RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 AMPHP49418 695 aa17.71■□□□□ 0.43
TRIM39-RPP21-201ENST00000623385 IP6K1Q92551 441 aa17.71■□□□□ 0.43
TRIM39-RPP21-201ENST00000623385 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
TRIM39-RPP21-201ENST00000623385 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.43
TRIM39-RPP21-201ENST00000623385 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
TRIM39-RPP21-201ENST00000623385 FLT4P35916 1363 aa17.7■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 CAMTA1Q9Y6Y1 1673 aa17.7■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 INSRP06213 1382 aa17.69■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 COL14A1Q05707 1796 aaKnown RBP17.67■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 ABCC6O95255 1503 aa17.67■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 RGPD5Q99666 1765 aa17.67■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 SLIT2O94813 1529 aa17.65■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 IL13P35225 146 aa17.65■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 ERBB3P21860 1342 aa17.65■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 MRS2Q9HD23 443 aa17.64■□□□□ 0.42
TRIM39-RPP21-201ENST00000623385 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 ANKRD24Q8TF21 1146 aa17.64■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 FNBP4Q8N3X1 1017 aaPredicted RBP17.63■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 NGLY1Q96IV0 654 aa17.63■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 NRAPQ86VF7 1730 aa17.61■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 STRN4Q9NRL3 753 aa17.61■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 EYA1Q99502 592 aa17.6■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 AFF2P51816 1311 aa17.59■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.41
TRIM39-RPP21-201ENST00000623385 EVA1CP58658 441 aa17.58■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 USHBP1Q8N6Y0 703 aa17.58■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 IGSF1Q8N6C5 1336 aa17.57■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 U2SURPO15042 1029 aaKnown RBP17.57■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 CSB-PGBD3P0DP91 1061 aa17.57■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 USP21Q9UK80 565 aa17.57■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 HMOX1P09601 288 aa17.55■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 CRB1P82279 1406 aa17.54■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 FAM208AQ9UK61 1670 aaKnown RBP17.54■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 RGS17Q9UGC6 210 aaPredicted RBP17.53■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 KDRP35968 1356 aa17.53■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.53■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 VPS72Q15906 364 aa17.52■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 SPATA31A1Q5TZJ5 1347 aa17.52■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
TRIM39-RPP21-201ENST00000623385 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 ATRNO75882 1429 aa17.51■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 MEGF6O75095 1541 aa17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 GLI3P10071 1580 aa17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 FCHSD2O94868 740 aa17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 CCDC146Q8IYE0 955 aa17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 TRPC5Q9UL62 973 aaPredicted RBP17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 TCP11L2Q8N4U5 519 aa17.47■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 DISP2A7MBM2 1401 aa17.46■□□□□ 0.39
TRIM39-RPP21-201ENST00000623385 ZNF772Q68DY9 489 aaPredicted RBP17.45■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 IL2RBP14784 551 aa17.43■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 WNK3Q9BYP7 1800 aa17.42■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms