RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 CCDC85AQ96PX6 553 aaPredicted RBP6.3□□□□□ -1.4
LRRC39-204ENST00000620882 EVA1BQ9NVM1 165 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 HPS5Q9UPZ3 1129 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 PCDHB3Q9Y5E6 796 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 RBM47A0AV96 593 aaKnown RBP6.29□□□□□ -1.4
LRRC39-204ENST00000620882 TLL1O43897 1013 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 FMNL1O95466 1100 aaPredicted RBP6.29□□□□□ -1.4
LRRC39-204ENST00000620882 CCNYL3P0C7X3 344 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 PBX2P40425 430 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 PTCRAQ6ISU1 281 aaPredicted RBP6.29□□□□□ -1.4
LRRC39-204ENST00000620882 FAM200AQ8TCP9 573 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 NUDT12Q9BQG2 462 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 IGSF5Q9NSI5 407 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 PRMT3O60678 531 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 DXOO77932 396 aaKnown RBP6.29□□□□□ -1.4
LRRC39-204ENST00000620882 B4GALNT3Q6L9W6 998 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 GAS2L2Q8NHY3 880 aa6.29□□□□□ -1.4
LRRC39-204ENST00000620882 ZC3H4Q9UPT8 1303 aaKnown RBP6.29□□□□□ -1.4
LRRC39-204ENST00000620882 SOWAHBA6NEL2 793 aa6.28□□□□□ -1.4
LRRC39-204ENST00000620882 ATP5J2-PTCD1G3V325 749 aa6.28□□□□□ -1.4
LRRC39-204ENST00000620882 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
LRRC39-204ENST00000620882 LARP1Q6PKG0 1096 aaKnown RBP6.28□□□□□ -1.4
LRRC39-204ENST00000620882 CAPN12Q6ZSI9 719 aa6.28□□□□□ -1.4
LRRC39-204ENST00000620882 ZBTB7BO15156 539 aaPredicted RBP6.27□□□□□ -1.4
LRRC39-204ENST00000620882 PPP4CP60510 307 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 COPS2P61201 443 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 TAGLNQ01995 201 aaKnown RBP6.27□□□□□ -1.4
LRRC39-204ENST00000620882 OCLNQ16625 522 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 PDXDC2PQ6P474 469 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 CDCA7Q9BWT1 371 aaPredicted RBP6.27□□□□□ -1.4
LRRC39-204ENST00000620882 CARD14Q9BXL6 1004 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 ANO2Q9NQ90 1003 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 WBP1LQ9NX94 342 aa6.27□□□□□ -1.4
LRRC39-204ENST00000620882 ZNF211Q13398 564 aaPredicted RBP6.27□□□□□ -1.41
LRRC39-204ENST00000620882 SH3BP5LQ7L8J4 393 aa6.27□□□□□ -1.41
LRRC39-204ENST00000620882 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
LRRC39-204ENST00000620882 TK2O00142 265 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 ZNF16P17020 682 aaPredicted RBP6.26□□□□□ -1.41
LRRC39-204ENST00000620882 MMP16P51512 607 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 LSM11P83369 360 aaKnown RBP eCLIP6.26□□□□□ -1.41
LRRC39-204ENST00000620882 PTK2Q05397 1052 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 MRRFQ96E11 262 aaKnown RBP6.26□□□□□ -1.41
LRRC39-204ENST00000620882 SPSB2Q99619 263 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 MYT1LQ9UL68 1186 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 MTMR3Q13615 1198 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 EML3Q32P44 896 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 MSS51Q4VC12 460 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 OXLD1Q5BKU9 147 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 C4orf48Q5BLP8 95 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 HS3ST6Q96QI5 342 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 PURBQ96QR8 312 aaKnown RBP6.26□□□□□ -1.41
LRRC39-204ENST00000620882 ARHGAP9Q9BRR9 750 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 UNC93B1Q9H1C4 597 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 DNAAF2Q9NVR5 837 aaKnown RBP6.26□□□□□ -1.41
LRRC39-204ENST00000620882 GPSM3Q9Y4H4 160 aa6.26□□□□□ -1.41
LRRC39-204ENST00000620882 MAGEB6P1A0A0J9YX57 407 aa6.25□□□□□ -1.41
LRRC39-204ENST00000620882 SFI1A8K8P3 1242 aa6.25□□□□□ -1.41
LRRC39-204ENST00000620882 GIGYF1O75420 1035 aaPredicted RBP6.25□□□□□ -1.41
LRRC39-204ENST00000620882 NR1I2O75469 434 aa6.25□□□□□ -1.41
LRRC39-204ENST00000620882 NPAS4Q8IUM7 802 aa6.25□□□□□ -1.41
LRRC39-204ENST00000620882 MARSP56192 900 aaKnown RBP6.24□□□□□ -1.41
LRRC39-204ENST00000620882 ECM1Q16610 540 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 SWI5Q1ZZU3 235 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 SH3RF1Q7Z6J0 888 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 ANKK1Q8NFD2 765 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 PRR14Q9BWN1 585 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 SEPT3Q9UH03 358 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 TSR3Q9UJK0 312 aaKnown RBP6.24□□□□□ -1.41
LRRC39-204ENST00000620882 GTF2IP78347 998 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 SIX5Q8N196 739 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 GIPC2Q8TF65 315 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
LRRC39-204ENST00000620882 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
LRRC39-204ENST00000620882 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 ANKRD33BA6NCL7 494 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 ABL1P00519 1130 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 NBPF14Q5TI25 921 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 TPCN2Q8NHX9 752 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 MKNK1Q9BUB5 465 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
LRRC39-204ENST00000620882 H3BRB1 525 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 MAP7D1Q3KQU3 841 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 CCDC102BQ68D86 513 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 ZBTB33Q86T24 672 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 CCDC24Q8N4L8 307 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 FOXJ1Q92949 421 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 BCL2L13Q9BXK5 485 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 TUT1Q9H6E5 874 aaKnown RBP6.22□□□□□ -1.41
LRRC39-204ENST00000620882 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 ERFEQ4G0M1 354 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 LARGE2Q8N3Y3 721 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 GPKOWQ92917 476 aaPredicted RBP eCLIP6.22□□□□□ -1.41
LRRC39-204ENST00000620882 WNT2BQ93097 391 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 CXXC1Q9P0U4 656 aaPredicted RBP6.22□□□□□ -1.41
LRRC39-204ENST00000620882 NOD1Q9Y239 953 aa6.22□□□□□ -1.41
LRRC39-204ENST00000620882 STAU1O95793 577 aaKnown RBP6.21□□□□□ -1.42
LRRC39-204ENST00000620882 TAS1R3Q7RTX0 852 aa6.21□□□□□ -1.42
LRRC39-204ENST00000620882 DZIP3Q86Y13 1208 aaKnown RBP6.2□□□□□ -1.42
LRRC39-204ENST00000620882 TSEN2Q8NCE0 465 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms