RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 C17orf53Q8N3J3 647 aaPredicted RBP26.82■■□□□ 1.88
PCSK6-220ENST00000622483 WAPLQ7Z5K2 1190 aa26.81■■□□□ 1.88
PCSK6-220ENST00000622483 CHD1LQ86WJ1 897 aa26.81■■□□□ 1.88
PCSK6-220ENST00000622483 MADDQ8WXG6 1647 aa26.81■■□□□ 1.88
PCSK6-220ENST00000622483 HDAC1Q13547 482 aaPredicted RBP26.81■■□□□ 1.88
PCSK6-220ENST00000622483 DDX19BQ9UMR2 479 aa26.81■■□□□ 1.88
PCSK6-220ENST00000622483 LMBRD1Q9NUN5 540 aa26.8■■□□□ 1.88
PCSK6-220ENST00000622483 DYNC1I1O14576 645 aa26.8■■□□□ 1.88
PCSK6-220ENST00000622483 LMTK2Q8IWU2 1503 aa26.79■■□□□ 1.88
PCSK6-220ENST00000622483 FGD1P98174 961 aa26.79■■□□□ 1.88
PCSK6-220ENST00000622483 ZGPATQ8N5A5 531 aaKnown RBP26.79■■□□□ 1.88
PCSK6-220ENST00000622483 GPT2Q8TD30 523 aa26.79■■□□□ 1.88
PCSK6-220ENST00000622483 ATF7IPQ6VMQ6 1270 aa26.79■■□□□ 1.88
PCSK6-220ENST00000622483 KIF1BO60333 1816 aa26.78■■□□□ 1.88
PCSK6-220ENST00000622483 TERF1P54274 439 aa26.78■■□□□ 1.88
PCSK6-220ENST00000622483 NUCB1Q02818 461 aa26.77■■□□□ 1.88
PCSK6-220ENST00000622483 SLC26A8Q96RN1 970 aa26.77■■□□□ 1.88
PCSK6-220ENST00000622483 ZNF445P59923 1031 aa26.77■■□□□ 1.88
PCSK6-220ENST00000622483 SASS6Q6UVJ0 657 aa26.77■■□□□ 1.88
PCSK6-220ENST00000622483 WDR63Q8IWG1 891 aa26.77■■□□□ 1.88
PCSK6-220ENST00000622483 PRAM1Q96QH2 718 aa26.77■■□□□ 1.88
PCSK6-220ENST00000622483 SPDYE4A6NLX3 237 aa26.76■■□□□ 1.88
PCSK6-220ENST00000622483 PTMSP20962 102 aa26.76■■□□□ 1.88
PCSK6-220ENST00000622483 SCAF11Q99590 1463 aaKnown RBP26.76■■□□□ 1.87
PCSK6-220ENST00000622483 U2SURPO15042 1029 aaKnown RBP26.76■■□□□ 1.87
PCSK6-220ENST00000622483 ZSCAN20P17040 1043 aaPredicted RBP26.76■■□□□ 1.87
PCSK6-220ENST00000622483 TMEM63CQ9P1W3 806 aa26.76■■□□□ 1.87
PCSK6-220ENST00000622483 CLTCQ00610 1675 aaKnown RBP26.75■■□□□ 1.87
PCSK6-220ENST00000622483 SRPK2P78362 688 aaKnown RBP26.74■■□□□ 1.87
PCSK6-220ENST00000622483 PDLIM2Q96JY6 352 aa26.74■■□□□ 1.87
PCSK6-220ENST00000622483 NGEFQ8N5V2 710 aa26.74■■□□□ 1.87
PCSK6-220ENST00000622483 CCDC94Q9BW85 323 aaPredicted RBP26.74■■□□□ 1.87
PCSK6-220ENST00000622483 ZBTB40Q9NUA8 1239 aa26.73■■□□□ 1.87
PCSK6-220ENST00000622483 TXNDC2Q86VQ3 553 aa26.72■■□□□ 1.87
PCSK6-220ENST00000622483 KIF16BQ96L93 1317 aa26.72■■□□□ 1.87
PCSK6-220ENST00000622483 RBM33Q96EV2 1170 aaKnown RBP26.72■■□□□ 1.87
PCSK6-220ENST00000622483 DMTNQ08495 405 aa26.71■■□□□ 1.87
PCSK6-220ENST00000622483 ADGRB3O60242 1522 aa26.71■■□□□ 1.87
PCSK6-220ENST00000622483 ERVK-7P63135 1459 aa26.71■■□□□ 1.87
PCSK6-220ENST00000622483 CSPP1Q1MSJ5 1256 aa26.7■■□□□ 1.87
PCSK6-220ENST00000622483 APBB1O00213 710 aa26.7■■□□□ 1.86
PCSK6-220ENST00000622483 BBXQ8WY36 941 aaPredicted RBP26.7■■□□□ 1.86
PCSK6-220ENST00000622483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.7■■□□□ 1.86
PCSK6-220ENST00000622483 BMP2KLQ5H9B9 411 aa26.69■■□□□ 1.86
PCSK6-220ENST00000622483 ATP2B3Q16720 1220 aa26.69■■□□□ 1.86
PCSK6-220ENST00000622483 NOL8Q76FK4 1167 aaKnown RBP26.69■■□□□ 1.86
PCSK6-220ENST00000622483 PPP4R3BQ5MIZ7 849 aa26.68■■□□□ 1.86
PCSK6-220ENST00000622483 ELL2O00472 640 aaPredicted RBP26.68■■□□□ 1.86
PCSK6-220ENST00000622483 HS1BP3Q53T59 392 aa26.68■■□□□ 1.86
PCSK6-220ENST00000622483 ZNF710Q8N1W2 664 aa26.68■■□□□ 1.86
PCSK6-220ENST00000622483 POLR3AO14802 1390 aaPredicted RBP26.67■■□□□ 1.86
PCSK6-220ENST00000622483 MYO5BQ9ULV0 1848 aa26.67■■□□□ 1.86
PCSK6-220ENST00000622483 CCDC39Q9UFE4 941 aa26.67■■□□□ 1.86
PCSK6-220ENST00000622483 PHF23Q9BUL5 403 aaPredicted RBP26.67■■□□□ 1.86
PCSK6-220ENST00000622483 BCL11BQ9C0K0 894 aaPredicted RBP26.66■■□□□ 1.86
PCSK6-220ENST00000622483 NCKAP5LQ9HCH0 1330 aa26.66■■□□□ 1.86
PCSK6-220ENST00000622483 NSD3Q9BZ95 1437 aa26.66■■□□□ 1.86
PCSK6-220ENST00000622483 LTKP29376 864 aa26.65■■□□□ 1.86
PCSK6-220ENST00000622483 PLCB2Q00722 1185 aa26.65■■□□□ 1.86
PCSK6-220ENST00000622483 MTERF4Q7Z6M4 381 aaKnown RBP26.65■■□□□ 1.86
PCSK6-220ENST00000622483 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
PCSK6-220ENST00000622483 TTC12Q9H892 705 aaPredicted RBP26.65■■□□□ 1.86
PCSK6-220ENST00000622483 NPC1L1Q9UHC9 1359 aa26.65■■□□□ 1.86
PCSK6-220ENST00000622483 ARHGAP31Q2M1Z3 1444 aa26.65■■□□□ 1.86
PCSK6-220ENST00000622483 KIAA2012Q0VF49 1180 aa26.64■■□□□ 1.85
PCSK6-220ENST00000622483 GDPD2Q9HCC8 539 aa26.64■■□□□ 1.85
PCSK6-220ENST00000622483 IBTKQ9P2D0 1353 aaPredicted RBP26.64■■□□□ 1.85
PCSK6-220ENST00000622483 STAC3Q96MF2 364 aa26.63■■□□□ 1.85
PCSK6-220ENST00000622483 ARHGEF40Q8TER5 1519 aa26.63■■□□□ 1.85
PCSK6-220ENST00000622483 LRSAM1Q6UWE0 723 aa26.63■■□□□ 1.85
PCSK6-220ENST00000622483 PIK3C2BO00750 1634 aa26.62■■□□□ 1.85
PCSK6-220ENST00000622483 NUCB2P80303 420 aa26.62■■□□□ 1.85
PCSK6-220ENST00000622483 CFAP53Q96M91 514 aa26.62■■□□□ 1.85
PCSK6-220ENST00000622483 ZDHHC9Q9Y397 364 aa26.62■■□□□ 1.85
PCSK6-220ENST00000622483 C16orf71Q8IYS4 520 aaPredicted RBP26.61■■□□□ 1.85
PCSK6-220ENST00000622483 PREX1Q8TCU6 1659 aa26.61■■□□□ 1.85
PCSK6-220ENST00000622483 MAPK8IP2Q13387 824 aaPredicted RBP26.61■■□□□ 1.85
PCSK6-220ENST00000622483 LAMC1P11047 1609 aa26.61■■□□□ 1.85
PCSK6-220ENST00000622483 TNRQ92752 1358 aa26.61■■□□□ 1.85
PCSK6-220ENST00000622483 FBLN1P23142 703 aa26.59■■□□□ 1.85
PCSK6-220ENST00000622483 MYOM2P54296 1465 aa26.59■■□□□ 1.85
PCSK6-220ENST00000622483 MYOM1P52179 1685 aa26.59■■□□□ 1.85
PCSK6-220ENST00000622483 RIMS2Q9UQ26 1411 aa26.59■■□□□ 1.85
PCSK6-220ENST00000622483 GSPT1P15170 499 aaKnown RBP26.59■■□□□ 1.85
PCSK6-220ENST00000622483 ATAD2Q6PL18 1390 aa26.58■■□□□ 1.85
PCSK6-220ENST00000622483 ZBTB22O15209 634 aa26.58■■□□□ 1.85
PCSK6-220ENST00000622483 MYRIPQ8NFW9 859 aa26.58■■□□□ 1.85
PCSK6-220ENST00000622483 NEXMIFQ5QGS0 1516 aa26.58■■□□□ 1.85
PCSK6-220ENST00000622483 CLEC17AQ6ZS10 378 aa26.58■■□□□ 1.85
PCSK6-220ENST00000622483 CDC45O75419 566 aa26.56■■□□□ 1.84
PCSK6-220ENST00000622483 USP25Q9UHP3 1055 aa26.56■■□□□ 1.84
PCSK6-220ENST00000622483 VGLL3A8MV65 326 aa26.56■■□□□ 1.84
PCSK6-220ENST00000622483 OTUD7AQ8TE49 926 aaPredicted RBP26.55■■□□□ 1.84
PCSK6-220ENST00000622483 METP08581 1390 aa26.55■■□□□ 1.84
PCSK6-220ENST00000622483 A2ML1A8K2U0 1454 aa26.55■■□□□ 1.84
PCSK6-220ENST00000622483 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
PCSK6-220ENST00000622483 CYP2E1P05181 493 aaPredicted RBP26.54■■□□□ 1.84
PCSK6-220ENST00000622483 U2AF2P26368 475 aaKnown RBP eCLIP26.54■■□□□ 1.842e-6■■■□□ 14.8
PCSK6-220ENST00000622483 TMPOP42166 694 aaKnown RBP26.54■■□□□ 1.84
PCSK6-220ENST00000622483 SIRT2Q8IXJ6 389 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms