RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 FIGNL2A6NMB9 653 aa7.78□□□□□ -1.16
PTP4A2-220ENST00000627328 NUTM1Q86Y26 1132 aa7.78□□□□□ -1.16
PTP4A2-220ENST00000627328 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
PTP4A2-220ENST00000627328 KRTAP9-4Q9BYQ2 154 aa7.78□□□□□ -1.16
PTP4A2-220ENST00000627328 TRIM66O15016 1216 aa7.77□□□□□ -1.17
PTP4A2-220ENST00000627328 DIXDC1Q155Q3 683 aa7.77□□□□□ -1.17
PTP4A2-220ENST00000627328 NEDD1Q8NHV4 660 aa7.77□□□□□ -1.17
PTP4A2-220ENST00000627328 C6orf229H3BNL8 230 aa7.76□□□□□ -1.17
PTP4A2-220ENST00000627328 GRM5P41594 1212 aa7.76□□□□□ -1.17
PTP4A2-220ENST00000627328 GIGYF2Q6Y7W6 1299 aaKnown RBP7.76□□□□□ -1.17
PTP4A2-220ENST00000627328 SH3RF1Q7Z6J0 888 aa7.76□□□□□ -1.17
PTP4A2-220ENST00000627328 ALYREFQ86V81 257 aaKnown RBP7.76□□□□□ -1.17
PTP4A2-220ENST00000627328 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
PTP4A2-220ENST00000627328 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
PTP4A2-220ENST00000627328 GJA5P36382 358 aa7.73□□□□□ -1.17
PTP4A2-220ENST00000627328 PARP9Q8IXQ6 854 aa7.73□□□□□ -1.17
PTP4A2-220ENST00000627328 SPINT1O43278 529 aa7.72□□□□□ -1.17
PTP4A2-220ENST00000627328 BCRP11274 1271 aa7.72□□□□□ -1.17
PTP4A2-220ENST00000627328 FDX1P10109 184 aa7.71□□□□□ -1.18
PTP4A2-220ENST00000627328 PDE4DQ08499 809 aa7.71□□□□□ -1.18
PTP4A2-220ENST00000627328 DESI1Q6ICB0 168 aa7.71□□□□□ -1.18
PTP4A2-220ENST00000627328 SPIRE2Q8WWL2 714 aa7.71□□□□□ -1.18
PTP4A2-220ENST00000627328 FOXJ1Q92949 421 aa7.71□□□□□ -1.18
PTP4A2-220ENST00000627328 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
PTP4A2-220ENST00000627328 KRBA1A5PL33 1030 aa7.7□□□□□ -1.18
PTP4A2-220ENST00000627328 AGERQ15109 404 aa7.7□□□□□ -1.18
PTP4A2-220ENST00000627328 SLC24A3Q9HC58 644 aa7.7□□□□□ -1.18
PTP4A2-220ENST00000627328 LRRC4BQ9NT99 713 aa7.7□□□□□ -1.18
PTP4A2-220ENST00000627328 CTHP32929 405 aa7.69□□□□□ -1.18
PTP4A2-220ENST00000627328 GAS6Q14393 721 aa7.69□□□□□ -1.18
PTP4A2-220ENST00000627328 BPHLQ86WA6 291 aaPredicted RBP7.69□□□□□ -1.18
PTP4A2-220ENST00000627328 MBIPQ9NS73 344 aa7.69□□□□□ -1.18
PTP4A2-220ENST00000627328 SPDYE5A6NIY4 337 aa7.68□□□□□ -1.18
PTP4A2-220ENST00000627328 FSHRP23945 695 aa7.68□□□□□ -1.18
PTP4A2-220ENST00000627328 CCDC116Q8IYX3 515 aa7.67□□□□□ -1.18
PTP4A2-220ENST00000627328 PRR7Q8TB68 274 aa7.67□□□□□ -1.18
PTP4A2-220ENST00000627328 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
PTP4A2-220ENST00000627328 PCDHGC3Q9UN70 934 aa7.67□□□□□ -1.18
PTP4A2-220ENST00000627328 MAP4K5Q9Y4K4 846 aa7.67□□□□□ -1.18
PTP4A2-220ENST00000627328 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
PTP4A2-220ENST00000627328 IGF1RP08069 1367 aa7.66□□□□□ -1.18
PTP4A2-220ENST00000627328 MOXD2PA6NHM9 499 aa7.65□□□□□ -1.18
PTP4A2-220ENST00000627328 PGPEP1Q9NXJ5 209 aa7.65□□□□□ -1.18
PTP4A2-220ENST00000627328 MTMR2Q13614 643 aa7.64□□□□□ -1.19
PTP4A2-220ENST00000627328 RSBN1LQ6PCB5 846 aaPredicted RBP7.64□□□□□ -1.19
PTP4A2-220ENST00000627328 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
PTP4A2-220ENST00000627328 Q6ZVU0 165 aa7.64□□□□□ -1.19
PTP4A2-220ENST00000627328 VASH1Q7L8A9 365 aaPredicted RBP7.64□□□□□ -1.19
PTP4A2-220ENST00000627328 SENP3-EIF4A1A0A087X0R7 540 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 NDUFV2P19404 249 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 TUSC1Q2TAM9 212 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 PRPF38BQ5VTL8 546 aaKnown RBP7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 GMCL1Q96IK5 515 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 RSPH6AQ9H0K4 717 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 MKL2Q9ULH7 1088 aa7.63□□□□□ -1.19
PTP4A2-220ENST00000627328 GOLGA2P5Q9HBQ8 144 aa7.62□□□□□ -1.19
PTP4A2-220ENST00000627328 LYPD8Q6UX82 237 aa7.61□□□□□ -1.19
PTP4A2-220ENST00000627328 RIC3Q7Z5B4 369 aa7.61□□□□□ -1.19
PTP4A2-220ENST00000627328 ACDQ96AP0 544 aa7.61□□□□□ -1.19
PTP4A2-220ENST00000627328 ZBTB3Q9H5J0 574 aa7.61□□□□□ -1.19
PTP4A2-220ENST00000627328 CTSOP43234 321 aaPredicted RBP7.6□□□□□ -1.19
PTP4A2-220ENST00000627328 CBLBQ13191 982 aa7.6□□□□□ -1.19
PTP4A2-220ENST00000627328 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
PTP4A2-220ENST00000627328 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
PTP4A2-220ENST00000627328 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
PTP4A2-220ENST00000627328 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
PTP4A2-220ENST00000627328 SEMA6BQ9H3T3 888 aa7.59□□□□□ -1.19
PTP4A2-220ENST00000627328 POLMQ9NP87 494 aaPredicted RBP7.59□□□□□ -1.19
PTP4A2-220ENST00000627328 NSFL1CQ9UNZ2 370 aaKnown RBP7.59□□□□□ -1.19
PTP4A2-220ENST00000627328 OIP5O43482 229 aa7.58□□□□□ -1.2
PTP4A2-220ENST00000627328 ITGB7P26010 798 aa7.58□□□□□ -1.2
PTP4A2-220ENST00000627328 PPP1R26Q5T8A7 1209 aaPredicted RBP7.58□□□□□ -1.2
PTP4A2-220ENST00000627328 MYSM1Q5VVJ2 828 aa7.58□□□□□ -1.2
PTP4A2-220ENST00000627328 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
PTP4A2-220ENST00000627328 DDRGK1Q96HY6 314 aa7.57□□□□□ -1.2
PTP4A2-220ENST00000627328 INSM2Q96T92 566 aaPredicted RBP7.57□□□□□ -1.2
PTP4A2-220ENST00000627328 CUEDC1Q9NWM3 386 aaPredicted RBP7.57□□□□□ -1.2
PTP4A2-220ENST00000627328 HRCP23327 699 aa7.56□□□□□ -1.2
PTP4A2-220ENST00000627328 COL8A1P27658 744 aa7.56□□□□□ -1.2
PTP4A2-220ENST00000627328 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
PTP4A2-220ENST00000627328 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
PTP4A2-220ENST00000627328 PCDHB15Q9Y5E8 787 aa7.56□□□□□ -1.2
PTP4A2-220ENST00000627328 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
PTP4A2-220ENST00000627328 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
PTP4A2-220ENST00000627328 ZNF837Q96EG3 531 aaPredicted RBP7.55□□□□□ -1.2
PTP4A2-220ENST00000627328 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
PTP4A2-220ENST00000627328 MAP10Q9P2G4 905 aa7.55□□□□□ -1.2
PTP4A2-220ENST00000627328 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
PTP4A2-220ENST00000627328 PIK3R2O00459 728 aa7.54□□□□□ -1.2
PTP4A2-220ENST00000627328 LILRB3O75022 631 aa7.54□□□□□ -1.2
PTP4A2-220ENST00000627328 CLK2P49760 499 aaKnown RBP7.54□□□□□ -1.2
PTP4A2-220ENST00000627328 TRERF1Q96PN7 1200 aa7.54□□□□□ -1.2
PTP4A2-220ENST00000627328 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 RELBQ01201 579 aa7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 GRIN2CQ14957 1233 aa7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms