RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 AFF2P51816 1311 aa14.86□□□□□ -0.03
POLR2J3-221ENST00000621093 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
POLR2J3-221ENST00000621093 BTG4Q9NY30 223 aa14.85□□□□□ -0.03
POLR2J3-221ENST00000621093 BCL9LQ86UU0 1499 aa14.84□□□□□ -0.03
POLR2J3-221ENST00000621093 ABCC6O95255 1503 aa14.84□□□□□ -0.03
POLR2J3-221ENST00000621093 PPP2R1AP30153 589 aa14.84□□□□□ -0.03
POLR2J3-221ENST00000621093 HOXC9P31274 260 aa14.84□□□□□ -0.03
POLR2J3-221ENST00000621093 AMPHP49418 695 aa14.84□□□□□ -0.03
POLR2J3-221ENST00000621093 SMG6Q86US8 1419 aaKnown RBP14.83□□□□□ -0.03
POLR2J3-221ENST00000621093 COL5A2P05997 1499 aaPredicted RBP14.83□□□□□ -0.03
POLR2J3-221ENST00000621093 FNBP4Q8N3X1 1017 aaPredicted RBP14.83□□□□□ -0.04
POLR2J3-221ENST00000621093 IP6K1Q92551 441 aa14.83□□□□□ -0.04
POLR2J3-221ENST00000621093 PRKRIP1Q9H875 184 aaPredicted RBP14.83□□□□□ -0.04
POLR2J3-221ENST00000621093 MTHFSP49914 203 aa14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 HSP90AB2PQ58FF8 381 aa14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 LTV1Q96GA3 475 aaPredicted RBP14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 STRN4Q9NRL3 753 aa14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 RGS17Q9UGC6 210 aaPredicted RBP14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 USP21Q9UK80 565 aa14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 FLT4P35916 1363 aa14.82□□□□□ -0.04
POLR2J3-221ENST00000621093 CDK12Q9NYV4 1490 aaPredicted RBP14.81□□□□□ -0.04
POLR2J3-221ENST00000621093 FAM208AQ9UK61 1670 aaKnown RBP14.81□□□□□ -0.04
POLR2J3-221ENST00000621093 RALBP1Q15311 655 aa14.8□□□□□ -0.04
POLR2J3-221ENST00000621093 UNC5CLQ8IV45 518 aa14.8□□□□□ -0.04
POLR2J3-221ENST00000621093 BLMP54132 1417 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-221ENST00000621093 WNK3Q9BYP7 1800 aa14.8□□□□□ -0.04
POLR2J3-221ENST00000621093 COL3A1P02461 1466 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-221ENST00000621093 INSRP06213 1382 aa14.79□□□□□ -0.04
POLR2J3-221ENST00000621093 EVA1CP58658 441 aa14.79□□□□□ -0.04
POLR2J3-221ENST00000621093 KIF24Q5T7B8 1368 aa14.79□□□□□ -0.04
POLR2J3-221ENST00000621093 LARP1Q6PKG0 1096 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-221ENST00000621093 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
POLR2J3-221ENST00000621093 GLI3P10071 1580 aa14.78□□□□□ -0.04
POLR2J3-221ENST00000621093 ANP32CO43423 234 aa14.78□□□□□ -0.04
POLR2J3-221ENST00000621093 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-221ENST00000621093 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-221ENST00000621093 RGPD1P0DJD0 1748 aa14.78□□□□□ -0.04
POLR2J3-221ENST00000621093 ATRNO75882 1429 aa14.77□□□□□ -0.04
POLR2J3-221ENST00000621093 ERBB3P21860 1342 aa14.77□□□□□ -0.04
POLR2J3-221ENST00000621093 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
POLR2J3-221ENST00000621093 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
POLR2J3-221ENST00000621093 WDR17Q8IZU2 1322 aa14.76□□□□□ -0.05
POLR2J3-221ENST00000621093 EIF4A2Q14240 407 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-221ENST00000621093 POTEAQ6S8J7 498 aa14.76□□□□□ -0.05
POLR2J3-221ENST00000621093 QTRT2Q9H974 415 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-221ENST00000621093 CCDC9Q9Y3X0 531 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-221ENST00000621093 VPS72Q15906 364 aa14.75□□□□□ -0.05
POLR2J3-221ENST00000621093 ZNF772Q68DY9 489 aaPredicted RBP14.75□□□□□ -0.05
POLR2J3-221ENST00000621093 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
POLR2J3-221ENST00000621093 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
POLR2J3-221ENST00000621093 CRB1P82279 1406 aa14.75□□□□□ -0.05
POLR2J3-221ENST00000621093 CCDC184Q52MB2 194 aa14.74□□□□□ -0.05
POLR2J3-221ENST00000621093 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
POLR2J3-221ENST00000621093 NLRP2Q9NX02 1062 aa14.74□□□□□ -0.05
POLR2J3-221ENST00000621093 TRPC5Q9UL62 973 aaPredicted RBP14.74□□□□□ -0.05
POLR2J3-221ENST00000621093 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
POLR2J3-221ENST00000621093 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
POLR2J3-221ENST00000621093 IL13P35225 146 aa14.73□□□□□ -0.05
POLR2J3-221ENST00000621093 NBPF6Q5VWK0 638 aa14.73□□□□□ -0.05
POLR2J3-221ENST00000621093 NBPF4Q96M43 638 aa14.73□□□□□ -0.05
POLR2J3-221ENST00000621093 BRWD3Q6RI45 1802 aa14.73□□□□□ -0.05
POLR2J3-221ENST00000621093 SPATA31A1Q5TZJ5 1347 aa14.72□□□□□ -0.05
POLR2J3-221ENST00000621093 GJD4Q96KN9 370 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-221ENST00000621093 EYA1Q99502 592 aa14.72□□□□□ -0.05
POLR2J3-221ENST00000621093 DIAPH1O60610 1272 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-221ENST00000621093 CFAP53Q96M91 514 aa14.71□□□□□ -0.05
POLR2J3-221ENST00000621093 CARD10Q9BWT7 1032 aa14.71□□□□□ -0.05
POLR2J3-221ENST00000621093 THSD7AQ9UPZ6 1657 aa14.7□□□□□ -0.06
POLR2J3-221ENST00000621093 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
POLR2J3-221ENST00000621093 PARP4Q9UKK3 1724 aaKnown RBP14.69□□□□□ -0.06
POLR2J3-221ENST00000621093 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
POLR2J3-221ENST00000621093 IGSF1Q8N6C5 1336 aa14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 NCAPD2Q15021 1401 aa14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 LRRC37A3O60309 1634 aa14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 U2SURPO15042 1029 aaKnown RBP14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 AEBP1Q8IUX7 1158 aa14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 MIER1Q8N108 512 aa14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 TCP11L2Q8N4U5 519 aa14.68□□□□□ -0.06
POLR2J3-221ENST00000621093 MEGF6O75095 1541 aa14.67□□□□□ -0.06
POLR2J3-221ENST00000621093 HMOX1P09601 288 aa14.67□□□□□ -0.06
POLR2J3-221ENST00000621093 RXRBP28702 533 aa14.67□□□□□ -0.06
POLR2J3-221ENST00000621093 RBM6P78332 1123 aaKnown RBP14.67□□□□□ -0.06
POLR2J3-221ENST00000621093 DISP2A7MBM2 1401 aa14.66□□□□□ -0.06
POLR2J3-221ENST00000621093 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
POLR2J3-221ENST00000621093 BARGINQ6ZT62 677 aa14.65□□□□□ -0.06
POLR2J3-221ENST00000621093 PKD1L3Q7Z443 1732 aa14.65□□□□□ -0.06
POLR2J3-221ENST00000621093 RGS12O14924 1447 aa14.65□□□□□ -0.06
POLR2J3-221ENST00000621093 VIRMAQ69YN4 1812 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-221ENST00000621093 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
POLR2J3-221ENST00000621093 THRAP3Q9Y2W1 955 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-221ENST00000621093 A0A0G2JS52 829 aa14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 ONECUT3O60422 494 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 IL2RBP14784 551 aa14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 MYT1Q01538 1121 aa14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 SEPT12Q8IYM1 358 aa14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 NUDCQ9Y266 331 aa14.63□□□□□ -0.07
POLR2J3-221ENST00000621093 KDRP35968 1356 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms