RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 TRMT44Q8IYL2 757 aaKnown RBP7.26□□□□□ -1.25
ATRX-209ENST00000623242 CHIC2Q9UKJ5 165 aa7.26□□□□□ -1.25
ATRX-209ENST00000623242 GIGYF1O75420 1035 aaPredicted RBP7.25□□□□□ -1.25
ATRX-209ENST00000623242 SKIP12755 728 aa7.25□□□□□ -1.25
ATRX-209ENST00000623242 NFATC2IPQ8NCF5 419 aa7.25□□□□□ -1.25
ATRX-209ENST00000623242 CCDC85AQ96PX6 553 aaPredicted RBP7.25□□□□□ -1.25
ATRX-209ENST00000623242 USP17L5A8MUK1 530 aa7.24□□□□□ -1.25
ATRX-209ENST00000623242 ESPNB1AK53 854 aa7.24□□□□□ -1.25
ATRX-209ENST00000623242 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
ATRX-209ENST00000623242 RC3H1Q5TC82 1133 aaKnown RBP7.24□□□□□ -1.25
ATRX-209ENST00000623242 SLC10A4Q96EP9 437 aa7.24□□□□□ -1.25
ATRX-209ENST00000623242 USP17L3A6NCW0 530 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 USP17L4A6NCW7 530 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 SIAH2O43255 324 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 CD2BP2O95400 341 aaKnown RBP7.23□□□□□ -1.25
ATRX-209ENST00000623242 SLFNL1Q499Z3 407 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 KANK4Q5T7N3 995 aaPredicted RBP7.23□□□□□ -1.25
ATRX-209ENST00000623242 SPRYD7Q5W111 196 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 TRAF7Q6Q0C0 670 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 USP17L2Q6R6M4 530 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 USP17L1Q7RTZ2 530 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 RNF135Q8IUD6 432 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 DEPDC4Q8N2C3 294 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 PBXIP1Q96AQ6 731 aa7.23□□□□□ -1.25
ATRX-209ENST00000623242 PPP1R15AO75807 674 aaPredicted RBP7.22□□□□□ -1.25
ATRX-209ENST00000623242 ZNF697Q5TEC3 545 aa7.22□□□□□ -1.25
ATRX-209ENST00000623242 ZNF598Q86UK7 904 aaKnown RBP7.22□□□□□ -1.25
ATRX-209ENST00000623242 PLEKHM2Q8IWE5 1019 aa7.22□□□□□ -1.25
ATRX-209ENST00000623242 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
ATRX-209ENST00000623242 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
ATRX-209ENST00000623242 ZNF592Q92610 1267 aa7.22□□□□□ -1.25
ATRX-209ENST00000623242 CDCA7Q9BWT1 371 aaPredicted RBP7.21□□□□□ -1.26
ATRX-209ENST00000623242 MAP4K5Q9Y4K4 846 aa7.21□□□□□ -1.26
ATRX-209ENST00000623242 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
ATRX-209ENST00000623242 WNT7AO00755 349 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 PRR20EP86478 221 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 PRR20CP86479 221 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 PRR20DP86480 221 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 PRR20BP86481 221 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 PRR20AP86496 221 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 NCOA4Q13772 614 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 RETREG2Q8NC44 543 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 CDK15Q96Q40 435 aa7.2□□□□□ -1.26
ATRX-209ENST00000623242 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
ATRX-209ENST00000623242 TNFRSF10AO00220 468 aa7.19□□□□□ -1.26
ATRX-209ENST00000623242 LCE2BO14633 110 aa7.19□□□□□ -1.26
ATRX-209ENST00000623242 GRM5P41594 1212 aa7.19□□□□□ -1.26
ATRX-209ENST00000623242 NBPF20Q3BBV1 942 aa7.19□□□□□ -1.26
ATRX-209ENST00000623242 INTS6LQ5JSJ4 861 aaKnown RBP7.19□□□□□ -1.26
ATRX-209ENST00000623242 TRIM67Q6ZTA4 783 aa7.19□□□□□ -1.26
ATRX-209ENST00000623242 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
ATRX-209ENST00000623242 CDV3Q9UKY7 258 aaKnown RBP7.19□□□□□ -1.26
ATRX-209ENST00000623242 ZCCHC6Q5VYS8 1495 aaKnown RBP7.18□□□□□ -1.26
ATRX-209ENST00000623242 RAB15P59190 212 aa7.18□□□□□ -1.26
ATRX-209ENST00000623242 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
ATRX-209ENST00000623242 VASH1Q7L8A9 365 aaPredicted RBP7.18□□□□□ -1.26
ATRX-209ENST00000623242 MPNDQ8N594 471 aa7.18□□□□□ -1.26
ATRX-209ENST00000623242 DOLKQ9UPQ8 538 aa7.18□□□□□ -1.26
ATRX-209ENST00000623242 ATG7O95352 703 aa7.17□□□□□ -1.26
ATRX-209ENST00000623242 FOXC1Q12948 553 aa7.17□□□□□ -1.26
ATRX-209ENST00000623242 ARID5BQ14865 1188 aa7.17□□□□□ -1.26
ATRX-209ENST00000623242 PKDCCQ504Y2 493 aa7.17□□□□□ -1.26
ATRX-209ENST00000623242 SEPT12Q8IYM1 358 aa7.17□□□□□ -1.26
ATRX-209ENST00000623242 VRTNQ9H8Y1 702 aa7.17□□□□□ -1.26
ATRX-209ENST00000623242 MKRN1Q9UHC7 482 aaKnown RBP7.17□□□□□ -1.26
ATRX-209ENST00000623242 CARNS1A5YM72 827 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 ERVH48-1M5A8F1 160 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 FSHRP23945 695 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 CRTC2Q53ET0 693 aaPredicted RBP7.16□□□□□ -1.26
ATRX-209ENST00000623242 OXLD1Q5BKU9 147 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 RNF20Q5VTR2 975 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 ZMIZ1Q9ULJ6 1067 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 PCDHB11Q9Y5F2 797 aa7.16□□□□□ -1.26
ATRX-209ENST00000623242 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
ATRX-209ENST00000623242 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.26
ATRX-209ENST00000623242 NR3C2P08235 984 aa7.15□□□□□ -1.26
ATRX-209ENST00000623242 SCTRP47872 440 aa7.15□□□□□ -1.26
ATRX-209ENST00000623242 EML3Q32P44 896 aa7.15□□□□□ -1.26
ATRX-209ENST00000623242 TMPRSS4Q9NRS4 437 aa7.15□□□□□ -1.26
ATRX-209ENST00000623242 ZBTB7BO15156 539 aaPredicted RBP7.14□□□□□ -1.27
ATRX-209ENST00000623242 GDF9O60383 454 aa7.14□□□□□ -1.27
ATRX-209ENST00000623242 ADH1CP00326 375 aa7.14□□□□□ -1.27
ATRX-209ENST00000623242 CLDN10P78369 228 aa7.14□□□□□ -1.27
ATRX-209ENST00000623242 PTK7Q13308 1070 aa7.14□□□□□ -1.27
ATRX-209ENST00000623242 ACIN1Q9UKV3 1341 aaKnown RBP7.14□□□□□ -1.27
ATRX-209ENST00000623242 KIAA1024Q9UPX6 916 aa7.14□□□□□ -1.27
ATRX-209ENST00000623242 TMEM88BA6NKF7 163 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L10C9JJH3 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L12C9JPN9 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L21D6R901 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
ATRX-209ENST00000623242 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms