RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
CDH23-213ENST00000619887 AMOTL2Q9Y2J4 779 aa12.32□□□□□ -0.44
CDH23-213ENST00000619887 RLBP1P12271 317 aa12.31□□□□□ -0.44
CDH23-213ENST00000619887 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
CDH23-213ENST00000619887 ACEP12821 1306 aa12.31□□□□□ -0.44
CDH23-213ENST00000619887 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
CDH23-213ENST00000619887 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
CDH23-213ENST00000619887 TULP4Q9NRJ4 1543 aa12.31□□□□□ -0.44
CDH23-213ENST00000619887 MED14O60244 1454 aa12.3□□□□□ -0.44
CDH23-213ENST00000619887 CDC45O75419 566 aa12.3□□□□□ -0.44
CDH23-213ENST00000619887 PSME1Q06323 249 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 KCNJ4P48050 445 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 TEFQ10587 303 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
CDH23-213ENST00000619887 PLEKHF1Q96S99 279 aa12.28□□□□□ -0.44
CDH23-213ENST00000619887 PHF23Q9BUL5 403 aaPredicted RBP12.28□□□□□ -0.44
CDH23-213ENST00000619887 PIK3C2BO00750 1634 aa12.28□□□□□ -0.44
CDH23-213ENST00000619887 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
CDH23-213ENST00000619887 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
CDH23-213ENST00000619887 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
CDH23-213ENST00000619887 AGLP35573 1532 aa12.28□□□□□ -0.44
CDH23-213ENST00000619887 FBLN1P23142 703 aa12.28□□□□□ -0.44
CDH23-213ENST00000619887 CCT4P50991 539 aaKnown RBP12.28□□□□□ -0.44
CDH23-213ENST00000619887 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
CDH23-213ENST00000619887 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
CDH23-213ENST00000619887 MYOM1P52179 1685 aa12.27□□□□□ -0.44
CDH23-213ENST00000619887 REC8O95072 547 aa12.27□□□□□ -0.44
CDH23-213ENST00000619887 GNAI3P08754 354 aa12.27□□□□□ -0.44
CDH23-213ENST00000619887 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.44
CDH23-213ENST00000619887 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.44
CDH23-213ENST00000619887 TNNQ9UQP3 1299 aa12.27□□□□□ -0.44
CDH23-213ENST00000619887 IL13P35225 146 aa12.27□□□□□ -0.45
CDH23-213ENST00000619887 FAM135BQ49AJ0 1406 aa12.27□□□□□ -0.45
CDH23-213ENST00000619887 ST18O60284 1047 aa12.27□□□□□ -0.45
CDH23-213ENST00000619887 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
CDH23-213ENST00000619887 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
CDH23-213ENST00000619887 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
CDH23-213ENST00000619887 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
CDH23-213ENST00000619887 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
CDH23-213ENST00000619887 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
CDH23-213ENST00000619887 FGD1P98174 961 aa12.26□□□□□ -0.45
CDH23-213ENST00000619887 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
CDH23-213ENST00000619887 PREX1Q8TCU6 1659 aa12.26□□□□□ -0.45
CDH23-213ENST00000619887 PTPRCP08575 1304 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 VAMP4O75379 141 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 USP32Q8NFA0 1604 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 PTPRMP28827 1452 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 SMC5Q8IY18 1101 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 TBC1D32Q96NH3 1257 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 NAP1L2Q9ULW6 460 aaPredicted RBP12.25□□□□□ -0.45
CDH23-213ENST00000619887 EIF4A2Q14240 407 aaKnown RBP12.25□□□□□ -0.45
CDH23-213ENST00000619887 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
CDH23-213ENST00000619887 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
CDH23-213ENST00000619887 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
CDH23-213ENST00000619887 MCM10Q7L590 875 aa12.24□□□□□ -0.45
CDH23-213ENST00000619887 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
CDH23-213ENST00000619887 METP08581 1390 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 NUCB1Q02818 461 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 GNAI2P04899 355 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 BMP2KLQ5H9B9 411 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
CDH23-213ENST00000619887 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 FLT4P35916 1363 aa12.23□□□□□ -0.45
CDH23-213ENST00000619887 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
CDH23-213ENST00000619887 GOLGA6L3A6NEY3 463 aa12.22□□□□□ -0.45
CDH23-213ENST00000619887 ARHGEF28Q8N1W1 1705 aaKnown RBP12.22□□□□□ -0.45
CDH23-213ENST00000619887 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
CDH23-213ENST00000619887 PLEKHG1Q9ULL1 1385 aa12.22□□□□□ -0.45
CDH23-213ENST00000619887 FAM83GA6ND36 823 aa12.22□□□□□ -0.45
CDH23-213ENST00000619887 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
CDH23-213ENST00000619887 SKOR2Q2VWA4 1001 aaPredicted RBP12.21□□□□□ -0.45
CDH23-213ENST00000619887 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
CDH23-213ENST00000619887 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
CDH23-213ENST00000619887 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.45
CDH23-213ENST00000619887 IQSEC2Q5JU85 1478 aa12.21□□□□□ -0.45
CDH23-213ENST00000619887 RICTORQ6R327 1708 aa12.21□□□□□ -0.45
CDH23-213ENST00000619887 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
CDH23-213ENST00000619887 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.46
CDH23-213ENST00000619887 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.46
CDH23-213ENST00000619887 NECTIN2Q92692 538 aa12.21□□□□□ -0.46
CDH23-213ENST00000619887 TMEM131LA2VDJ0 1609 aa12.21□□□□□ -0.46
CDH23-213ENST00000619887 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.46
CDH23-213ENST00000619887 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
CDH23-213ENST00000619887 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
CDH23-213ENST00000619887 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
CDH23-213ENST00000619887 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
CDH23-213ENST00000619887 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms