RNA–Protein interactions for RNA: ENST00000627309.1

LINC00216-202, long intergenic non-protein coding RNA 216, humanhuman

Gene LINC00216, Length 1,115 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-202ENST00000627309 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
LINC00216-202ENST00000627309 NFX1Q12986 1120 aaKnown RBP10.27□□□□□ -0.77
LINC00216-202ENST00000627309 NR5A1Q13285 461 aa10.27□□□□□ -0.77
LINC00216-202ENST00000627309 ARID5BQ14865 1188 aa10.27□□□□□ -0.77
LINC00216-202ENST00000627309 TRIM46Q7Z4K8 759 aa10.27□□□□□ -0.77
LINC00216-202ENST00000627309 TERTO14746 1132 aaKnown RBP10.26□□□□□ -0.77
LINC00216-202ENST00000627309 BMP1P13497 986 aa10.26□□□□□ -0.77
LINC00216-202ENST00000627309 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
LINC00216-202ENST00000627309 WASHC4Q2M389 1173 aa10.26□□□□□ -0.77
LINC00216-202ENST00000627309 GPKOWQ92917 476 aaPredicted RBP eCLIP10.26□□□□□ -0.77
LINC00216-202ENST00000627309 CALR3Q96L12 384 aaKnown RBP10.25□□□□□ -0.77
LINC00216-202ENST00000627309 TIMP2P16035 220 aa10.24□□□□□ -0.77
LINC00216-202ENST00000627309 SCARF1Q14162 830 aa10.24□□□□□ -0.77
LINC00216-202ENST00000627309 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
LINC00216-202ENST00000627309 SH3RF1Q7Z6J0 888 aa10.23□□□□□ -0.77
LINC00216-202ENST00000627309 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
LINC00216-202ENST00000627309 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
LINC00216-202ENST00000627309 PDIA4P13667 645 aaKnown RBP10.22□□□□□ -0.77
LINC00216-202ENST00000627309 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
LINC00216-202ENST00000627309 GLMNQ92990 594 aa10.22□□□□□ -0.77
LINC00216-202ENST00000627309 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
LINC00216-202ENST00000627309 C1QTNF2Q9BXJ5 285 aa10.22□□□□□ -0.77
LINC00216-202ENST00000627309 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
LINC00216-202ENST00000627309 IRF5Q13568 498 aa10.21□□□□□ -0.77
LINC00216-202ENST00000627309 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
LINC00216-202ENST00000627309 TRMT44Q8IYL2 757 aaKnown RBP10.21□□□□□ -0.77
LINC00216-202ENST00000627309 SLC16A10Q8TF71 515 aa10.21□□□□□ -0.77
LINC00216-202ENST00000627309 LRRN4Q8WUT4 740 aa10.21□□□□□ -0.77
LINC00216-202ENST00000627309 MAP4K5Q9Y4K4 846 aa10.21□□□□□ -0.77
LINC00216-202ENST00000627309 POM121CA8CG34 1229 aa10.2□□□□□ -0.78
LINC00216-202ENST00000627309 WIPF1O43516 503 aa10.2□□□□□ -0.78
LINC00216-202ENST00000627309 GRM5P41594 1212 aa10.2□□□□□ -0.78
LINC00216-202ENST00000627309 NPAS3Q8IXF0 933 aa10.2□□□□□ -0.78
LINC00216-202ENST00000627309 NXF1Q9UBU9 619 aaKnown RBP10.2□□□□□ -0.78
LINC00216-202ENST00000627309 ZIC2O95409 532 aaPredicted RBP10.19□□□□□ -0.78
LINC00216-202ENST00000627309 PNMA1Q8ND90 353 aa10.19□□□□□ -0.78
LINC00216-202ENST00000627309 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
LINC00216-202ENST00000627309 PPP1R15AO75807 674 aaPredicted RBP10.18□□□□□ -0.78
LINC00216-202ENST00000627309 PDXDC2PQ6P474 469 aa10.18□□□□□ -0.78
LINC00216-202ENST00000627309 VASH1Q7L8A9 365 aaPredicted RBP10.18□□□□□ -0.78
LINC00216-202ENST00000627309 GPR37L1O60883 481 aa10.17□□□□□ -0.78
LINC00216-202ENST00000627309 NR3C2P08235 984 aa10.17□□□□□ -0.78
LINC00216-202ENST00000627309 INSM1Q01101 510 aaPredicted RBP10.17□□□□□ -0.78
LINC00216-202ENST00000627309 ITPKCQ96DU7 683 aa10.17□□□□□ -0.78
LINC00216-202ENST00000627309 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
LINC00216-202ENST00000627309 UPP2O95045 317 aa10.16□□□□□ -0.78
LINC00216-202ENST00000627309 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
LINC00216-202ENST00000627309 ZFAND3Q9H8U3 227 aa10.16□□□□□ -0.78
LINC00216-202ENST00000627309 FKBPLQ9UIM3 349 aa10.16□□□□□ -0.78
LINC00216-202ENST00000627309 FSHRP23945 695 aa10.15□□□□□ -0.78
LINC00216-202ENST00000627309 SOX11P35716 441 aa10.15□□□□□ -0.78
LINC00216-202ENST00000627309 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
LINC00216-202ENST00000627309 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.78
LINC00216-202ENST00000627309 CARD14Q9BXL6 1004 aa10.15□□□□□ -0.78
LINC00216-202ENST00000627309 EMILIN1Q9Y6C2 1016 aa10.15□□□□□ -0.78
LINC00216-202ENST00000627309 ERFEQ4G0M1 354 aa10.14□□□□□ -0.79
LINC00216-202ENST00000627309 CDV3Q9UKY7 258 aaKnown RBP10.14□□□□□ -0.79
LINC00216-202ENST00000627309 NR6A1Q15406 480 aa10.13□□□□□ -0.79
LINC00216-202ENST00000627309 CCDC116Q8IYX3 515 aa10.13□□□□□ -0.79
LINC00216-202ENST00000627309 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
LINC00216-202ENST00000627309 IRF7Q92985 503 aa10.13□□□□□ -0.79
LINC00216-202ENST00000627309 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
LINC00216-202ENST00000627309 VAC14Q08AM6 782 aa10.12□□□□□ -0.79
LINC00216-202ENST00000627309 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
LINC00216-202ENST00000627309 ZBTB33Q86T24 672 aa10.12□□□□□ -0.79
LINC00216-202ENST00000627309 TRAIPQ9BWF2 469 aa10.12□□□□□ -0.79
LINC00216-202ENST00000627309 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
LINC00216-202ENST00000627309 PTK2Q05397 1052 aa10.11□□□□□ -0.79
LINC00216-202ENST00000627309 MEIOBQ8N635 442 aa10.11□□□□□ -0.79
LINC00216-202ENST00000627309 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
LINC00216-202ENST00000627309 STK17AQ9UEE5 414 aa10.11□□□□□ -0.79
LINC00216-202ENST00000627309 ACIN1Q9UKV3 1341 aaKnown RBP10.1□□□□□ -0.79
LINC00216-202ENST00000627309 H3BM21 787 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 BMP2P12643 396 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 PDE4CQ08493 712 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 ALG2Q9H553 416 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 PGPEP1Q9NXJ5 209 aa10.1□□□□□ -0.79
LINC00216-202ENST00000627309 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
LINC00216-202ENST00000627309 MAN1A2O60476 641 aa10.09□□□□□ -0.79
LINC00216-202ENST00000627309 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
LINC00216-202ENST00000627309 TSEN34Q9BSV6 310 aaKnown RBP10.09□□□□□ -0.79
LINC00216-202ENST00000627309 DHX9Q08211 1270 aaKnown RBP10.08□□□□□ -0.8
LINC00216-202ENST00000627309 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00216-202ENST00000627309 PBXIP1Q96AQ6 731 aa10.07□□□□□ -0.8
LINC00216-202ENST00000627309 KCTD15Q96SI1 283 aaPredicted RBP10.07□□□□□ -0.8
LINC00216-202ENST00000627309 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
LINC00216-202ENST00000627309 PPP1R26Q5T8A7 1209 aaPredicted RBP10.06□□□□□ -0.8
LINC00216-202ENST00000627309 KCTD17Q8N5Z5 321 aa10.06□□□□□ -0.8
LINC00216-202ENST00000627309 RETREG2Q8NC44 543 aa10.06□□□□□ -0.8
LINC00216-202ENST00000627309 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
LINC00216-202ENST00000627309 VEGFBP49765 207 aa10.05□□□□□ -0.8
LINC00216-202ENST00000627309 NR1H3Q13133 447 aa10.05□□□□□ -0.8
LINC00216-202ENST00000627309 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
LINC00216-202ENST00000627309 GMPRP36959 345 aa10.03□□□□□ -0.8
LINC00216-202ENST00000627309 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
LINC00216-202ENST00000627309 CFAP70Q5T0N1 1121 aa10.03□□□□□ -0.8
LINC00216-202ENST00000627309 ADAM32Q8TC27 787 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms