RNA–Protein interactions for RNA: ENST00000624513.1

PCDHB3-202, Transcript of protocadherin beta 3, humanhuman

TSL 3

Gene PCDHB3, Length 162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-202ENST00000624513 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
PCDHB3-202ENST00000624513 HSP90AB2PQ58FF8 381 aa13.64□□□□□ -0.23
PCDHB3-202ENST00000624513 ABCC6O95255 1503 aa13.64□□□□□ -0.23
PCDHB3-202ENST00000624513 ADAMTS2O95450 1211 aa13.63□□□□□ -0.23
PCDHB3-202ENST00000624513 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
PCDHB3-202ENST00000624513 CHRNA2Q15822 529 aa13.62□□□□□ -0.23
PCDHB3-202ENST00000624513 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
PCDHB3-202ENST00000624513 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
PCDHB3-202ENST00000624513 LTN1O94822 1766 aa13.61□□□□□ -0.23
PCDHB3-202ENST00000624513 IL13P35225 146 aa13.61□□□□□ -0.23
PCDHB3-202ENST00000624513 EVA1CP58658 441 aa13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 EIF4A2Q14240 407 aaKnown RBP13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 CCDC184Q52MB2 194 aa13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
PCDHB3-202ENST00000624513 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHB3-202ENST00000624513 BTG4Q9NY30 223 aa13.59□□□□□ -0.23
PCDHB3-202ENST00000624513 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
PCDHB3-202ENST00000624513 COL18A1P39060 1754 aa13.58□□□□□ -0.23
PCDHB3-202ENST00000624513 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.23
PCDHB3-202ENST00000624513 FNBP4Q8N3X1 1017 aaPredicted RBP13.58□□□□□ -0.24
PCDHB3-202ENST00000624513 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
PCDHB3-202ENST00000624513 C8orf37Q96NL8 207 aa13.58□□□□□ -0.24
PCDHB3-202ENST00000624513 PNNQ9H307 717 aaKnown RBP13.58□□□□□ -0.24
PCDHB3-202ENST00000624513 ERBB3P21860 1342 aa13.58□□□□□ -0.24
PCDHB3-202ENST00000624513 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
PCDHB3-202ENST00000624513 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
PCDHB3-202ENST00000624513 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
PCDHB3-202ENST00000624513 CAMTA1Q9Y6Y1 1673 aa13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 FCHSD2O94868 740 aa13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 EYA1Q99502 592 aa13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 WDR17Q8IZU2 1322 aa13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 LRP6O75581 1613 aa13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
PCDHB3-202ENST00000624513 UNC5CLQ8IV45 518 aa13.55□□□□□ -0.24
PCDHB3-202ENST00000624513 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
PCDHB3-202ENST00000624513 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
PCDHB3-202ENST00000624513 ADAMTS8Q9UP79 889 aa13.55□□□□□ -0.24
PCDHB3-202ENST00000624513 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
PCDHB3-202ENST00000624513 SLIT2O94813 1529 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 IGSF1Q8N6C5 1336 aa13.54□□□□□ -0.24
PCDHB3-202ENST00000624513 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
PCDHB3-202ENST00000624513 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
PCDHB3-202ENST00000624513 USP21Q9UK80 565 aa13.53□□□□□ -0.24
PCDHB3-202ENST00000624513 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
PCDHB3-202ENST00000624513 NEFMP07197 916 aa13.52□□□□□ -0.25
PCDHB3-202ENST00000624513 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
PCDHB3-202ENST00000624513 RGPD5Q99666 1765 aa13.52□□□□□ -0.25
PCDHB3-202ENST00000624513 BCL9LQ86UU0 1499 aa13.51□□□□□ -0.25
PCDHB3-202ENST00000624513 CRB1P82279 1406 aa13.51□□□□□ -0.25
PCDHB3-202ENST00000624513 AFF2P51816 1311 aa13.51□□□□□ -0.25
PCDHB3-202ENST00000624513 VPS72Q15906 364 aa13.51□□□□□ -0.25
PCDHB3-202ENST00000624513 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
PCDHB3-202ENST00000624513 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 KDRP35968 1356 aa13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 HMOX1P09601 288 aa13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 ZNF772Q68DY9 489 aaPredicted RBP13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
PCDHB3-202ENST00000624513 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
PCDHB3-202ENST00000624513 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
PCDHB3-202ENST00000624513 TCP11L2Q8N4U5 519 aa13.49□□□□□ -0.25
PCDHB3-202ENST00000624513 RAPGEF4Q8WZA2 1011 aa13.49□□□□□ -0.25
PCDHB3-202ENST00000624513 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
PCDHB3-202ENST00000624513 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-202ENST00000624513 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 SPATA31A1Q5TZJ5 1347 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 PLEKHF1Q96S99 279 aa13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
PCDHB3-202ENST00000624513 MAPK8IP3Q9UPT6 1336 aa13.47□□□□□ -0.25
PCDHB3-202ENST00000624513 TATP17735 454 aaPredicted RBP13.47□□□□□ -0.25
PCDHB3-202ENST00000624513 AMOTQ4VCS5 1084 aa13.47□□□□□ -0.25
PCDHB3-202ENST00000624513 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
PCDHB3-202ENST00000624513 IL2RBP14784 551 aa13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 USP35Q9P2H5 1018 aa13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 NRAPQ86VF7 1730 aa13.46□□□□□ -0.25
PCDHB3-202ENST00000624513 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-202ENST00000624513 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-202ENST00000624513 GJD4Q96KN9 370 aaPredicted RBP13.45□□□□□ -0.26
PCDHB3-202ENST00000624513 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
PCDHB3-202ENST00000624513 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms