RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 OVOS2Q6IE36 1432 aa31.18■■■□□ 2.58
SF1-220ENST00000626028 A0A0G2JS52 829 aa31.18■■■□□ 2.58
SF1-220ENST00000626028 MYT1Q01538 1121 aa31.18■■■□□ 2.58
SF1-220ENST00000626028 EIF4G2P78344 907 aaKnown RBP eCLIP31.17■■■□□ 2.58
SF1-220ENST00000626028 LARP1Q6PKG0 1096 aaKnown RBP31.17■■■□□ 2.58
SF1-220ENST00000626028 TCP11L2Q8N4U5 519 aa31.15■■■□□ 2.58
SF1-220ENST00000626028 PARP4Q9UKK3 1724 aaKnown RBP31.15■■■□□ 2.58
SF1-220ENST00000626028 BLMP54132 1417 aaPredicted RBP31.14■■■□□ 2.58
SF1-220ENST00000626028 KIF20BQ96Q89 1820 aa31.13■■■□□ 2.57
SF1-220ENST00000626028 WNK3Q9BYP7 1800 aa31.12■■■□□ 2.57
SF1-220ENST00000626028 ZRANB1Q9UGI0 708 aa31.12■■■□□ 2.57
SF1-220ENST00000626028 WDR17Q8IZU2 1322 aa31.12■■■□□ 2.57
SF1-220ENST00000626028 ZBTB7CA1YPR0 619 aa31.11■■■□□ 2.57
SF1-220ENST00000626028 USP35Q9P2H5 1018 aa31.1■■■□□ 2.57
SF1-220ENST00000626028 AXIN2Q9Y2T1 843 aa31.1■■■□□ 2.57
SF1-220ENST00000626028 SOX12O15370 315 aa31.09■■■□□ 2.57
SF1-220ENST00000626028 RGPD1P0DJD0 1748 aa31.09■■■□□ 2.57
SF1-220ENST00000626028 COG3Q96JB2 828 aa31.08■■■□□ 2.57
SF1-220ENST00000626028 TOM1L2Q6ZVM7 507 aa31.06■■■□□ 2.56
SF1-220ENST00000626028 FAM208AQ9UK61 1670 aaKnown RBP31.04■■■□□ 2.56
SF1-220ENST00000626028 HSPA5P11021 654 aaKnown RBP31.04■■■□□ 2.56
SF1-220ENST00000626028 CDCA7Q9BWT1 371 aaPredicted RBP31.04■■■□□ 2.56
SF1-220ENST00000626028 SF3B2Q13435 895 aaKnown RBP31.03■■■□□ 2.56
SF1-220ENST00000626028 CARD10Q9BWT7 1032 aa31.03■■■□□ 2.56
SF1-220ENST00000626028 C11orf95C9JLR9 678 aaPredicted RBP31.01■■■□□ 2.55
SF1-220ENST00000626028 FYB1O15117 783 aa31.01■■■□□ 2.55
SF1-220ENST00000626028 PDE3BQ13370 1112 aa31■■■□□ 2.55
SF1-220ENST00000626028 FAM196AQ6ZSG2 479 aa31■■■□□ 2.55
SF1-220ENST00000626028 CCDC7Q96M83 1385 aa31■■■□□ 2.55
SF1-220ENST00000626028 LRRC37A3O60309 1634 aa30.99■■■□□ 2.55
SF1-220ENST00000626028 CSB-PGBD3P0DP91 1061 aa30.99■■■□□ 2.55
SF1-220ENST00000626028 ERBB3P21860 1342 aa30.98■■■□□ 2.55
SF1-220ENST00000626028 TNS1Q9HBL0 1735 aaKnown RBP30.97■■■□□ 2.55
SF1-220ENST00000626028 IP6K1Q92551 441 aa30.96■■■□□ 2.55
SF1-220ENST00000626028 CARD14Q9BXL6 1004 aa30.95■■■□□ 2.55
SF1-220ENST00000626028 NSD3Q9BZ95 1437 aa30.95■■■□□ 2.54
SF1-220ENST00000626028 RTL1A6NKG5 1358 aa30.93■■■□□ 2.54
SF1-220ENST00000626028 ANKRD26Q9UPS8 1709 aa30.93■■■□□ 2.54
SF1-220ENST00000626028 DISP2A7MBM2 1401 aa30.92■■■□□ 2.54
SF1-220ENST00000626028 PEAK1Q9H792 1746 aa30.92■■■□□ 2.54
SF1-220ENST00000626028 SBF2Q86WG5 1849 aa30.91■■■□□ 2.54
SF1-220ENST00000626028 GGNBP2Q9H3C7 697 aa30.91■■■□□ 2.54
SF1-220ENST00000626028 CGNL1Q0VF96 1302 aa30.91■■■□□ 2.54
SF1-220ENST00000626028 MAP3K19Q56UN5 1328 aa30.91■■■□□ 2.54
SF1-220ENST00000626028 KIF24Q5T7B8 1368 aa30.91■■■□□ 2.54
SF1-220ENST00000626028 BAG6P46379 1132 aa30.9■■■□□ 2.54
SF1-220ENST00000626028 DDB1Q16531 1140 aa30.9■■■□□ 2.54
SF1-220ENST00000626028 ANKRD24Q8TF21 1146 aa30.9■■■□□ 2.54
SF1-220ENST00000626028 FAM182BQ5T319 152 aa30.89■■■□□ 2.54
SF1-220ENST00000626028 OVOS2A0A0G2JMS6 1433 aa30.88■■■□□ 2.53
SF1-220ENST00000626028 AMPHP49418 695 aa30.87■■■□□ 2.53
SF1-220ENST00000626028 MAP2P11137 1827 aaKnown RBP30.87■■■□□ 2.53
SF1-220ENST00000626028 HOXC9P31274 260 aa30.86■■■□□ 2.53
SF1-220ENST00000626028 NLRP2Q9NX02 1062 aa30.86■■■□□ 2.53
SF1-220ENST00000626028 BCL9O00512 1426 aa30.86■■■□□ 2.53
SF1-220ENST00000626028 DEFB132Q7Z7B7 95 aa30.84■■■□□ 2.53
SF1-220ENST00000626028 POLR3GLQ9BT43 218 aa30.84■■■□□ 2.53
SF1-220ENST00000626028 RGPD2P0DJD1 1756 aa30.82■■■□□ 2.52
SF1-220ENST00000626028 EXOC5O00471 708 aa30.82■■■□□ 2.52
SF1-220ENST00000626028 TNS2Q63HR2 1409 aa30.81■■■□□ 2.52
SF1-220ENST00000626028 PARD3Q8TEW0 1356 aa30.8■■■□□ 2.52
SF1-220ENST00000626028 RGPD3A6NKT7 1758 aaPredicted RBP30.8■■■□□ 2.52
SF1-220ENST00000626028 RGPD4Q7Z3J3 1758 aa30.8■■■□□ 2.52
SF1-220ENST00000626028 TRIM37O94972 964 aa30.8■■■□□ 2.52
SF1-220ENST00000626028 IL2RBP14784 551 aa30.8■■■□□ 2.52
SF1-220ENST00000626028 NSD2O96028 1365 aa30.79■■■□□ 2.52
SF1-220ENST00000626028 FLT4P35916 1363 aa30.79■■■□□ 2.52
SF1-220ENST00000626028 FBLN1P23142 703 aa30.78■■■□□ 2.52
SF1-220ENST00000626028 RRS1Q15050 365 aaKnown RBP30.78■■■□□ 2.52
SF1-220ENST00000626028 SMG6Q86US8 1419 aaKnown RBP30.78■■■□□ 2.52
SF1-220ENST00000626028 INSRP06213 1382 aa30.78■■■□□ 2.52
SF1-220ENST00000626028 PANK3Q9H999 370 aa30.77■■■□□ 2.52
SF1-220ENST00000626028 MARCH10Q8NA82 808 aaPredicted RBP30.74■■■□□ 2.51
SF1-220ENST00000626028 RREB1Q92766 1687 aa30.73■■■□□ 2.51
SF1-220ENST00000626028 KIF7Q2M1P5 1343 aa30.73■■■□□ 2.51
SF1-220ENST00000626028 APBA3O96018 575 aa30.72■■■□□ 2.51
SF1-220ENST00000626028 EN1Q05925 392 aaPredicted RBP30.72■■■□□ 2.51
SF1-220ENST00000626028 LTV1Q96GA3 475 aaPredicted RBP30.72■■■□□ 2.51
SF1-220ENST00000626028 KAT6BQ8WYB5 2073 aa30.7■■■□□ 2.51
SF1-220ENST00000626028 CAMKK2Q96RR4 588 aa30.7■■■□□ 2.51
SF1-220ENST00000626028 BCL11BQ9C0K0 894 aaPredicted RBP30.68■■■□□ 2.5
SF1-220ENST00000626028 NHSQ6T4R5 1651 aa30.68■■■□□ 2.5
SF1-220ENST00000626028 HSP90AB2PQ58FF8 381 aa30.67■■■□□ 2.5
SF1-220ENST00000626028 KNSTRNQ9Y448 316 aa30.66■■■□□ 2.5
SF1-220ENST00000626028 WASHC2AQ641Q2 1341 aa30.66■■■□□ 2.5
SF1-220ENST00000626028 EMILIN1Q9Y6C2 1016 aa30.65■■■□□ 2.5
SF1-220ENST00000626028 NUP188Q5SRE5 1749 aa30.64■■■□□ 2.5
SF1-220ENST00000626028 SHANK3Q9BYB0 1731 aa30.64■■■□□ 2.5
SF1-220ENST00000626028 PLSCR1O15162 318 aa30.64■■■□□ 2.5
SF1-220ENST00000626028 EZH2Q15910 746 aaKnown RBP30.63■■■□□ 2.49
SF1-220ENST00000626028 NBPF6Q5VWK0 638 aa30.63■■■□□ 2.49
SF1-220ENST00000626028 NBPF4Q96M43 638 aa30.63■■■□□ 2.49
SF1-220ENST00000626028 POLKQ9UBT6 870 aa30.62■■■□□ 2.49
SF1-220ENST00000626028 NCAPD2Q15021 1401 aa30.6■■■□□ 2.49
SF1-220ENST00000626028 MEGF6O75095 1541 aa30.59■■■□□ 2.49
SF1-220ENST00000626028 PPM1GO15355 546 aaPredicted RBP30.58■■■□□ 2.49
SF1-220ENST00000626028 RAPGEF4Q8WZA2 1011 aa30.58■■■□□ 2.49
SF1-220ENST00000626028 BTAF1O14981 1849 aa30.57■■■□□ 2.48
SF1-220ENST00000626028 ZCRB1Q8TBF4 217 aaKnown RBP30.56■■■□□ 2.48
SF1-220ENST00000626028 AMER1Q5JTC6 1135 aaPredicted RBP30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms