RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 SLC24A1O60721 1099 aa33.85■■■■□ 3.01
ATXN3-252ENST00000620536 TNS1Q9HBL0 1735 aaKnown RBP33.84■■■■□ 3.01
ATXN3-252ENST00000620536 APBA3O96018 575 aa33.84■■■■□ 3.01
ATXN3-252ENST00000620536 CSB-PGBD3P0DP91 1061 aa33.84■■■■□ 3.01
ATXN3-252ENST00000620536 NME9Q86XW9 330 aa33.83■■■■□ 3.01
ATXN3-252ENST00000620536 USP31Q70CQ4 1352 aa33.83■■■■□ 3.01
ATXN3-252ENST00000620536 SRCAPQ6ZRS2 3230 aa33.83■■■■□ 3.01
ATXN3-252ENST00000620536 PARP4Q9UKK3 1724 aaKnown RBP33.82■■■■□ 3
ATXN3-252ENST00000620536 EZH2Q15910 746 aaKnown RBP33.82■■■■□ 3
ATXN3-252ENST00000620536 NFAT5O94916 1531 aa33.82■■■■□ 3
ATXN3-252ENST00000620536 C11orf95C9JLR9 678 aaPredicted RBP33.81■■■■□ 3
ATXN3-252ENST00000620536 TESK2Q96S53 571 aa33.81■■■■□ 3
ATXN3-252ENST00000620536 EDC4Q6P2E9 1401 aaKnown RBP33.8■■■■□ 3
ATXN3-252ENST00000620536 PSDA5PKW4 1024 aaPredicted RBP33.8■■■■□ 3
ATXN3-252ENST00000620536 DDB1Q16531 1140 aa33.8■■■■□ 3
ATXN3-252ENST00000620536 A0A1W2PP64 1363 aa33.78■■■■□ 3
ATXN3-252ENST00000620536 CAMKK2Q96RR4 588 aa33.78■■■■□ 3
ATXN3-252ENST00000620536 CDCA7Q9BWT1 371 aaPredicted RBP33.78■■■■□ 3
ATXN3-252ENST00000620536 CARD10Q9BWT7 1032 aa33.76■■■□□ 2.99
ATXN3-252ENST00000620536 PARD3Q8TEW0 1356 aa33.75■■■□□ 2.99
ATXN3-252ENST00000620536 NINLQ9Y2I6 1382 aa33.75■■■□□ 2.99
ATXN3-252ENST00000620536 ABCC6O95255 1503 aa33.74■■■□□ 2.99
ATXN3-252ENST00000620536 OVOS2A0A0G2JMS6 1433 aa33.73■■■□□ 2.99
ATXN3-252ENST00000620536 OVOS2A0A0J9YW53 1432 aa33.73■■■□□ 2.99
ATXN3-252ENST00000620536 OVOS2Q6IE36 1432 aa33.73■■■□□ 2.99
ATXN3-252ENST00000620536 USP54Q70EL1 1684 aa33.73■■■□□ 2.99
ATXN3-252ENST00000620536 RGPD5Q99666 1765 aa33.72■■■□□ 2.99
ATXN3-252ENST00000620536 LRRC37A3O60309 1634 aa33.71■■■□□ 2.99
ATXN3-252ENST00000620536 R3HDM1Q15032 1099 aaKnown RBP33.71■■■□□ 2.99
ATXN3-252ENST00000620536 USP47Q96K76 1375 aa33.69■■■□□ 2.98
ATXN3-252ENST00000620536 CCDC7Q96M83 1385 aa33.69■■■□□ 2.98
ATXN3-252ENST00000620536 TMF1P82094 1093 aa33.68■■■□□ 2.98
ATXN3-252ENST00000620536 PCGF6Q9BYE7 350 aa33.66■■■□□ 2.98
ATXN3-252ENST00000620536 WNK3Q9BYP7 1800 aa33.66■■■□□ 2.98
ATXN3-252ENST00000620536 EXOC5O00471 708 aa33.65■■■□□ 2.98
ATXN3-252ENST00000620536 TIMELESSQ9UNS1 1208 aa33.65■■■□□ 2.98
ATXN3-252ENST00000620536 PEAK1Q9H792 1746 aa33.65■■■□□ 2.98
ATXN3-252ENST00000620536 ERBB3P21860 1342 aa33.64■■■□□ 2.98
ATXN3-252ENST00000620536 MARCH10Q8NA82 808 aaPredicted RBP33.64■■■□□ 2.98
ATXN3-252ENST00000620536 NLRP2Q9NX02 1062 aa33.64■■■□□ 2.98
ATXN3-252ENST00000620536 NBPF14Q5TI25 921 aa33.62■■■□□ 2.97
ATXN3-252ENST00000620536 COG3Q96JB2 828 aa33.62■■■□□ 2.97
ATXN3-252ENST00000620536 LTN1O94822 1766 aa33.62■■■□□ 2.97
ATXN3-252ENST00000620536 LRP5O75197 1615 aa33.61■■■□□ 2.97
ATXN3-252ENST00000620536 ANKRD24Q8TF21 1146 aa33.61■■■□□ 2.97
ATXN3-252ENST00000620536 CLSPNQ9HAW4 1339 aa33.6■■■□□ 2.97
ATXN3-252ENST00000620536 ANKRD36BQ8N2N9 1353 aa33.6■■■□□ 2.97
ATXN3-252ENST00000620536 CDCA8Q53HL2 280 aa33.59■■■□□ 2.97
ATXN3-252ENST00000620536 BCL11BQ9C0K0 894 aaPredicted RBP33.59■■■□□ 2.97
ATXN3-252ENST00000620536 RREB1Q92766 1687 aa33.58■■■□□ 2.97
ATXN3-252ENST00000620536 BCL9O00512 1426 aa33.56■■■□□ 2.96
ATXN3-252ENST00000620536 PLSCR1O15162 318 aa33.55■■■□□ 2.96
ATXN3-252ENST00000620536 IP6K1Q92551 441 aa33.55■■■□□ 2.96
ATXN3-252ENST00000620536 IL2RBP14784 551 aa33.54■■■□□ 2.96
ATXN3-252ENST00000620536 SBF2Q86WG5 1849 aa33.53■■■□□ 2.96
ATXN3-252ENST00000620536 NUP188Q5SRE5 1749 aa33.53■■■□□ 2.96
ATXN3-252ENST00000620536 TNS2Q63HR2 1409 aa33.53■■■□□ 2.96
ATXN3-252ENST00000620536 PTF1AQ7RTS3 328 aa33.51■■■□□ 2.95
ATXN3-252ENST00000620536 LTV1Q96GA3 475 aaPredicted RBP33.5■■■□□ 2.95
ATXN3-252ENST00000620536 AMPHP49418 695 aa33.49■■■□□ 2.95
ATXN3-252ENST00000620536 MAP3K19Q56UN5 1328 aa33.48■■■□□ 2.95
ATXN3-252ENST00000620536 FYB1O15117 783 aa33.46■■■□□ 2.95
ATXN3-252ENST00000620536 RGPD3A6NKT7 1758 aaPredicted RBP33.46■■■□□ 2.95
ATXN3-252ENST00000620536 RGPD4Q7Z3J3 1758 aa33.46■■■□□ 2.95
ATXN3-252ENST00000620536 FBLN1P23142 703 aa33.45■■■□□ 2.95
ATXN3-252ENST00000620536 HOXC9P31274 260 aa33.45■■■□□ 2.95
ATXN3-252ENST00000620536 GGNBP2Q9H3C7 697 aa33.45■■■□□ 2.95
ATXN3-252ENST00000620536 KCNQ2O43526 872 aa33.4■■■□□ 2.94
ATXN3-252ENST00000620536 ACSBG1Q96GR2 724 aa33.4■■■□□ 2.94
ATXN3-252ENST00000620536 FAM208AQ9UK61 1670 aaKnown RBP33.39■■■□□ 2.94
ATXN3-252ENST00000620536 RRS1Q15050 365 aaKnown RBP33.38■■■□□ 2.93
ATXN3-252ENST00000620536 PROM2Q8N271 834 aa33.38■■■□□ 2.93
ATXN3-252ENST00000620536 RTL1A6NKG5 1358 aa33.37■■■□□ 2.93
ATXN3-252ENST00000620536 TXNRD1Q16881 649 aa33.36■■■□□ 2.93
ATXN3-252ENST00000620536 CCER1Q8TC90 406 aaPredicted RBP33.36■■■□□ 2.93
ATXN3-252ENST00000620536 DDX54Q8TDD1 881 aaKnown RBP33.34■■■□□ 2.93
ATXN3-252ENST00000620536 NHSQ6T4R5 1651 aa33.33■■■□□ 2.93
ATXN3-252ENST00000620536 ANO8Q9HCE9 1232 aaPredicted RBP33.33■■■□□ 2.93
ATXN3-252ENST00000620536 CARD14Q9BXL6 1004 aa33.32■■■□□ 2.92
ATXN3-252ENST00000620536 SPON1Q9HCB6 807 aa33.32■■■□□ 2.92
ATXN3-252ENST00000620536 KIF20BQ96Q89 1820 aa33.3■■■□□ 2.92
ATXN3-252ENST00000620536 NSD3Q9BZ95 1437 aa33.3■■■□□ 2.92
ATXN3-252ENST00000620536 MYOM1P52179 1685 aa33.29■■■□□ 2.92
ATXN3-252ENST00000620536 SMG6Q86US8 1419 aaKnown RBP33.29■■■□□ 2.92
ATXN3-252ENST00000620536 STK32BQ9NY57 414 aa33.29■■■□□ 2.92
ATXN3-252ENST00000620536 POLR3GLQ9BT43 218 aa33.28■■■□□ 2.92
ATXN3-252ENST00000620536 NBPF6Q5VWK0 638 aa33.26■■■□□ 2.91
ATXN3-252ENST00000620536 ZCRB1Q8TBF4 217 aaKnown RBP33.26■■■□□ 2.91
ATXN3-252ENST00000620536 NBPF4Q96M43 638 aa33.26■■■□□ 2.91
ATXN3-252ENST00000620536 PPP1R1BQ9UD71 204 aaPredicted RBP33.26■■■□□ 2.91
ATXN3-252ENST00000620536 EIF4G2P78344 907 aaKnown RBP eCLIP33.25■■■□□ 2.91
ATXN3-252ENST00000620536 HSP90AB2PQ58FF8 381 aa33.24■■■□□ 2.91
ATXN3-252ENST00000620536 INSRP06213 1382 aa33.23■■■□□ 2.91
ATXN3-252ENST00000620536 FLT4P35916 1363 aa33.23■■■□□ 2.91
ATXN3-252ENST00000620536 KIF24Q5T7B8 1368 aa33.23■■■□□ 2.91
ATXN3-252ENST00000620536 SLC15A2Q16348 729 aa33.23■■■□□ 2.91
ATXN3-252ENST00000620536 RGPD2P0DJD1 1756 aa33.22■■■□□ 2.91
ATXN3-252ENST00000620536 USHBP1Q8N6Y0 703 aa33.22■■■□□ 2.91
ATXN3-252ENST00000620536 RAPGEF4Q8WZA2 1011 aa33.21■■■□□ 2.91
ATXN3-252ENST00000620536 CGNL1Q0VF96 1302 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms