060 1754 aa17.63■□□□□ 0.41
PDXDC1-218ENST00000627450 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
PDXDC1-218ENST00000627450 MCM10Q7L590 875 aa17.62■□□□□ 0.41
PDXDC1-218ENST00000627450 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
PDXDC1-218ENST00000627450 AHDC1Q5TGY3 1603 aaPredicted RBP17.62■□□□□ 0.41
PDXDC1-218ENST00000627450 CPDO75976 1380 aa17.62■□□□□ 0.41
PDXDC1-218ENST00000627450 CSB-PGBD3P0DP91 1061 aa17.62■□□□□ 0.41
PDXDC1-218ENST00000627450 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
PDXDC1-218ENST00000627450 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
PDXDC1-218ENST00000627450 NEFLP07196 543 aa17.6■□□□□ 0.41
PDXDC1-218ENST00000627450 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
PDXDC1-218ENST00000627450 PHLPP1O60346 1717 aa17.6■□□□□ 0.41
PDXDC1-218ENST00000627450 CAMTA1Q9Y6Y1 1673 aa17.59■□□□□ 0.41
PDXDC1-218ENST00000627450 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.41
PDXDC1-218ENST00000627450 PLIN1O60240 522 aa17.58■□□□□ 0.4
PDXDC1-218ENST00000627450 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
PDXDC1-218ENST00000627450 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
PDXDC1-218ENST00000627450 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
PDXDC1-218ENST00000627450 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 LMOD3Q0VAK6 560 aa17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 BCAR3O75815 825 aa17.55■□□□□ 0.4
PDXDC1-218ENST00000627450 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
PDXDC1-218ENST00000627450 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
PDXDC1-218ENST00000627450 IL16Q14005 1332 aa17.54■□□□□ 0.4
PDXDC1-218ENST00000627450 TOM1L2Q6ZVM7 507 aa17.54■□□□□ 0.4
PDXDC1-218ENST00000627450 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
PDXDC1-218ENST00000627450 BTG4Q9NY30 223 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms