RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 USP54Q70EL1 1684 aa17.48■□□□□ 0.39
LINC00963-213ENST00000622120 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
LINC00963-213ENST00000622120 CRB1P82279 1406 aa17.47■□□□□ 0.39
LINC00963-213ENST00000622120 NFAT5O94916 1531 aa17.47■□□□□ 0.39
LINC00963-213ENST00000622120 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
LINC00963-213ENST00000622120 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
LINC00963-213ENST00000622120 PDE3BQ13370 1112 aa17.45■□□□□ 0.38
LINC00963-213ENST00000622120 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
LINC00963-213ENST00000622120 AXIN2Q9Y2T1 843 aa17.45■□□□□ 0.38
LINC00963-213ENST00000622120 RGPD1P0DJD0 1748 aa17.44■□□□□ 0.38
LINC00963-213ENST00000622120 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
LINC00963-213ENST00000622120 WDR17Q8IZU2 1322 aa17.44■□□□□ 0.38
LINC00963-213ENST00000622120 LTN1O94822 1766 aa17.43■□□□□ 0.38
LINC00963-213ENST00000622120 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
LINC00963-213ENST00000622120 BAG6P46379 1132 aa17.43■□□□□ 0.38
LINC00963-213ENST00000622120 FAM196AQ6ZSG2 479 aa17.43■□□□□ 0.38
LINC00963-213ENST00000622120 ABCC6O95255 1503 aa17.42■□□□□ 0.38
LINC00963-213ENST00000622120 PARP4Q9UKK3 1724 aaKnown RBP17.42■□□□□ 0.38
LINC00963-213ENST00000622120 ANKRD36BQ8N2N9 1353 aa17.41■□□□□ 0.38
LINC00963-213ENST00000622120 COG3Q96JB2 828 aa17.4■□□□□ 0.38
LINC00963-213ENST00000622120 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
LINC00963-213ENST00000622120 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.38
LINC00963-213ENST00000622120 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.38
LINC00963-213ENST00000622120 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
LINC00963-213ENST00000622120 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
LINC00963-213ENST00000622120 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
LINC00963-213ENST00000622120 TRIM37O94972 964 aa17.37■□□□□ 0.37
LINC00963-213ENST00000622120 DDB1Q16531 1140 aa17.37■□□□□ 0.37
LINC00963-213ENST00000622120 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
LINC00963-213ENST00000622120 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
LINC00963-213ENST00000622120 LRRC37A3O60309 1634 aa17.36■□□□□ 0.37
LINC00963-213ENST00000622120 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
LINC00963-213ENST00000622120 ERBB3P21860 1342 aa17.34■□□□□ 0.37
LINC00963-213ENST00000622120 MYOM1P52179 1685 aa17.34■□□□□ 0.37
LINC00963-213ENST00000622120 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.371e-7■■■■□ 25.4
LINC00963-213ENST00000622120 ANKRD24Q8TF21 1146 aa17.34■□□□□ 0.37
LINC00963-213ENST00000622120 KIF20BQ96Q89 1820 aa17.34■□□□□ 0.37
LINC00963-213ENST00000622120 NLRP2Q9NX02 1062 aa17.34■□□□□ 0.37
LINC00963-213ENST00000622120 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.36
LINC00963-213ENST00000622120 DISP2A7MBM2 1401 aa17.33■□□□□ 0.36
LINC00963-213ENST00000622120 APBA3O96018 575 aa17.33■□□□□ 0.36
LINC00963-213ENST00000622120 FYB1O15117 783 aa17.32■□□□□ 0.36
LINC00963-213ENST00000622120 IP6K1Q92551 441 aa17.32■□□□□ 0.36
LINC00963-213ENST00000622120 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
LINC00963-213ENST00000622120 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
LINC00963-213ENST00000622120 EXOC5O00471 708 aa17.31■□□□□ 0.36
LINC00963-213ENST00000622120 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
LINC00963-213ENST00000622120 AMPHP49418 695 aa17.31■□□□□ 0.36
LINC00963-213ENST00000622120 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
LINC00963-213ENST00000622120 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
LINC00963-213ENST00000622120 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
LINC00963-213ENST00000622120 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
LINC00963-213ENST00000622120 EZH2Q15910 746 aaKnown RBP17.29■□□□□ 0.36
LINC00963-213ENST00000622120 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
LINC00963-213ENST00000622120 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
LINC00963-213ENST00000622120 IL2RBP14784 551 aa17.28■□□□□ 0.36
LINC00963-213ENST00000622120 FBLN1P23142 703 aa17.28■□□□□ 0.36
LINC00963-213ENST00000622120 HOXC9P31274 260 aa17.28■□□□□ 0.36
LINC00963-213ENST00000622120 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
LINC00963-213ENST00000622120 CAMKK2Q96RR4 588 aa17.28■□□□□ 0.36
LINC00963-213ENST00000622120 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
LINC00963-213ENST00000622120 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.36
LINC00963-213ENST00000622120 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
LINC00963-213ENST00000622120 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
LINC00963-213ENST00000622120 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
LINC00963-213ENST00000622120 TNS2Q63HR2 1409 aa17.26■□□□□ 0.35
LINC00963-213ENST00000622120 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
LINC00963-213ENST00000622120 BCL9O00512 1426 aa17.24■□□□□ 0.35
LINC00963-213ENST00000622120 BCL11BQ9C0K0 894 aaPredicted RBP17.24■□□□□ 0.35
LINC00963-213ENST00000622120 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
LINC00963-213ENST00000622120 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
LINC00963-213ENST00000622120 RREB1Q92766 1687 aa17.23■□□□□ 0.35
LINC00963-213ENST00000622120 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
LINC00963-213ENST00000622120 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
LINC00963-213ENST00000622120 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
LINC00963-213ENST00000622120 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
LINC00963-213ENST00000622120 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
LINC00963-213ENST00000622120 FLT4P35916 1363 aa17.2■□□□□ 0.34
LINC00963-213ENST00000622120 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
LINC00963-213ENST00000622120 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
LINC00963-213ENST00000622120 KIF24Q5T7B8 1368 aa17.19■□□□□ 0.34
LINC00963-213ENST00000622120 PLSCR1O15162 318 aa17.19■□□□□ 0.34
LINC00963-213ENST00000622120 INSRP06213 1382 aa17.18■□□□□ 0.34
LINC00963-213ENST00000622120 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
LINC00963-213ENST00000622120 PANK3Q9H999 370 aa17.18■□□□□ 0.34
LINC00963-213ENST00000622120 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
LINC00963-213ENST00000622120 NHSQ6T4R5 1651 aa17.17■□□□□ 0.34
LINC00963-213ENST00000622120 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
LINC00963-213ENST00000622120 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
LINC00963-213ENST00000622120 ACSBG1Q96GR2 724 aa17.17■□□□□ 0.34
LINC00963-213ENST00000622120 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
LINC00963-213ENST00000622120 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
LINC00963-213ENST00000622120 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
LINC00963-213ENST00000622120 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
LINC00963-213ENST00000622120 LRP5O75197 1615 aa17.15■□□□□ 0.34
LINC00963-213ENST00000622120 KCNQ2O43526 872 aa17.15■□□□□ 0.34
LINC00963-213ENST00000622120 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
LINC00963-213ENST00000622120 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
LINC00963-213ENST00000622120 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
LINC00963-213ENST00000622120 MEGF6O75095 1541 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 290.5 ms