RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 GIGYF1O75420 1035 aaPredicted RBP5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 ATG7O95352 703 aa5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 PDIA4P13667 645 aaKnown RBP5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 AGERQ15109 404 aa5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 SLFNL1Q499Z3 407 aa5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 CRTC2Q53ET0 693 aaPredicted RBP5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 LIAT1Q6ZQX7 453 aa5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 DZIP3Q86Y13 1208 aaKnown RBP5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 TRMT44Q8IYL2 757 aaKnown RBP5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 STK32AQ8WU08 396 aa5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 SLC10A4Q96EP9 437 aa5.16□□□□□ -1.58
SCARNA4-202ENST00000625402 ESPNB1AK53 854 aa5.15□□□□□ -1.59
SCARNA4-202ENST00000625402 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.15□□□□□ -1.59
SCARNA4-202ENST00000625402 TLL2Q9Y6L7 1015 aa5.15□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L15C9J2P7 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L10C9JJH3 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L13C9JLJ4 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L12C9JPN9 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L11C9JVI0 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L21D6R901 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L18D6R9N7 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L22D6RA61 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L17D6RBQ6 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L19D6RCP7 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L20D6RJB6 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 WNT7BP56706 349 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 CLDN10P78369 228 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 USP17L24Q0WX57 530 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 TMEM164Q5U3C3 297 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 CDCA7Q9BWT1 371 aaPredicted RBP5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 MKRN1Q9UHC7 482 aaKnown RBP5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 KIAA1024Q9UPX6 916 aa5.14□□□□□ -1.59
SCARNA4-202ENST00000625402 GGCXP38435 758 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 MCCD1P59942 119 aaPredicted RBP5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 OXLD1Q5BKU9 147 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 INTS6LQ5JSJ4 861 aaKnown RBP5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 ZNF592Q92610 1267 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 VRTNQ9H8Y1 702 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 SLAIN2Q9P270 581 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 DOLKQ9UPQ8 538 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 USTQ9Y2C2 406 aa5.13□□□□□ -1.59
SCARNA4-202ENST00000625402 FAM196BA6NMK8 535 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 ZBTB24O43167 697 aaPredicted RBP5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 DKK1O94907 266 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 SCTRP47872 440 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 RPIAP49247 311 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 RAB15P59190 212 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 PTK7Q13308 1070 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 NBPF20Q3BBV1 942 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 RC3H1Q5TC82 1133 aaKnown RBP5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 PODXL2Q9NZ53 605 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 PLA2G2EQ9NZK7 142 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 NOVA2Q9UNW9 492 aaKnown RBP5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 MAP4K5Q9Y4K4 846 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 PCDHB11Q9Y5F2 797 aa5.12□□□□□ -1.59
SCARNA4-202ENST00000625402 CSB-PGBD3P0DP91 1061 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 RASA1P20936 1047 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 FSHRP23945 695 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 VARSP26640 1264 aaKnown RBP5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 FAM69CQ0P6D2 419 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 ELOAQ14241 798 aaKnown RBP5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 EML3Q32P44 896 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 MAP7D1Q3KQU3 841 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 IFFO2Q5TF58 517 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 OGFOD1Q8N543 542 aa5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 ZNF594Q96JF6 807 aaPredicted RBP5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 KCTD15Q96SI1 283 aaPredicted RBP5.11□□□□□ -1.59
SCARNA4-202ENST00000625402 ATP5J2-PTCD1G3V325 749 aa5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 ERVH48-1M5A8F1 160 aa5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 SIAH2O43255 324 aa5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 VASH1Q7L8A9 365 aaPredicted RBP5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 AEBP1Q8IUX7 1158 aa5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 EHBP1Q8NDI1 1231 aa5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 CDK15Q96Q40 435 aa5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 ACIN1Q9UKV3 1341 aaKnown RBP5.1□□□□□ -1.59
SCARNA4-202ENST00000625402 NR3C2P08235 984 aa5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 GRM5P41594 1212 aa5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 GTF2IP78347 998 aa5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 DPYDQ12882 1025 aa5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 SEPT12Q8IYM1 358 aa5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 CDV3Q9UKY7 258 aaKnown RBP5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 PCDHGA11Q9Y5H2 935 aa5.09□□□□□ -1.59
SCARNA4-202ENST00000625402 A0A0G2JS52 829 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 WNT7AO00755 349 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 ZBTB7BO15156 539 aaPredicted RBP5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 LZTS3O60299 673 aaPredicted RBP5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 STAU1O95793 577 aaKnown RBP5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 SLC19A1P41440 591 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 ARID5BQ14865 1188 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 PHLDB3Q6NSJ2 640 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 ANKMY2Q8IV38 441 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 SIX5Q8N196 739 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 MRGPRX2Q96LB1 330 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 TMPRSS4Q9NRS4 437 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 DNAAF2Q9NVR5 837 aaKnown RBP5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 NOD1Q9Y239 953 aa5.08□□□□□ -1.6
SCARNA4-202ENST00000625402 ADH1CP00326 375 aa5.07□□□□□ -1.6
SCARNA4-202ENST00000625402 ERVK-9P63128 1117 aa5.07□□□□□ -1.6
SCARNA4-202ENST00000625402 RNF20Q5VTR2 975 aa5.07□□□□□ -1.6
SCARNA4-202ENST00000625402 SPRYD7Q5W111 196 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms