RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 RGPD5Q99666 1765 aa25.21■■□□□ 1.63
SCAMP4-213ENST00000621748 TMF1P82094 1093 aa25.2■■□□□ 1.62
SCAMP4-213ENST00000621748 USP54Q70EL1 1684 aa25.2■■□□□ 1.62
SCAMP4-213ENST00000621748 NINLQ9Y2I6 1382 aa25.19■■□□□ 1.62
SCAMP4-213ENST00000621748 THRAP3Q9Y2W1 955 aaKnown RBP25.19■■□□□ 1.62
SCAMP4-213ENST00000621748 CRB1P82279 1406 aa25.19■■□□□ 1.62
SCAMP4-213ENST00000621748 SF3B2Q13435 895 aaKnown RBP25.18■■□□□ 1.62
SCAMP4-213ENST00000621748 WDR17Q8IZU2 1322 aa25.15■■□□□ 1.62
SCAMP4-213ENST00000621748 TOM1L2Q6ZVM7 507 aa25.15■■□□□ 1.62
SCAMP4-213ENST00000621748 PDE3BQ13370 1112 aa25.13■■□□□ 1.61
SCAMP4-213ENST00000621748 OVOS2A0A0J9YW53 1432 aa25.12■■□□□ 1.61
SCAMP4-213ENST00000621748 OVOS2Q6IE36 1432 aa25.12■■□□□ 1.61
SCAMP4-213ENST00000621748 ANKRD36BQ8N2N9 1353 aa25.11■■□□□ 1.61
SCAMP4-213ENST00000621748 FAM196AQ6ZSG2 479 aa25.11■■□□□ 1.61
SCAMP4-213ENST00000621748 PARP4Q9UKK3 1724 aaKnown RBP25.11■■□□□ 1.61
SCAMP4-213ENST00000621748 LTN1O94822 1766 aa25.1■■□□□ 1.61
SCAMP4-213ENST00000621748 RGPD1P0DJD0 1748 aa25.09■■□□□ 1.61
SCAMP4-213ENST00000621748 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
SCAMP4-213ENST00000621748 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
SCAMP4-213ENST00000621748 ABCC6O95255 1503 aa25.08■■□□□ 1.61
SCAMP4-213ENST00000621748 BAG6P46379 1132 aa25.08■■□□□ 1.61
SCAMP4-213ENST00000621748 CARD10Q9BWT7 1032 aa25.08■■□□□ 1.61
SCAMP4-213ENST00000621748 TRIM37O94972 964 aa25.07■■□□□ 1.6
SCAMP4-213ENST00000621748 TNS1Q9HBL0 1735 aaKnown RBP25.06■■□□□ 1.6
SCAMP4-213ENST00000621748 EN1Q05925 392 aaPredicted RBP25.05■■□□□ 1.6
SCAMP4-213ENST00000621748 COG3Q96JB2 828 aa25.05■■□□□ 1.6
SCAMP4-213ENST00000621748 WNK3Q9BYP7 1800 aa25.05■■□□□ 1.6
SCAMP4-213ENST00000621748 FYB1O15117 783 aa25.03■■□□□ 1.6
SCAMP4-213ENST00000621748 FBLN1P23142 703 aa25.03■■□□□ 1.6
SCAMP4-213ENST00000621748 DDB1Q16531 1140 aa25.03■■□□□ 1.6
SCAMP4-213ENST00000621748 LRRC37A3O60309 1634 aa25.03■■□□□ 1.6
SCAMP4-213ENST00000621748 ERBB3P21860 1342 aa25.03■■□□□ 1.6
SCAMP4-213ENST00000621748 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
SCAMP4-213ENST00000621748 MYOM1P52179 1685 aa25.01■■□□□ 1.59
SCAMP4-213ENST00000621748 CDCA7Q9BWT1 371 aaPredicted RBP25.01■■□□□ 1.59
SCAMP4-213ENST00000621748 DISP2A7MBM2 1401 aa25.01■■□□□ 1.59
SCAMP4-213ENST00000621748 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
SCAMP4-213ENST00000621748 IP6K1Q92551 441 aa25■■□□□ 1.59
SCAMP4-213ENST00000621748 CARD14Q9BXL6 1004 aa25■■□□□ 1.59
SCAMP4-213ENST00000621748 GGNBP2Q9H3C7 697 aa25■■□□□ 1.59
SCAMP4-213ENST00000621748 CCDC7Q96M83 1385 aa25■■□□□ 1.59
SCAMP4-213ENST00000621748 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
SCAMP4-213ENST00000621748 PEAK1Q9H792 1746 aa24.99■■□□□ 1.59
SCAMP4-213ENST00000621748 NLRP2Q9NX02 1062 aa24.99■■□□□ 1.59
SCAMP4-213ENST00000621748 MAP3K19Q56UN5 1328 aa24.98■■□□□ 1.59
SCAMP4-213ENST00000621748 APBA3O96018 575 aa24.98■■□□□ 1.59
SCAMP4-213ENST00000621748 HSPA5P11021 654 aaKnown RBP24.98■■□□□ 1.59
SCAMP4-213ENST00000621748 EZH2Q15910 746 aaKnown RBP24.97■■□□□ 1.59
SCAMP4-213ENST00000621748 MARCH10Q8NA82 808 aaPredicted RBP24.97■■□□□ 1.59
SCAMP4-213ENST00000621748 OVOS2A0A0G2JMS6 1433 aa24.96■■□□□ 1.59
SCAMP4-213ENST00000621748 CAMKK2Q96RR4 588 aa24.96■■□□□ 1.59
SCAMP4-213ENST00000621748 SBF2Q86WG5 1849 aa24.95■■□□□ 1.58
SCAMP4-213ENST00000621748 KIF20BQ96Q89 1820 aa24.94■■□□□ 1.58
SCAMP4-213ENST00000621748 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
SCAMP4-213ENST00000621748 EXOC5O00471 708 aa24.94■■□□□ 1.58
SCAMP4-213ENST00000621748 LTV1Q96GA3 475 aaPredicted RBP24.94■■□□□ 1.58
SCAMP4-213ENST00000621748 HOXC9P31274 260 aa24.93■■□□□ 1.58
SCAMP4-213ENST00000621748 AMPHP49418 695 aa24.93■■□□□ 1.58
SCAMP4-213ENST00000621748 RRS1Q15050 365 aaKnown RBP24.93■■□□□ 1.58
SCAMP4-213ENST00000621748 POLR3GLQ9BT43 218 aa24.93■■□□□ 1.58
SCAMP4-213ENST00000621748 NSD3Q9BZ95 1437 aa24.93■■□□□ 1.58
SCAMP4-213ENST00000621748 IL2RBP14784 551 aa24.9■■□□□ 1.58
SCAMP4-213ENST00000621748 PTF1AQ7RTS3 328 aa24.9■■□□□ 1.58
SCAMP4-213ENST00000621748 PSDA5PKW4 1024 aaPredicted RBP24.89■■□□□ 1.58
SCAMP4-213ENST00000621748 TNS2Q63HR2 1409 aa24.88■■□□□ 1.57
SCAMP4-213ENST00000621748 BCL9O00512 1426 aa24.87■■□□□ 1.57
SCAMP4-213ENST00000621748 PARD3Q8TEW0 1356 aa24.87■■□□□ 1.57
SCAMP4-213ENST00000621748 RGPD2P0DJD1 1756 aa24.87■■□□□ 1.57
SCAMP4-213ENST00000621748 FAM208AQ9UK61 1670 aaKnown RBP24.86■■□□□ 1.57
SCAMP4-213ENST00000621748 BCL11BQ9C0K0 894 aaPredicted RBP24.86■■□□□ 1.57
SCAMP4-213ENST00000621748 RTL1A6NKG5 1358 aa24.85■■□□□ 1.57
SCAMP4-213ENST00000621748 RREB1Q92766 1687 aa24.84■■□□□ 1.57
SCAMP4-213ENST00000621748 R3HDM1Q15032 1099 aaKnown RBP24.83■■□□□ 1.57
SCAMP4-213ENST00000621748 HSP90AB2PQ58FF8 381 aa24.82■■□□□ 1.56
SCAMP4-213ENST00000621748 CGNL1Q0VF96 1302 aa24.82■■□□□ 1.56
SCAMP4-213ENST00000621748 NUP188Q5SRE5 1749 aa24.81■■□□□ 1.56
SCAMP4-213ENST00000621748 PLSCR1O15162 318 aa24.81■■□□□ 1.56
SCAMP4-213ENST00000621748 KAT6BQ8WYB5 2073 aa24.81■■□□□ 1.56
SCAMP4-213ENST00000621748 NBPF6Q5VWK0 638 aa24.8■■□□□ 1.56
SCAMP4-213ENST00000621748 NBPF4Q96M43 638 aa24.8■■□□□ 1.56
SCAMP4-213ENST00000621748 KCNQ2O43526 872 aa24.79■■□□□ 1.56
SCAMP4-213ENST00000621748 PANK3Q9H999 370 aa24.79■■□□□ 1.56
SCAMP4-213ENST00000621748 EMILIN1Q9Y6C2 1016 aa24.79■■□□□ 1.56
SCAMP4-213ENST00000621748 INSRP06213 1382 aa24.79■■□□□ 1.56
SCAMP4-213ENST00000621748 FLT4P35916 1363 aa24.78■■□□□ 1.56
SCAMP4-213ENST00000621748 ACSBG1Q96GR2 724 aa24.77■■□□□ 1.56
SCAMP4-213ENST00000621748 KIF24Q5T7B8 1368 aa24.77■■□□□ 1.56
SCAMP4-213ENST00000621748 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
SCAMP4-213ENST00000621748 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
SCAMP4-213ENST00000621748 MAP2P11137 1827 aaKnown RBP24.77■■□□□ 1.56
SCAMP4-213ENST00000621748 PROM2Q8N271 834 aa24.76■■□□□ 1.55
SCAMP4-213ENST00000621748 USHBP1Q8N6Y0 703 aa24.76■■□□□ 1.55
SCAMP4-213ENST00000621748 DDX54Q8TDD1 881 aaKnown RBP24.76■■□□□ 1.55
SCAMP4-213ENST00000621748 NBPF14Q5TI25 921 aa24.74■■□□□ 1.55
SCAMP4-213ENST00000621748 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-213ENST00000621748 MEGF6O75095 1541 aa24.74■■□□□ 1.55
SCAMP4-213ENST00000621748 NHSQ6T4R5 1651 aa24.74■■□□□ 1.55
SCAMP4-213ENST00000621748 PPM1GO15355 546 aaPredicted RBP24.73■■□□□ 1.55
SCAMP4-213ENST00000621748 ANKRD26Q9UPS8 1709 aa24.72■■□□□ 1.55
SCAMP4-213ENST00000621748 POLKQ9UBT6 870 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms