RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
SNHG28-203ENST00000621242 SLIT3O75094 1523 aa22.62■■□□□ 1.21
SNHG28-203ENST00000621242 UTRNP46939 3433 aa22.61■■□□□ 1.21
SNHG28-203ENST00000621242 RGPD5Q99666 1765 aa22.61■■□□□ 1.21
SNHG28-203ENST00000621242 CENPJQ9HC77 1338 aaPredicted RBP22.6■■□□□ 1.21
SNHG28-203ENST00000621242 USP6P35125 1406 aa22.6■■□□□ 1.21
SNHG28-203ENST00000621242 PROM2Q8N271 834 aa22.6■■□□□ 1.21
SNHG28-203ENST00000621242 CABP1Q9NZU7 370 aa22.6■■□□□ 1.21
SNHG28-203ENST00000621242 QRICH2Q9H0J4 1663 aa22.6■■□□□ 1.21
SNHG28-203ENST00000621242 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
SNHG28-203ENST00000621242 AXIN2Q9Y2T1 843 aa22.59■■□□□ 1.21
SNHG28-203ENST00000621242 PIK3C2AO00443 1686 aa22.58■■□□□ 1.2
SNHG28-203ENST00000621242 ZBTB7AO95365 584 aa22.57■■□□□ 1.2
SNHG28-203ENST00000621242 MYOM1P52179 1685 aa22.57■■□□□ 1.2
SNHG28-203ENST00000621242 WDR17Q8IZU2 1322 aa22.57■■□□□ 1.2
SNHG28-203ENST00000621242 PTGER2P43116 358 aa22.54■■□□□ 1.2
SNHG28-203ENST00000621242 CDCA7Q9BWT1 371 aaPredicted RBP22.54■■□□□ 1.2
SNHG28-203ENST00000621242 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
SNHG28-203ENST00000621242 BCL9O00512 1426 aa22.53■■□□□ 1.2
SNHG28-203ENST00000621242 CPSF1Q10570 1443 aaKnown RBP22.52■■□□□ 1.2
SNHG28-203ENST00000621242 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
SNHG28-203ENST00000621242 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
SNHG28-203ENST00000621242 STK32BQ9NY57 414 aa22.51■■□□□ 1.19
SNHG28-203ENST00000621242 CSB-PGBD3P0DP91 1061 aa22.5■■□□□ 1.19
SNHG28-203ENST00000621242 CHD4Q14839 1912 aa22.49■■□□□ 1.19
SNHG28-203ENST00000621242 SOX12O15370 315 aa22.49■■□□□ 1.19
SNHG28-203ENST00000621242 SLC15A2Q16348 729 aa22.49■■□□□ 1.19
SNHG28-203ENST00000621242 CARD10Q9BWT7 1032 aa22.49■■□□□ 1.19
SNHG28-203ENST00000621242 EXOC5O00471 708 aa22.48■■□□□ 1.19
SNHG28-203ENST00000621242 KCNH5Q8NCM2 988 aa22.48■■□□□ 1.19
SNHG28-203ENST00000621242 KAT6BQ8WYB5 2073 aa22.47■■□□□ 1.19
SNHG28-203ENST00000621242 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
SNHG28-203ENST00000621242 SYT17Q9BSW7 474 aa22.47■■□□□ 1.19
SNHG28-203ENST00000621242 FHDC1Q9C0D6 1143 aaPredicted RBP22.47■■□□□ 1.19
SNHG28-203ENST00000621242 TTC21BQ7Z4L5 1316 aa22.47■■□□□ 1.19
SNHG28-203ENST00000621242 EVC2Q86UK5 1308 aa22.45■■□□□ 1.18
SNHG28-203ENST00000621242 TRPM1Q7Z4N2 1603 aa22.45■■□□□ 1.18
SNHG28-203ENST00000621242 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
SNHG28-203ENST00000621242 MTFR1LQ9H019 292 aa22.44■■□□□ 1.18
SNHG28-203ENST00000621242 NHSQ6T4R5 1651 aa22.43■■□□□ 1.18
SNHG28-203ENST00000621242 CCDC7Q96M83 1385 aa22.42■■□□□ 1.18
SNHG28-203ENST00000621242 SGIP1Q9BQI5 828 aa22.42■■□□□ 1.18
SNHG28-203ENST00000621242 NFAT5O94916 1531 aa22.41■■□□□ 1.18
SNHG28-203ENST00000621242 TNS2Q63HR2 1409 aa22.41■■□□□ 1.18
SNHG28-203ENST00000621242 ACSBG1Q96GR2 724 aa22.41■■□□□ 1.18
SNHG28-203ENST00000621242 TTC21AQ8NDW8 1320 aa22.4■■□□□ 1.18
SNHG28-203ENST00000621242 BTAF1O14981 1849 aa22.38■■□□□ 1.17
SNHG28-203ENST00000621242 ARXQ96QS3 562 aa22.37■■□□□ 1.17
SNHG28-203ENST00000621242 PAPPAQ13219 1627 aa22.37■■□□□ 1.17
SNHG28-203ENST00000621242 KTN1Q86UP2 1357 aaKnown RBP22.37■■□□□ 1.17
SNHG28-203ENST00000621242 ABCC6O95255 1503 aa22.36■■□□□ 1.17
SNHG28-203ENST00000621242 L3MBTL2Q969R5 705 aa22.36■■□□□ 1.17
SNHG28-203ENST00000621242 LTN1O94822 1766 aa22.35■■□□□ 1.17
SNHG28-203ENST00000621242 MON2Q7Z3U7 1717 aa22.35■■□□□ 1.17
SNHG28-203ENST00000621242 NLRP2Q9NX02 1062 aa22.34■■□□□ 1.17
SNHG28-203ENST00000621242 SENP3-EIF4A1A0A087X0R7 540 aa22.32■■□□□ 1.16
SNHG28-203ENST00000621242 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
SNHG28-203ENST00000621242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.32■■□□□ 1.16
SNHG28-203ENST00000621242 ERBB3P21860 1342 aa22.31■■□□□ 1.16
SNHG28-203ENST00000621242 MAP3K5Q99683 1374 aa22.31■■□□□ 1.16
SNHG28-203ENST00000621242 IL2RBP14784 551 aa22.31■■□□□ 1.16
SNHG28-203ENST00000621242 GOLGB1Q14789 3259 aaKnown RBP22.3■■□□□ 1.16
SNHG28-203ENST00000621242 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
SNHG28-203ENST00000621242 C1QTNF8P60827 252 aa22.3■■□□□ 1.16
SNHG28-203ENST00000621242 LRRC4BQ9NT99 713 aa22.3■■□□□ 1.16
SNHG28-203ENST00000621242 ROCK2O75116 1388 aaKnown RBP22.29■■□□□ 1.16
SNHG28-203ENST00000621242 USP31Q70CQ4 1352 aa22.29■■□□□ 1.16
SNHG28-203ENST00000621242 NME9Q86XW9 330 aa22.28■■□□□ 1.16
SNHG28-203ENST00000621242 GPR162Q16538 588 aa22.27■■□□□ 1.16
SNHG28-203ENST00000621242 QSER1Q2KHR3 1735 aa22.27■■□□□ 1.16
SNHG28-203ENST00000621242 ANKRD24Q8TF21 1146 aa22.27■■□□□ 1.16
SNHG28-203ENST00000621242 KLHL34Q8N239 644 aa22.25■■□□□ 1.15
SNHG28-203ENST00000621242 AKT1S1Q96B36 256 aa22.25■■□□□ 1.15
SNHG28-203ENST00000621242 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
SNHG28-203ENST00000621242 TUBGCP6Q96RT7 1819 aa22.24■■□□□ 1.15
SNHG28-203ENST00000621242 COL24A1Q17RW2 1714 aa22.24■■□□□ 1.15
SNHG28-203ENST00000621242 CD163L1Q9NR16 1453 aa22.23■■□□□ 1.15
SNHG28-203ENST00000621242 SLC16A10Q8TF71 515 aa22.23■■□□□ 1.15
SNHG28-203ENST00000621242 SBNO2Q9Y2G9 1366 aa22.23■■□□□ 1.15
SNHG28-203ENST00000621242 POLD1P28340 1107 aa22.21■■□□□ 1.15
SNHG28-203ENST00000621242 DDX54Q8TDD1 881 aaKnown RBP22.21■■□□□ 1.15
SNHG28-203ENST00000621242 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
SNHG28-203ENST00000621242 SLC27A3Q5K4L6 730 aa22.2■■□□□ 1.14
SNHG28-203ENST00000621242 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.14
SNHG28-203ENST00000621242 PNPLA7Q6ZV29 1317 aa22.2■■□□□ 1.14
SNHG28-203ENST00000621242 KCNQ4P56696 695 aa22.19■■□□□ 1.14
SNHG28-203ENST00000621242 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
SNHG28-203ENST00000621242 HDGFL2Q7Z4V5 671 aaPredicted RBP22.18■■□□□ 1.14
SNHG28-203ENST00000621242 SLC12A5Q9H2X9 1139 aa22.18■■□□□ 1.14
SNHG28-203ENST00000621242 TFCP2L1Q9NZI6 479 aa22.18■■□□□ 1.14
SNHG28-203ENST00000621242 GIGYF1O75420 1035 aaPredicted RBP22.17■■□□□ 1.14
SNHG28-203ENST00000621242 LY75O60449 1722 aa22.17■■□□□ 1.14
SNHG28-203ENST00000621242 DOT1LQ8TEK3 1739 aa22.17■■□□□ 1.14
SNHG28-203ENST00000621242 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
SNHG28-203ENST00000621242 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
SNHG28-203ENST00000621242 SYTL4Q96C24 671 aaPredicted RBP22.16■■□□□ 1.14
SNHG28-203ENST00000621242 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
SNHG28-203ENST00000621242 CEP350Q5VT06 3117 aa22.15■■□□□ 1.14
SNHG28-203ENST00000621242 EDC4Q6P2E9 1401 aaKnown RBP22.15■■□□□ 1.14
SNHG28-203ENST00000621242 IP6K1Q92551 441 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms