RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 TXNDC2Q86VQ3 553 aa8.36□□□□□ -1.07
CBWD3-215ENST00000619322 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
CBWD3-215ENST00000619322 TUBGCP6Q96RT7 1819 aa8.35□□□□□ -1.07
CBWD3-215ENST00000619322 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
CBWD3-215ENST00000619322 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
CBWD3-215ENST00000619322 KIAA1551Q9HCM1 1747 aa8.35□□□□□ -1.07
CBWD3-215ENST00000619322 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
CBWD3-215ENST00000619322 USP19O94966 1318 aa8.34□□□□□ -1.07
CBWD3-215ENST00000619322 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
CBWD3-215ENST00000619322 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
CBWD3-215ENST00000619322 PDCD7Q8N8D1 485 aaKnown RBP8.34□□□□□ -1.07
CBWD3-215ENST00000619322 SGIP1Q9BQI5 828 aa8.34□□□□□ -1.07
CBWD3-215ENST00000619322 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
CBWD3-215ENST00000619322 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.07
CBWD3-215ENST00000619322 USP31Q70CQ4 1352 aa8.33□□□□□ -1.08
CBWD3-215ENST00000619322 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
CBWD3-215ENST00000619322 TIE1P35590 1138 aa8.33□□□□□ -1.08
CBWD3-215ENST00000619322 GGT6Q6P531 493 aa8.33□□□□□ -1.08
CBWD3-215ENST00000619322 COL5A3P25940 1745 aaPredicted RBP8.33□□□□□ -1.08
CBWD3-215ENST00000619322 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
CBWD3-215ENST00000619322 KIF24Q5T7B8 1368 aa8.32□□□□□ -1.08
CBWD3-215ENST00000619322 ILDR2Q71H61 639 aa8.32□□□□□ -1.08
CBWD3-215ENST00000619322 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
CBWD3-215ENST00000619322 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
CBWD3-215ENST00000619322 LAMB1P07942 1786 aa8.3□□□□□ -1.08
CBWD3-215ENST00000619322 BRINP3Q76B58 766 aa8.3□□□□□ -1.08
CBWD3-215ENST00000619322 METRNQ9UJH8 293 aa8.29□□□□□ -1.08
CBWD3-215ENST00000619322 CPSF1Q10570 1443 aaKnown RBP8.29□□□□□ -1.08
CBWD3-215ENST00000619322 IRX5P78411 483 aaPredicted RBP8.29□□□□□ -1.08
CBWD3-215ENST00000619322 NSD2O96028 1365 aa8.28□□□□□ -1.08
CBWD3-215ENST00000619322 NRXN2Q9P2S2 1712 aa8.28□□□□□ -1.08
CBWD3-215ENST00000619322 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
CBWD3-215ENST00000619322 MAP2P11137 1827 aaKnown RBP8.28□□□□□ -1.08
CBWD3-215ENST00000619322 SMG6Q86US8 1419 aaKnown RBP8.28□□□□□ -1.08
CBWD3-215ENST00000619322 LRRC59Q96AG4 307 aaKnown RBP8.28□□□□□ -1.08
CBWD3-215ENST00000619322 NPHP3Q7Z494 1330 aa8.28□□□□□ -1.08
CBWD3-215ENST00000619322 VIRMAQ69YN4 1812 aaKnown RBP8.28□□□□□ -1.08
CBWD3-215ENST00000619322 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.09
CBWD3-215ENST00000619322 DUOX1Q9NRD9 1551 aa8.27□□□□□ -1.09
CBWD3-215ENST00000619322 SIPA1L3O60292 1781 aaPredicted RBP8.27□□□□□ -1.09
CBWD3-215ENST00000619322 UBR2Q8IWV8 1755 aa8.27□□□□□ -1.09
CBWD3-215ENST00000619322 SPATA31A3Q5VYP0 1347 aa8.27□□□□□ -1.09
CBWD3-215ENST00000619322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.09
CBWD3-215ENST00000619322 MLECQ14165 292 aa8.26□□□□□ -1.09
CBWD3-215ENST00000619322 TTBK1Q5TCY1 1321 aaPredicted RBP8.25□□□□□ -1.09
CBWD3-215ENST00000619322 HMGB2P26583 209 aaKnown RBP8.25□□□□□ -1.09
CBWD3-215ENST00000619322 PLCB2Q00722 1185 aa8.25□□□□□ -1.09
CBWD3-215ENST00000619322 ZNF777Q9ULD5 760 aaPredicted RBP8.25□□□□□ -1.09
CBWD3-215ENST00000619322 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
CBWD3-215ENST00000619322 CHD4Q14839 1912 aa8.24□□□□□ -1.09
CBWD3-215ENST00000619322 RGPD5Q99666 1765 aa8.24□□□□□ -1.09
CBWD3-215ENST00000619322 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
CBWD3-215ENST00000619322 RTL1A6NKG5 1358 aa8.24□□□□□ -1.09
CBWD3-215ENST00000619322 RBM6P78332 1123 aaKnown RBP8.24□□□□□ -1.09
CBWD3-215ENST00000619322 VPS72Q15906 364 aa8.23□□□□□ -1.09
CBWD3-215ENST00000619322 BBXQ8WY36 941 aaPredicted RBP8.23□□□□□ -1.09
CBWD3-215ENST00000619322 THRAP3Q9Y2W1 955 aaKnown RBP8.23□□□□□ -1.09
CBWD3-215ENST00000619322 BTAF1O14981 1849 aa8.23□□□□□ -1.09
CBWD3-215ENST00000619322 TMEM92Q6UXU6 159 aa8.23□□□□□ -1.09
CBWD3-215ENST00000619322 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
CBWD3-215ENST00000619322 TOGARAM1Q9Y4F4 1720 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 MKRN3Q13064 507 aaKnown RBP8.22□□□□□ -1.09
CBWD3-215ENST00000619322 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 CD163L1Q9NR16 1453 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 GOLGA2Q08379 1002 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 C10orf71Q711Q0 1435 aa8.22□□□□□ -1.09
CBWD3-215ENST00000619322 KDM2AQ9Y2K7 1162 aa8.21□□□□□ -1.09
CBWD3-215ENST00000619322 RRP7BPQ9NSQ0 103 aa8.21□□□□□ -1.1
CBWD3-215ENST00000619322 AMOTL2Q9Y2J4 779 aa8.21□□□□□ -1.1
CBWD3-215ENST00000619322 COL5A2P05997 1499 aaPredicted RBP8.2□□□□□ -1.1
CBWD3-215ENST00000619322 MRC1P22897 1456 aa8.2□□□□□ -1.1
CBWD3-215ENST00000619322 THSD7BQ9C0I4 1608 aa8.2□□□□□ -1.1
CBWD3-215ENST00000619322 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
CBWD3-215ENST00000619322 DOT1LQ8TEK3 1739 aa8.19□□□□□ -1.1
CBWD3-215ENST00000619322 OVOS2A0A0J9YW53 1432 aa8.19□□□□□ -1.1
CBWD3-215ENST00000619322 TNS2Q63HR2 1409 aa8.19□□□□□ -1.1
CBWD3-215ENST00000619322 OVOS2Q6IE36 1432 aa8.19□□□□□ -1.1
CBWD3-215ENST00000619322 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
CBWD3-215ENST00000619322 BCORQ6W2J9 1755 aa8.19□□□□□ -1.1
CBWD3-215ENST00000619322 ITGB4P16144 1822 aa8.18□□□□□ -1.1
CBWD3-215ENST00000619322 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.1
CBWD3-215ENST00000619322 UBR3Q6ZT12 1888 aa8.18□□□□□ -1.1
CBWD3-215ENST00000619322 USP6P35125 1406 aa8.18□□□□□ -1.1
CBWD3-215ENST00000619322 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
CBWD3-215ENST00000619322 TRPC5Q9UL62 973 aaPredicted RBP8.18□□□□□ -1.1
CBWD3-215ENST00000619322 SEC24BO95487 1268 aa8.17□□□□□ -1.1
CBWD3-215ENST00000619322 SCN11AQ9UI33 1791 aa8.17□□□□□ -1.1
CBWD3-215ENST00000619322 C4AP0C0L4 1744 aa8.17□□□□□ -1.1
CBWD3-215ENST00000619322 C4BP0C0L5 1744 aa8.17□□□□□ -1.1
CBWD3-215ENST00000619322 HAP1P54257 671 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-215ENST00000619322 ATF3P18847 181 aa8.16□□□□□ -1.1
CBWD3-215ENST00000619322 TNRC6CQ9HCJ0 1690 aaKnown RBP8.16□□□□□ -1.1
CBWD3-215ENST00000619322 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
CBWD3-215ENST00000619322 NGLY1Q96IV0 654 aa8.16□□□□□ -1.1
CBWD3-215ENST00000619322 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
CBWD3-215ENST00000619322 LAMB4A4D0S4 1761 aa8.16□□□□□ -1.1
CBWD3-215ENST00000619322 TTC21AQ8NDW8 1320 aa8.15□□□□□ -1.1
CBWD3-215ENST00000619322 PSME1Q06323 249 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms