RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 SBNO2Q9Y2G9 1366 aa19.47■□□□□ 0.71
USH1C-211ENST00000624811 NFAT5O94916 1531 aa19.47■□□□□ 0.71
USH1C-211ENST00000624811 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
USH1C-211ENST00000624811 CAMKK2Q96RR4 588 aa19.47■□□□□ 0.71
USH1C-211ENST00000624811 RREB1Q92766 1687 aa19.46■□□□□ 0.71
USH1C-211ENST00000624811 CSB-PGBD3P0DP91 1061 aa19.46■□□□□ 0.71
USH1C-211ENST00000624811 ARHGEF25Q86VW2 580 aa19.46■□□□□ 0.71
USH1C-211ENST00000624811 CD163L1Q9NR16 1453 aa19.46■□□□□ 0.71
USH1C-211ENST00000624811 WDR17Q8IZU2 1322 aa19.46■□□□□ 0.71
USH1C-211ENST00000624811 SBF2Q86WG5 1849 aa19.46■□□□□ 0.71
USH1C-211ENST00000624811 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
USH1C-211ENST00000624811 LTN1O94822 1766 aa19.45■□□□□ 0.7
USH1C-211ENST00000624811 NME9Q86XW9 330 aa19.45■□□□□ 0.7
USH1C-211ENST00000624811 PEAK1Q9H792 1746 aa19.45■□□□□ 0.7
USH1C-211ENST00000624811 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
USH1C-211ENST00000624811 TRIM26Q12899 539 aaPredicted RBP19.43■□□□□ 0.7
USH1C-211ENST00000624811 DDB1Q16531 1140 aa19.43■□□□□ 0.7
USH1C-211ENST00000624811 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
USH1C-211ENST00000624811 HDGFL2Q7Z4V5 671 aaPredicted RBP19.42■□□□□ 0.7
USH1C-211ENST00000624811 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
USH1C-211ENST00000624811 OVOS2A0A0J9YW53 1432 aa19.42■□□□□ 0.7
USH1C-211ENST00000624811 OVOS2Q6IE36 1432 aa19.42■□□□□ 0.7
USH1C-211ENST00000624811 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
USH1C-211ENST00000624811 USP31Q70CQ4 1352 aa19.39■□□□□ 0.69
USH1C-211ENST00000624811 PARD3Q8TEW0 1356 aa19.39■□□□□ 0.69
USH1C-211ENST00000624811 ST20-MTHFSA0A0A6YYL1 179 aa19.38■□□□□ 0.69
USH1C-211ENST00000624811 CARD10Q9BWT7 1032 aa19.38■□□□□ 0.69
USH1C-211ENST00000624811 EDC4Q6P2E9 1401 aaKnown RBP19.37■□□□□ 0.69
USH1C-211ENST00000624811 MARCH10Q8NA82 808 aaPredicted RBP19.37■□□□□ 0.69
USH1C-211ENST00000624811 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
USH1C-211ENST00000624811 ABCC6O95255 1503 aa19.36■□□□□ 0.69
USH1C-211ENST00000624811 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
USH1C-211ENST00000624811 TESK2Q96S53 571 aa19.35■□□□□ 0.69
USH1C-211ENST00000624811 CDCA7Q9BWT1 371 aaPredicted RBP19.35■□□□□ 0.69
USH1C-211ENST00000624811 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
USH1C-211ENST00000624811 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
USH1C-211ENST00000624811 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
USH1C-211ENST00000624811 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
USH1C-211ENST00000624811 CCDC7Q96M83 1385 aa19.33■□□□□ 0.69
USH1C-211ENST00000624811 C11orf95C9JLR9 678 aaPredicted RBP19.33■□□□□ 0.68
USH1C-211ENST00000624811 EXOC5O00471 708 aa19.32■□□□□ 0.68
USH1C-211ENST00000624811 ERBB3P21860 1342 aa19.31■□□□□ 0.68
USH1C-211ENST00000624811 ANKRD24Q8TF21 1146 aa19.31■□□□□ 0.68
USH1C-211ENST00000624811 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
USH1C-211ENST00000624811 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
USH1C-211ENST00000624811 BCL11BQ9C0K0 894 aaPredicted RBP19.3■□□□□ 0.68
USH1C-211ENST00000624811 TNS2Q63HR2 1409 aa19.3■□□□□ 0.68
USH1C-211ENST00000624811 LTV1Q96GA3 475 aaPredicted RBP19.29■□□□□ 0.68
USH1C-211ENST00000624811 USP47Q96K76 1375 aa19.29■□□□□ 0.68
USH1C-211ENST00000624811 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
USH1C-211ENST00000624811 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.68
USH1C-211ENST00000624811 PLSCR1O15162 318 aa19.27■□□□□ 0.68
USH1C-211ENST00000624811 NHSQ6T4R5 1651 aa19.27■□□□□ 0.67
USH1C-211ENST00000624811 FBLN1P23142 703 aa19.26■□□□□ 0.67
USH1C-211ENST00000624811 ACSBG1Q96GR2 724 aa19.26■□□□□ 0.67
USH1C-211ENST00000624811 COG3Q96JB2 828 aa19.26■□□□□ 0.67
USH1C-211ENST00000624811 BCL9O00512 1426 aa19.25■□□□□ 0.67
USH1C-211ENST00000624811 FAM208AQ9UK61 1670 aaKnown RBP19.25■□□□□ 0.67
USH1C-211ENST00000624811 KCNQ2O43526 872 aa19.25■□□□□ 0.67
USH1C-211ENST00000624811 IL2RBP14784 551 aa19.25■□□□□ 0.67
USH1C-211ENST00000624811 TMF1P82094 1093 aa19.25■□□□□ 0.67
USH1C-211ENST00000624811 ANO8Q9HCE9 1232 aaPredicted RBP19.25■□□□□ 0.67
USH1C-211ENST00000624811 ANKRD36BQ8N2N9 1353 aa19.24■□□□□ 0.67
USH1C-211ENST00000624811 IP6K1Q92551 441 aa19.24■□□□□ 0.67
USH1C-211ENST00000624811 KIF20BQ96Q89 1820 aa19.23■□□□□ 0.67
USH1C-211ENST00000624811 PROM2Q8N271 834 aa19.23■□□□□ 0.67
USH1C-211ENST00000624811 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
USH1C-211ENST00000624811 MAP3K19Q56UN5 1328 aa19.23■□□□□ 0.67
USH1C-211ENST00000624811 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
USH1C-211ENST00000624811 BTAF1O14981 1849 aa19.22■□□□□ 0.67
USH1C-211ENST00000624811 CASZ1Q86V15 1759 aa19.21■□□□□ 0.67
USH1C-211ENST00000624811 AMPHP49418 695 aa19.21■□□□□ 0.67
USH1C-211ENST00000624811 TXNRD1Q16881 649 aa19.21■□□□□ 0.67
USH1C-211ENST00000624811 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
USH1C-211ENST00000624811 HOXC9P31274 260 aa19.2■□□□□ 0.66
USH1C-211ENST00000624811 SPON1Q9HCB6 807 aa19.2■□□□□ 0.66
USH1C-211ENST00000624811 MYOM1P52179 1685 aa19.2■□□□□ 0.66
USH1C-211ENST00000624811 PDGFDQ9GZP0 370 aaPredicted RBP19.19■□□□□ 0.66
USH1C-211ENST00000624811 PPP1R1BQ9UD71 204 aaPredicted RBP19.19■□□□□ 0.66
USH1C-211ENST00000624811 RRS1Q15050 365 aaKnown RBP19.18■□□□□ 0.66
USH1C-211ENST00000624811 DDX54Q8TDD1 881 aaKnown RBP19.18■□□□□ 0.66
USH1C-211ENST00000624811 FYB1O15117 783 aa19.17■□□□□ 0.66
USH1C-211ENST00000624811 STK32BQ9NY57 414 aa19.17■□□□□ 0.66
USH1C-211ENST00000624811 DOT1LQ8TEK3 1739 aa19.16■□□□□ 0.66
USH1C-211ENST00000624811 SHANK3Q9BYB0 1731 aa19.16■□□□□ 0.66
USH1C-211ENST00000624811 ZBTB7AO95365 584 aa19.15■□□□□ 0.66
USH1C-211ENST00000624811 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
USH1C-211ENST00000624811 USHBP1Q8N6Y0 703 aa19.14■□□□□ 0.65
USH1C-211ENST00000624811 SLC15A2Q16348 729 aa19.13■□□□□ 0.65
USH1C-211ENST00000624811 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
USH1C-211ENST00000624811 MEGF6O75095 1541 aa19.13■□□□□ 0.65
USH1C-211ENST00000624811 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
USH1C-211ENST00000624811 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
USH1C-211ENST00000624811 NSD3Q9BZ95 1437 aa19.11■□□□□ 0.65
USH1C-211ENST00000624811 SYTL4Q96C24 671 aaPredicted RBP19.11■□□□□ 0.65
USH1C-211ENST00000624811 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
USH1C-211ENST00000624811 CARD14Q9BXL6 1004 aa19.11■□□□□ 0.65
USH1C-211ENST00000624811 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
USH1C-211ENST00000624811 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
USH1C-211ENST00000624811 SMG6Q86US8 1419 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms