RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 C10orf71Q711Q0 1435 aa10.37□□□□□ -0.75
CDKL5-204ENST00000623364 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
CDKL5-204ENST00000623364 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
CDKL5-204ENST00000623364 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
CDKL5-204ENST00000623364 LARP1Q6PKG0 1096 aaKnown RBP10.36□□□□□ -0.75
CDKL5-204ENST00000623364 DDB1Q16531 1140 aa10.35□□□□□ -0.75
CDKL5-204ENST00000623364 RRAGCQ9HB90 399 aa10.35□□□□□ -0.75
CDKL5-204ENST00000623364 KIAA0232Q92628 1395 aa10.35□□□□□ -0.75
CDKL5-204ENST00000623364 PNPLA7Q6ZV29 1317 aa10.34□□□□□ -0.75
CDKL5-204ENST00000623364 BCL9O00512 1426 aa10.34□□□□□ -0.75
CDKL5-204ENST00000623364 HSPA8P11142 646 aaKnown RBP10.34□□□□□ -0.75
CDKL5-204ENST00000623364 PXDNLA1KZ92 1463 aa10.34□□□□□ -0.75
CDKL5-204ENST00000623364 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
CDKL5-204ENST00000623364 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
CDKL5-204ENST00000623364 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
CDKL5-204ENST00000623364 TFCP2L1Q9NZI6 479 aa10.33□□□□□ -0.76
CDKL5-204ENST00000623364 BRD4O60885 1362 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-204ENST00000623364 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
CDKL5-204ENST00000623364 CICQ96RK0 1608 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-204ENST00000623364 PLEKHG2Q9H7P9 1386 aa10.32□□□□□ -0.76
CDKL5-204ENST00000623364 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
CDKL5-204ENST00000623364 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
CDKL5-204ENST00000623364 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
CDKL5-204ENST00000623364 PHRF1Q9P1Y6 1649 aaKnown RBP10.32□□□□□ -0.76
CDKL5-204ENST00000623364 MYOM3Q5VTT5 1437 aa10.31□□□□□ -0.76
CDKL5-204ENST00000623364 HABP4Q5JVS0 413 aaKnown RBP10.3□□□□□ -0.76
CDKL5-204ENST00000623364 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
CDKL5-204ENST00000623364 KCPQ6ZWJ8 1503 aa10.29□□□□□ -0.76
CDKL5-204ENST00000623364 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
CDKL5-204ENST00000623364 MARCH10Q8NA82 808 aaPredicted RBP10.29□□□□□ -0.76
CDKL5-204ENST00000623364 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
CDKL5-204ENST00000623364 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
CDKL5-204ENST00000623364 CNTNAP1P78357 1384 aa10.28□□□□□ -0.76
CDKL5-204ENST00000623364 ALS2Q96Q42 1657 aa10.28□□□□□ -0.76
CDKL5-204ENST00000623364 GPRASP1Q5JY77 1395 aa10.27□□□□□ -0.76
CDKL5-204ENST00000623364 RGPD8O14715 1765 aaPredicted RBP10.27□□□□□ -0.77
CDKL5-204ENST00000623364 MSL1Q68DK7 614 aa10.27□□□□□ -0.77
CDKL5-204ENST00000623364 ARHGAP27Q6ZUM4 889 aa10.27□□□□□ -0.77
CDKL5-204ENST00000623364 WAPLQ7Z5K2 1190 aa10.27□□□□□ -0.77
CDKL5-204ENST00000623364 HIRIP3Q9BW71 556 aaPredicted RBP10.27□□□□□ -0.77
CDKL5-204ENST00000623364 LRRC4BQ9NT99 713 aa10.27□□□□□ -0.77
CDKL5-204ENST00000623364 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
CDKL5-204ENST00000623364 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
CDKL5-204ENST00000623364 C9orf131Q5VYM1 1079 aa10.26□□□□□ -0.77
CDKL5-204ENST00000623364 MPNDQ8N594 471 aa10.26□□□□□ -0.77
CDKL5-204ENST00000623364 CRYBG1Q9Y4K1 1723 aa10.26□□□□□ -0.77
CDKL5-204ENST00000623364 ANKRD30AQ9BXX3 1397 aa10.26□□□□□ -0.77
CDKL5-204ENST00000623364 TRPM3Q9HCF6 1732 aaPredicted RBP10.25□□□□□ -0.77
CDKL5-204ENST00000623364 MAP2K1Q02750 393 aaPredicted RBP10.25□□□□□ -0.77
CDKL5-204ENST00000623364 MCOLN1Q9GZU1 580 aa10.25□□□□□ -0.77
CDKL5-204ENST00000623364 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
CDKL5-204ENST00000623364 VEGFBP49765 207 aa10.24□□□□□ -0.77
CDKL5-204ENST00000623364 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
CDKL5-204ENST00000623364 CLTCL1P53675 1640 aa10.24□□□□□ -0.77
CDKL5-204ENST00000623364 CRB1P82279 1406 aa10.24□□□□□ -0.77
CDKL5-204ENST00000623364 E9PCH4 1651 aa10.23□□□□□ -0.77
CDKL5-204ENST00000623364 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-204ENST00000623364 VEGFAP15692 232 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-204ENST00000623364 CDCA7Q9BWT1 371 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-204ENST00000623364 TUBGCP6Q96RT7 1819 aa10.22□□□□□ -0.77
CDKL5-204ENST00000623364 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
CDKL5-204ENST00000623364 BEGAINQ9BUH8 593 aa10.21□□□□□ -0.77
CDKL5-204ENST00000623364 STK26Q9P289 416 aa10.21□□□□□ -0.77
CDKL5-204ENST00000623364 BCS1LQ9Y276 419 aa10.21□□□□□ -0.77
CDKL5-204ENST00000623364 FXR1P51114 621 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDKL5-204ENST00000623364 SOX10P56693 466 aa10.2□□□□□ -0.78
CDKL5-204ENST00000623364 NHSQ6T4R5 1651 aa10.2□□□□□ -0.78
CDKL5-204ENST00000623364 COL23A1Q86Y22 540 aaPredicted RBP10.2□□□□□ -0.78
CDKL5-204ENST00000623364 PKD1L3Q7Z443 1732 aa10.19□□□□□ -0.78
CDKL5-204ENST00000623364 ACIN1Q9UKV3 1341 aaKnown RBP10.19□□□□□ -0.78
CDKL5-204ENST00000623364 ACSBG1Q96GR2 724 aa10.19□□□□□ -0.78
CDKL5-204ENST00000623364 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
CDKL5-204ENST00000623364 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
CDKL5-204ENST00000623364 IFT172Q9UG01 1749 aa10.19□□□□□ -0.78
CDKL5-204ENST00000623364 A0A0C4DFX4 3053 aa10.18□□□□□ -0.78
CDKL5-204ENST00000623364 RNF181Q9P0P0 153 aa10.18□□□□□ -0.78
CDKL5-204ENST00000623364 CHIC2Q9UKJ5 165 aa10.18□□□□□ -0.78
CDKL5-204ENST00000623364 COL5A2P05997 1499 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-204ENST00000623364 USP6P35125 1406 aa10.17□□□□□ -0.78
CDKL5-204ENST00000623364 PLEKHH1Q9ULM0 1364 aa10.17□□□□□ -0.78
CDKL5-204ENST00000623364 EXOC5O00471 708 aa10.17□□□□□ -0.78
CDKL5-204ENST00000623364 BTAF1O14981 1849 aa10.17□□□□□ -0.78
CDKL5-204ENST00000623364 LMO7Q8WWI1 1683 aa10.16□□□□□ -0.78
CDKL5-204ENST00000623364 TRPM1Q7Z4N2 1603 aa10.16□□□□□ -0.78
CDKL5-204ENST00000623364 DGKZQ13574 1117 aa10.16□□□□□ -0.78
CDKL5-204ENST00000623364 TOM1L2Q6ZVM7 507 aa10.16□□□□□ -0.78
CDKL5-204ENST00000623364 KAT6BQ8WYB5 2073 aa10.16□□□□□ -0.78
CDKL5-204ENST00000623364 PIK3C2AO00443 1686 aa10.15□□□□□ -0.78
CDKL5-204ENST00000623364 CPDO75976 1380 aa10.15□□□□□ -0.78
CDKL5-204ENST00000623364 DAPK1P53355 1430 aa10.15□□□□□ -0.79
CDKL5-204ENST00000623364 ANKARQ7Z5J8 1434 aa10.14□□□□□ -0.79
CDKL5-204ENST00000623364 ANKRD50Q9ULJ7 1429 aa10.14□□□□□ -0.79
CDKL5-204ENST00000623364 FCHSD2O94868 740 aa10.13□□□□□ -0.79
CDKL5-204ENST00000623364 KCNQ4P56696 695 aa10.13□□□□□ -0.79
CDKL5-204ENST00000623364 CHADLQ6NUI6 762 aa10.13□□□□□ -0.79
CDKL5-204ENST00000623364 NGDNQ8NEJ9 315 aaKnown RBP10.13□□□□□ -0.79
CDKL5-204ENST00000623364 ABCC11Q96J66 1382 aa10.13□□□□□ -0.79
CDKL5-204ENST00000623364 ZC3H4Q9UPT8 1303 aaKnown RBP10.12□□□□□ -0.79
CDKL5-204ENST00000623364 TMEM88BA6NKF7 163 aa10.12□□□□□ -0.79
CDKL5-204ENST00000623364 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms