RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 TESK2Q96S53 571 aa16.1■□□□□ 0.17
LINC00649-218ENST00000620580 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
LINC00649-218ENST00000620580 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
LINC00649-218ENST00000620580 WDR17Q8IZU2 1322 aa16.09■□□□□ 0.17
LINC00649-218ENST00000620580 DISP2A7MBM2 1401 aa16.09■□□□□ 0.17
LINC00649-218ENST00000620580 MON2Q7Z3U7 1717 aa16.08■□□□□ 0.17
LINC00649-218ENST00000620580 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
LINC00649-218ENST00000620580 HDGFL2Q7Z4V5 671 aaPredicted RBP16.08■□□□□ 0.16
LINC00649-218ENST00000620580 NFAT5O94916 1531 aa16.08■□□□□ 0.16
LINC00649-218ENST00000620580 R3HDM1Q15032 1099 aaKnown RBP16.07■□□□□ 0.16
LINC00649-218ENST00000620580 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
LINC00649-218ENST00000620580 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
LINC00649-218ENST00000620580 DDB1Q16531 1140 aa16.06■□□□□ 0.16
LINC00649-218ENST00000620580 PARP4Q9UKK3 1724 aaKnown RBP16.05■□□□□ 0.16
LINC00649-218ENST00000620580 PTF1AQ7RTS3 328 aa16.05■□□□□ 0.16
LINC00649-218ENST00000620580 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
LINC00649-218ENST00000620580 MARCH10Q8NA82 808 aaPredicted RBP16.04■□□□□ 0.16
LINC00649-218ENST00000620580 PUS7Q96PZ0 661 aaKnown RBP16.04■□□□□ 0.16
LINC00649-218ENST00000620580 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
LINC00649-218ENST00000620580 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.16
LINC00649-218ENST00000620580 LRRC37A3O60309 1634 aa16.02■□□□□ 0.16
LINC00649-218ENST00000620580 FBLN1P23142 703 aa16.01■□□□□ 0.15
LINC00649-218ENST00000620580 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
LINC00649-218ENST00000620580 PEAK1Q9H792 1746 aa16.01■□□□□ 0.15
LINC00649-218ENST00000620580 OVOS2A0A0G2JMS6 1433 aa16.01■□□□□ 0.15
LINC00649-218ENST00000620580 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
LINC00649-218ENST00000620580 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
LINC00649-218ENST00000620580 NLRP2Q9NX02 1062 aa16■□□□□ 0.15
LINC00649-218ENST00000620580 USP47Q96K76 1375 aa16■□□□□ 0.15
LINC00649-218ENST00000620580 ERBB3P21860 1342 aa15.99■□□□□ 0.15
LINC00649-218ENST00000620580 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
LINC00649-218ENST00000620580 CDCA7Q9BWT1 371 aaPredicted RBP15.99■□□□□ 0.15
LINC00649-218ENST00000620580 PARD3Q8TEW0 1356 aa15.99■□□□□ 0.15
LINC00649-218ENST00000620580 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
LINC00649-218ENST00000620580 EXOC5O00471 708 aa15.98■□□□□ 0.15
LINC00649-218ENST00000620580 ANKRD24Q8TF21 1146 aa15.98■□□□□ 0.15
LINC00649-218ENST00000620580 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
LINC00649-218ENST00000620580 CCDC7Q96M83 1385 aa15.98■□□□□ 0.15
LINC00649-218ENST00000620580 LTN1O94822 1766 aa15.98■□□□□ 0.15
LINC00649-218ENST00000620580 ABCC6O95255 1503 aa15.96■□□□□ 0.15
LINC00649-218ENST00000620580 C11orf95C9JLR9 678 aaPredicted RBP15.96■□□□□ 0.15
LINC00649-218ENST00000620580 TMF1P82094 1093 aa15.96■□□□□ 0.15
LINC00649-218ENST00000620580 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
LINC00649-218ENST00000620580 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
LINC00649-218ENST00000620580 RREB1Q92766 1687 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 LRP5O75197 1615 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 NUP188Q5SRE5 1749 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 PROM2Q8N271 834 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 IP6K1Q92551 441 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 COG3Q96JB2 828 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 NINLQ9Y2I6 1382 aa15.95■□□□□ 0.14
LINC00649-218ENST00000620580 PLSCR1O15162 318 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 KCNQ2O43526 872 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 NBPF14Q5TI25 921 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 ANKRD36BQ8N2N9 1353 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
LINC00649-218ENST00000620580 FYB1O15117 783 aa15.93■□□□□ 0.14
LINC00649-218ENST00000620580 IL2RBP14784 551 aa15.93■□□□□ 0.14
LINC00649-218ENST00000620580 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
LINC00649-218ENST00000620580 BCL9O00512 1426 aa15.93■□□□□ 0.14
LINC00649-218ENST00000620580 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
LINC00649-218ENST00000620580 KAT6BQ8WYB5 2073 aa15.92■□□□□ 0.14
LINC00649-218ENST00000620580 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
LINC00649-218ENST00000620580 TNS2Q63HR2 1409 aa15.92■□□□□ 0.14
LINC00649-218ENST00000620580 HOXC9P31274 260 aa15.91■□□□□ 0.14
LINC00649-218ENST00000620580 RRS1Q15050 365 aaKnown RBP15.91■□□□□ 0.14
LINC00649-218ENST00000620580 AMPHP49418 695 aa15.9■□□□□ 0.14
LINC00649-218ENST00000620580 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
LINC00649-218ENST00000620580 TIMELESSQ9UNS1 1208 aa15.89■□□□□ 0.13
LINC00649-218ENST00000620580 TXNRD1Q16881 649 aa15.88■□□□□ 0.13
LINC00649-218ENST00000620580 PDGFDQ9GZP0 370 aaPredicted RBP15.88■□□□□ 0.13
LINC00649-218ENST00000620580 DDX54Q8TDD1 881 aaKnown RBP15.87■□□□□ 0.13
LINC00649-218ENST00000620580 CDCA8Q53HL2 280 aa15.86■□□□□ 0.13
LINC00649-218ENST00000620580 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
LINC00649-218ENST00000620580 NBPF6Q5VWK0 638 aa15.85■□□□□ 0.13
LINC00649-218ENST00000620580 USHBP1Q8N6Y0 703 aa15.85■□□□□ 0.13
LINC00649-218ENST00000620580 NBPF4Q96M43 638 aa15.85■□□□□ 0.13
LINC00649-218ENST00000620580 RGPD3A6NKT7 1758 aaPredicted RBP15.85■□□□□ 0.13
LINC00649-218ENST00000620580 RGPD4Q7Z3J3 1758 aa15.85■□□□□ 0.13
LINC00649-218ENST00000620580 HSP90AB2PQ58FF8 381 aa15.84■□□□□ 0.13
LINC00649-218ENST00000620580 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
LINC00649-218ENST00000620580 SPON1Q9HCB6 807 aa15.83■□□□□ 0.12
LINC00649-218ENST00000620580 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
LINC00649-218ENST00000620580 NHSQ6T4R5 1651 aa15.83■□□□□ 0.12
LINC00649-218ENST00000620580 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
LINC00649-218ENST00000620580 MYOM1P52179 1685 aa15.82■□□□□ 0.12
LINC00649-218ENST00000620580 FAM208AQ9UK61 1670 aaKnown RBP15.82■□□□□ 0.12
LINC00649-218ENST00000620580 RTL1A6NKG5 1358 aa15.81■□□□□ 0.12
LINC00649-218ENST00000620580 MEGF6O75095 1541 aa15.81■□□□□ 0.12
LINC00649-218ENST00000620580 ZBTB7AO95365 584 aa15.81■□□□□ 0.12
LINC00649-218ENST00000620580 SLC15A2Q16348 729 aa15.81■□□□□ 0.12
LINC00649-218ENST00000620580 STK32BQ9NY57 414 aa15.81■□□□□ 0.12
LINC00649-218ENST00000620580 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
LINC00649-218ENST00000620580 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
LINC00649-218ENST00000620580 LRRC4BQ9NT99 713 aa15.8■□□□□ 0.12
LINC00649-218ENST00000620580 BTAF1O14981 1849 aa15.8■□□□□ 0.12
LINC00649-218ENST00000620580 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
LINC00649-218ENST00000620580 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms