RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ILDR2Q71H61 639 aa19.67■□□□□ 0.74
CBWD3-217ENST00000621474 TRPC5Q9UL62 973 aaPredicted RBP19.67■□□□□ 0.74
CBWD3-217ENST00000621474 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
CBWD3-217ENST00000621474 ZBTB7CA1YPR0 619 aa19.66■□□□□ 0.74
CBWD3-217ENST00000621474 MAP3K19Q56UN5 1328 aa19.66■□□□□ 0.74
CBWD3-217ENST00000621474 VPS72Q15906 364 aa19.65■□□□□ 0.74
CBWD3-217ENST00000621474 RRS1Q15050 365 aaKnown RBP19.65■□□□□ 0.74
CBWD3-217ENST00000621474 GJD4Q96KN9 370 aaPredicted RBP19.63■□□□□ 0.73
CBWD3-217ENST00000621474 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
CBWD3-217ENST00000621474 RXRBP28702 533 aa19.62■□□□□ 0.73
CBWD3-217ENST00000621474 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
CBWD3-217ENST00000621474 LARP1Q6PKG0 1096 aaKnown RBP19.62■□□□□ 0.73
CBWD3-217ENST00000621474 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
CBWD3-217ENST00000621474 RGS12O14924 1447 aa19.61■□□□□ 0.73
CBWD3-217ENST00000621474 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
CBWD3-217ENST00000621474 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
CBWD3-217ENST00000621474 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
CBWD3-217ENST00000621474 BLMP54132 1417 aaPredicted RBP19.6■□□□□ 0.73
CBWD3-217ENST00000621474 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
CBWD3-217ENST00000621474 RTL1A6NKG5 1358 aa19.59■□□□□ 0.73
CBWD3-217ENST00000621474 ERBB3P21860 1342 aa19.59■□□□□ 0.73
CBWD3-217ENST00000621474 HOXC9P31274 260 aa19.59■□□□□ 0.73
CBWD3-217ENST00000621474 IP6K1Q92551 441 aa19.59■□□□□ 0.73
CBWD3-217ENST00000621474 RGPD2P0DJD1 1756 aa19.59■□□□□ 0.73
CBWD3-217ENST00000621474 SPATA31A1Q5TZJ5 1347 aa19.58■□□□□ 0.73
CBWD3-217ENST00000621474 TNNT2P45379 298 aaPredicted RBP19.58■□□□□ 0.73
CBWD3-217ENST00000621474 CRB1P82279 1406 aa19.58■□□□□ 0.72
CBWD3-217ENST00000621474 SMG6Q86US8 1419 aaKnown RBP19.58■□□□□ 0.72
CBWD3-217ENST00000621474 WDR17Q8IZU2 1322 aa19.58■□□□□ 0.72
CBWD3-217ENST00000621474 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
CBWD3-217ENST00000621474 POLKQ9UBT6 870 aa19.58■□□□□ 0.72
CBWD3-217ENST00000621474 WNK3Q9BYP7 1800 aa19.57■□□□□ 0.72
CBWD3-217ENST00000621474 THSD7AQ9UPZ6 1657 aa19.57■□□□□ 0.72
CBWD3-217ENST00000621474 KIF24Q5T7B8 1368 aa19.57■□□□□ 0.72
CBWD3-217ENST00000621474 EVA1CP58658 441 aa19.57■□□□□ 0.72
CBWD3-217ENST00000621474 FAM208AQ9UK61 1670 aaKnown RBP19.57■□□□□ 0.72
CBWD3-217ENST00000621474 BRWD3Q6RI45 1802 aa19.56■□□□□ 0.72
CBWD3-217ENST00000621474 EP400Q96L91 3159 aa19.56■□□□□ 0.72
CBWD3-217ENST00000621474 DDX10Q13206 875 aaKnown RBP19.56■□□□□ 0.72
CBWD3-217ENST00000621474 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
CBWD3-217ENST00000621474 CCDC9Q9Y3X0 531 aaKnown RBP19.56■□□□□ 0.72
CBWD3-217ENST00000621474 FLT4P35916 1363 aa19.56■□□□□ 0.72
CBWD3-217ENST00000621474 ONECUT3O60422 494 aaPredicted RBP19.55■□□□□ 0.72
CBWD3-217ENST00000621474 AMPHP49418 695 aa19.55■□□□□ 0.72
CBWD3-217ENST00000621474 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
CBWD3-217ENST00000621474 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
CBWD3-217ENST00000621474 ANKRD24Q8TF21 1146 aa19.54■□□□□ 0.72
CBWD3-217ENST00000621474 INSRP06213 1382 aa19.54■□□□□ 0.72
CBWD3-217ENST00000621474 USP35Q9P2H5 1018 aa19.54■□□□□ 0.72
CBWD3-217ENST00000621474 FAM98CQ17RN3 349 aaKnown RBP19.52■□□□□ 0.72
CBWD3-217ENST00000621474 TOM1L2Q6ZVM7 507 aa19.52■□□□□ 0.72
CBWD3-217ENST00000621474 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
CBWD3-217ENST00000621474 TCP11L2Q8N4U5 519 aa19.51■□□□□ 0.71
CBWD3-217ENST00000621474 PARP4Q9UKK3 1724 aaKnown RBP19.5■□□□□ 0.71
CBWD3-217ENST00000621474 PPM1GO15355 546 aaPredicted RBP19.5■□□□□ 0.71
CBWD3-217ENST00000621474 CSB-PGBD3P0DP91 1061 aa19.5■□□□□ 0.71
CBWD3-217ENST00000621474 BARGINQ6ZT62 677 aa19.5■□□□□ 0.71
CBWD3-217ENST00000621474 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
CBWD3-217ENST00000621474 CARD10Q9BWT7 1032 aa19.5■□□□□ 0.71
CBWD3-217ENST00000621474 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
CBWD3-217ENST00000621474 DISP2A7MBM2 1401 aa19.49■□□□□ 0.71
CBWD3-217ENST00000621474 LRRC37A3O60309 1634 aa19.48■□□□□ 0.71
CBWD3-217ENST00000621474 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
CBWD3-217ENST00000621474 PARD3Q8TEW0 1356 aa19.47■□□□□ 0.71
CBWD3-217ENST00000621474 NLRP2Q9NX02 1062 aa19.46■□□□□ 0.71
CBWD3-217ENST00000621474 NCAPD2Q15021 1401 aa19.45■□□□□ 0.7
CBWD3-217ENST00000621474 MTHFSP49914 203 aa19.45■□□□□ 0.7
CBWD3-217ENST00000621474 NBPF6Q5VWK0 638 aa19.45■□□□□ 0.7
CBWD3-217ENST00000621474 NBPF4Q96M43 638 aa19.45■□□□□ 0.7
CBWD3-217ENST00000621474 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
CBWD3-217ENST00000621474 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-217ENST00000621474 EIF4A2Q14240 407 aaKnown RBP19.43■□□□□ 0.7
CBWD3-217ENST00000621474 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
CBWD3-217ENST00000621474 USHBP1Q8N6Y0 703 aa19.41■□□□□ 0.7
CBWD3-217ENST00000621474 MEGF6O75095 1541 aa19.41■□□□□ 0.7
CBWD3-217ENST00000621474 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
CBWD3-217ENST00000621474 A0A0G2JS52 829 aa19.4■□□□□ 0.7
CBWD3-217ENST00000621474 MYT1Q01538 1121 aa19.4■□□□□ 0.7
CBWD3-217ENST00000621474 EYA1Q99502 592 aa19.4■□□□□ 0.7
CBWD3-217ENST00000621474 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
CBWD3-217ENST00000621474 IL2RBP14784 551 aa19.38■□□□□ 0.69
CBWD3-217ENST00000621474 IL13P35225 146 aa19.38■□□□□ 0.69
CBWD3-217ENST00000621474 TNS2Q63HR2 1409 aa19.38■□□□□ 0.69
CBWD3-217ENST00000621474 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
CBWD3-217ENST00000621474 CDCA7Q9BWT1 371 aaPredicted RBP19.37■□□□□ 0.69
CBWD3-217ENST00000621474 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
CBWD3-217ENST00000621474 OVOS2A0A0G2JMS6 1433 aa19.35■□□□□ 0.69
CBWD3-217ENST00000621474 PKD1L3Q7Z443 1732 aa19.35■□□□□ 0.69
CBWD3-217ENST00000621474 DDB1Q16531 1140 aa19.35■□□□□ 0.69
CBWD3-217ENST00000621474 RALBP1Q15311 655 aa19.34■□□□□ 0.69
CBWD3-217ENST00000621474 SBF2Q86WG5 1849 aa19.33■□□□□ 0.69
CBWD3-217ENST00000621474 SOCS7O14512 581 aa19.33■□□□□ 0.69
CBWD3-217ENST00000621474 PRKRIP1Q9H875 184 aaPredicted RBP19.33■□□□□ 0.69
CBWD3-217ENST00000621474 MARCH10Q8NA82 808 aaPredicted RBP19.33■□□□□ 0.68
CBWD3-217ENST00000621474 KDRP35968 1356 aa19.32■□□□□ 0.68
CBWD3-217ENST00000621474 EXOC5O00471 708 aa19.31■□□□□ 0.68
CBWD3-217ENST00000621474 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
CBWD3-217ENST00000621474 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
CBWD3-217ENST00000621474 AEBP1Q8IUX7 1158 aa19.31■□□□□ 0.68
CBWD3-217ENST00000621474 RAPGEF4Q8WZA2 1011 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms