RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 USP54Q70EL1 1684 aa18.29■□□□□ 0.52
ATRX-208ENST00000622960 CD163L1Q9NR16 1453 aa18.29■□□□□ 0.52
ATRX-208ENST00000622960 FAM196AQ6ZSG2 479 aa18.29■□□□□ 0.52
ATRX-208ENST00000622960 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
ATRX-208ENST00000622960 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
ATRX-208ENST00000622960 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
ATRX-208ENST00000622960 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
ATRX-208ENST00000622960 TESK2Q96S53 571 aa18.28■□□□□ 0.52
ATRX-208ENST00000622960 NFAT5O94916 1531 aa18.28■□□□□ 0.52
ATRX-208ENST00000622960 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.52
ATRX-208ENST00000622960 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.52
ATRX-208ENST00000622960 C11orf95C9JLR9 678 aaPredicted RBP18.27■□□□□ 0.52
ATRX-208ENST00000622960 FAM182BQ5T319 152 aa18.27■□□□□ 0.52
ATRX-208ENST00000622960 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
ATRX-208ENST00000622960 NME9Q86XW9 330 aa18.26■□□□□ 0.51
ATRX-208ENST00000622960 COL18A1P39060 1754 aa18.25■□□□□ 0.51
ATRX-208ENST00000622960 CDCA7Q9BWT1 371 aaPredicted RBP18.25■□□□□ 0.51
ATRX-208ENST00000622960 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
ATRX-208ENST00000622960 LTN1O94822 1766 aa18.24■□□□□ 0.51
ATRX-208ENST00000622960 COG3Q96JB2 828 aa18.23■□□□□ 0.51
ATRX-208ENST00000622960 WNK3Q9BYP7 1800 aa18.23■□□□□ 0.51
ATRX-208ENST00000622960 TNS1Q9HBL0 1735 aaKnown RBP18.23■□□□□ 0.51
ATRX-208ENST00000622960 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 DDB1Q16531 1140 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 LRRC37A3O60309 1634 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
ATRX-208ENST00000622960 AXIN2Q9Y2T1 843 aa18.21■□□□□ 0.51
ATRX-208ENST00000622960 TRIM37O94972 964 aa18.2■□□□□ 0.5
ATRX-208ENST00000622960 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
ATRX-208ENST00000622960 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
ATRX-208ENST00000622960 PARD3Q8TEW0 1356 aa18.18■□□□□ 0.5
ATRX-208ENST00000622960 APBA3O96018 575 aa18.18■□□□□ 0.5
ATRX-208ENST00000622960 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
ATRX-208ENST00000622960 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
ATRX-208ENST00000622960 ERBB3P21860 1342 aa18.17■□□□□ 0.5
ATRX-208ENST00000622960 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
ATRX-208ENST00000622960 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
ATRX-208ENST00000622960 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.5
ATRX-208ENST00000622960 EXOC5O00471 708 aa18.14■□□□□ 0.49
ATRX-208ENST00000622960 AMPHP49418 695 aa18.14■□□□□ 0.49
ATRX-208ENST00000622960 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.49
ATRX-208ENST00000622960 TNS2Q63HR2 1409 aa18.13■□□□□ 0.49
ATRX-208ENST00000622960 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
ATRX-208ENST00000622960 EZH2Q15910 746 aaKnown RBP18.12■□□□□ 0.49
ATRX-208ENST00000622960 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
ATRX-208ENST00000622960 RTL1A6NKG5 1358 aa18.12■□□□□ 0.49
ATRX-208ENST00000622960 SMG6Q86US8 1419 aaKnown RBP18.12■□□□□ 0.49
ATRX-208ENST00000622960 MYOM1P52179 1685 aa18.12■□□□□ 0.49
ATRX-208ENST00000622960 IL2RBP14784 551 aa18.11■□□□□ 0.49
ATRX-208ENST00000622960 IP6K1Q92551 441 aa18.11■□□□□ 0.49
ATRX-208ENST00000622960 PEAK1Q9H792 1746 aa18.11■□□□□ 0.49
ATRX-208ENST00000622960 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
ATRX-208ENST00000622960 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
ATRX-208ENST00000622960 LTV1Q96GA3 475 aaPredicted RBP18.09■□□□□ 0.49
ATRX-208ENST00000622960 CAMKK2Q96RR4 588 aa18.09■□□□□ 0.49
ATRX-208ENST00000622960 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
ATRX-208ENST00000622960 RREB1Q92766 1687 aa18.09■□□□□ 0.49
ATRX-208ENST00000622960 NSD3Q9BZ95 1437 aa18.08■□□□□ 0.49
ATRX-208ENST00000622960 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
ATRX-208ENST00000622960 RGPD3A6NKT7 1758 aaPredicted RBP18.08■□□□□ 0.48
ATRX-208ENST00000622960 RGPD4Q7Z3J3 1758 aa18.08■□□□□ 0.48
ATRX-208ENST00000622960 BCL9O00512 1426 aa18.07■□□□□ 0.48
ATRX-208ENST00000622960 FYB1O15117 783 aa18.07■□□□□ 0.48
ATRX-208ENST00000622960 HOXC9P31274 260 aa18.07■□□□□ 0.48
ATRX-208ENST00000622960 MARCH10Q8NA82 808 aaPredicted RBP18.07■□□□□ 0.48
ATRX-208ENST00000622960 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
ATRX-208ENST00000622960 SBF2Q86WG5 1849 aa18.07■□□□□ 0.48
ATRX-208ENST00000622960 R3HDM1Q15032 1099 aaKnown RBP18.06■□□□□ 0.48
ATRX-208ENST00000622960 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
ATRX-208ENST00000622960 LRP5O75197 1615 aa18.05■□□□□ 0.48
ATRX-208ENST00000622960 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
ATRX-208ENST00000622960 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
ATRX-208ENST00000622960 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
ATRX-208ENST00000622960 FLT4P35916 1363 aa18.03■□□□□ 0.48
ATRX-208ENST00000622960 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
ATRX-208ENST00000622960 PLSCR1O15162 318 aa18.02■□□□□ 0.48
ATRX-208ENST00000622960 NHSQ6T4R5 1651 aa18.02■□□□□ 0.47
ATRX-208ENST00000622960 FBLN1P23142 703 aa17.99■□□□□ 0.47
ATRX-208ENST00000622960 RAPGEF4Q8WZA2 1011 aa17.99■□□□□ 0.47
ATRX-208ENST00000622960 CARD14Q9BXL6 1004 aa17.99■□□□□ 0.47
ATRX-208ENST00000622960 INSRP06213 1382 aa17.99■□□□□ 0.47
ATRX-208ENST00000622960 DDX54Q8TDD1 881 aaKnown RBP17.98■□□□□ 0.47
ATRX-208ENST00000622960 ACSBG1Q96GR2 724 aa17.98■□□□□ 0.47
ATRX-208ENST00000622960 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
ATRX-208ENST00000622960 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
ATRX-208ENST00000622960 RGPD2P0DJD1 1756 aa17.95■□□□□ 0.46
ATRX-208ENST00000622960 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
ATRX-208ENST00000622960 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
ATRX-208ENST00000622960 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
ATRX-208ENST00000622960 MEGF6O75095 1541 aa17.93■□□□□ 0.46
ATRX-208ENST00000622960 NSD2O96028 1365 aa17.93■□□□□ 0.46
ATRX-208ENST00000622960 KCNQ2O43526 872 aa17.93■□□□□ 0.46
ATRX-208ENST00000622960 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
ATRX-208ENST00000622960 SYTL4Q96C24 671 aaPredicted RBP17.93■□□□□ 0.46
ATRX-208ENST00000622960 STK32BQ9NY57 414 aa17.93■□□□□ 0.46
ATRX-208ENST00000622960 EMILIN1Q9Y6C2 1016 aa17.93■□□□□ 0.46
ATRX-208ENST00000622960 BTAF1O14981 1849 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms