RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 PUS7Q96PZ0 661 aaKnown RBP3.67□□□□□ -1.82
NEB-220ENST00000618972 TMCO5BA8MYB1 307 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 OFD1O75665 1012 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 CHGBP05060 677 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 ATP2B3Q16720 1220 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 OTUD7BQ6GQQ9 843 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 UNC5CLQ8IV45 518 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 SLC26A8Q96RN1 970 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 AP5Z1O43299 807 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.67□□□□□ -1.82
NEB-220ENST00000618972 CCDC173Q0VFZ6 552 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 IVLP07476 585 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 GBP3Q9H0R5 595 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 NF2P35240 595 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 CCDC50Q8IVM0 306 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 PYCARDQ9ULZ3 195 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 PRKAR2BP31323 418 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 SDSP20132 328 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 PDCP20941 246 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 KIF16BQ96L93 1317 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 SASS6Q6UVJ0 657 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 HOMER1Q86YM7 354 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 UTP14CQ5TAP6 766 aaKnown RBP3.67□□□□□ -1.82
NEB-220ENST00000618972 RAPGEF3O95398 923 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 CCDC83Q8IWF9 413 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 MAPK8IP3Q9UPT6 1336 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 VGLL3A8MV65 326 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 RAD54L2Q9Y4B4 1467 aa3.67□□□□□ -1.82
NEB-220ENST00000618972 TUBB2AQ13885 445 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 ZNF592Q92610 1267 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 TUBB2BQ9BVA1 445 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 TRMT1Q9NXH9 659 aaKnown RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 LMOD3Q0VAK6 560 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 RAB11FIP4Q86YS3 637 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 NME9Q86XW9 330 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 ERLIN1O75477 346 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 OS9Q13438 667 aaPredicted RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 PPM1EQ8WY54 764 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 EIF3JO75822 258 aaKnown RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 SH3BGRP55822 239 aaPredicted RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 SH2D4BQ5SQS7 431 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 JAKMIP3Q5VZ66 844 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 SYCE3A1L190 88 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 ZSCAN30Q86W11 494 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 MEIS3Q99687 375 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 PIP4K2AP48426 406 aaPredicted RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 NASPP49321 788 aaPredicted RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 PALD1Q9ULE6 856 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 COBLO75128 1261 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 TAF6LQ9Y6J9 622 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 KCNJ4P48050 445 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 AKAP17AQ02040 695 aaKnown RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 ZSCAN23Q3MJ62 389 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 GOLGA3Q08378 1498 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 LUZP1Q86V48 1076 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 GPHNQ9NQX3 736 aaPredicted RBP3.66□□□□□ -1.82
NEB-220ENST00000618972 GIMAP7Q8NHV1 300 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 RUFY2Q8WXA3 655 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 DNAAF4Q8WXU2 420 aa3.66□□□□□ -1.82
NEB-220ENST00000618972 WDR63Q8IWG1 891 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 EMILIN1Q9Y6C2 1016 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 SEPT14Q6ZU15 432 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 USH1CQ9Y6N9 552 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 MBD3O95983 291 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 CNKSR2Q8WXI2 1034 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 ROCK2O75116 1388 aaKnown RBP3.65□□□□□ -1.82
NEB-220ENST00000618972 RASEFQ8IZ41 740 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 B4GALNT4Q76KP1 1039 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 EDC3Q96F86 508 aaKnown RBP3.65□□□□□ -1.82
NEB-220ENST00000618972 GTF2A1P52655 376 aaPredicted RBP3.65□□□□□ -1.82
NEB-220ENST00000618972 IDI1Q13907 227 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 FERMT3Q86UX7 667 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 STAG3Q9UJ98 1225 aa3.65□□□□□ -1.82
NEB-220ENST00000618972 DISP3Q9P2K9 1392 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 GOLGA8FQ08AF8 430 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 GOLGA8DPQ0D2H9 430 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 SETDB1Q15047 1291 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 ATF7IPQ6VMQ6 1270 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 TMX3Q96JJ7 454 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 TMEM63CQ9P1W3 806 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 WDR97A6NE52 1622 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 MVPQ14764 893 aaKnown RBP3.65□□□□□ -1.83
NEB-220ENST00000618972 TMEM132AQ24JP5 1023 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 LUC7LQ9NQ29 371 aaKnown RBP3.65□□□□□ -1.83
NEB-220ENST00000618972 SPG7Q9UQ90 795 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 SMTNL1A8MU46 457 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 CIZ1Q9ULV3 898 aaPredicted RBP3.65□□□□□ -1.83
NEB-220ENST00000618972 KIF18AQ8NI77 898 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 CENPHQ9H3R5 247 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 EXOC6BQ9Y2D4 811 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 GBP2P32456 591 aaPredicted RBP3.65□□□□□ -1.83
NEB-220ENST00000618972 GUCY1B3Q02153 619 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 IQCEQ6IPM2 695 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 CFAP45Q9UL16 551 aa3.65□□□□□ -1.83
NEB-220ENST00000618972 SULT6B1Q6IMI4 303 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 OGFRQ9NZT2 677 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 POLKQ9UBT6 870 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 DIAPH1O60610 1272 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 CUX2O14529 1486 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms