RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 C1QTNF8P60827 252 aa9.73□□□□□ -0.85
SNX25-207ENST00000618785 PLCH1Q4KWH8 1693 aa9.73□□□□□ -0.85
SNX25-207ENST00000618785 NFAT5O94916 1531 aa9.73□□□□□ -0.85
SNX25-207ENST00000618785 VPS72Q15906 364 aa9.73□□□□□ -0.85
SNX25-207ENST00000618785 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.72□□□□□ -0.85
SNX25-207ENST00000618785 NSD2O96028 1365 aa9.72□□□□□ -0.85
SNX25-207ENST00000618785 EVA1CP58658 441 aa9.72□□□□□ -0.85
SNX25-207ENST00000618785 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
SNX25-207ENST00000618785 CCDC9Q9Y3X0 531 aaKnown RBP9.72□□□□□ -0.85
SNX25-207ENST00000618785 KIF20BQ96Q89 1820 aa9.72□□□□□ -0.85
SNX25-207ENST00000618785 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
SNX25-207ENST00000618785 ABCC6O95255 1503 aa9.71□□□□□ -0.86
SNX25-207ENST00000618785 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
SNX25-207ENST00000618785 STRN4Q9NRL3 753 aa9.71□□□□□ -0.86
SNX25-207ENST00000618785 LMO7Q8WWI1 1683 aa9.7□□□□□ -0.86
SNX25-207ENST00000618785 CAMTA1Q9Y6Y1 1673 aa9.7□□□□□ -0.86
SNX25-207ENST00000618785 NRAPQ86VF7 1730 aa9.7□□□□□ -0.86
SNX25-207ENST00000618785 AMPHP49418 695 aa9.69□□□□□ -0.86
SNX25-207ENST00000618785 NCBP3Q53F19 620 aaKnown RBP9.69□□□□□ -0.86
SNX25-207ENST00000618785 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
SNX25-207ENST00000618785 IP6K1Q92551 441 aa9.69□□□□□ -0.86
SNX25-207ENST00000618785 COL5A2P05997 1499 aaPredicted RBP9.68□□□□□ -0.86
SNX25-207ENST00000618785 MAP3K19Q56UN5 1328 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 SPATA31A5Q5VU36 1347 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 SPATA31A7Q8IWB4 1347 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 AMER1Q5JTC6 1135 aaPredicted RBP9.68□□□□□ -0.86
SNX25-207ENST00000618785 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 CSB-PGBD3P0DP91 1061 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 COL18A1P39060 1754 aa9.68□□□□□ -0.86
SNX25-207ENST00000618785 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 LARP1Q6PKG0 1096 aaKnown RBP9.67□□□□□ -0.86
SNX25-207ENST00000618785 WDR17Q8IZU2 1322 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
SNX25-207ENST00000618785 SPATA31A1Q5TZJ5 1347 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 ANKRD26Q9UPS8 1709 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 FBLN1P23142 703 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 TOM1L2Q6ZVM7 507 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 CRB1P82279 1406 aa9.67□□□□□ -0.86
SNX25-207ENST00000618785 HOXC9P31274 260 aa9.66□□□□□ -0.86
SNX25-207ENST00000618785 GLI3P10071 1580 aa9.66□□□□□ -0.86
SNX25-207ENST00000618785 LTN1O94822 1766 aa9.66□□□□□ -0.86
SNX25-207ENST00000618785 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
SNX25-207ENST00000618785 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
SNX25-207ENST00000618785 FLT4P35916 1363 aa9.66□□□□□ -0.86
SNX25-207ENST00000618785 TCP11L2Q8N4U5 519 aa9.65□□□□□ -0.86
SNX25-207ENST00000618785 ERBB3P21860 1342 aa9.65□□□□□ -0.86
SNX25-207ENST00000618785 A0A0G2JS52 829 aa9.65□□□□□ -0.86
SNX25-207ENST00000618785 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
SNX25-207ENST00000618785 TNNT2P45379 298 aaPredicted RBP9.65□□□□□ -0.86
SNX25-207ENST00000618785 MYT1Q01538 1121 aa9.65□□□□□ -0.86
SNX25-207ENST00000618785 CARD10Q9BWT7 1032 aa9.65□□□□□ -0.86
SNX25-207ENST00000618785 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.87
SNX25-207ENST00000618785 CC2D1BQ5T0F9 858 aaKnown RBP9.65□□□□□ -0.87
SNX25-207ENST00000618785 BARGINQ6ZT62 677 aa9.65□□□□□ -0.87
SNX25-207ENST00000618785 USP35Q9P2H5 1018 aa9.65□□□□□ -0.87
SNX25-207ENST00000618785 EMILIN1Q9Y6C2 1016 aa9.65□□□□□ -0.87
SNX25-207ENST00000618785 PPM1GO15355 546 aaPredicted RBP9.64□□□□□ -0.87
SNX25-207ENST00000618785 INSRP06213 1382 aa9.64□□□□□ -0.87
SNX25-207ENST00000618785 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
SNX25-207ENST00000618785 SEPT12Q8IYM1 358 aa9.64□□□□□ -0.87
SNX25-207ENST00000618785 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
SNX25-207ENST00000618785 LTV1Q96GA3 475 aaPredicted RBP9.64□□□□□ -0.87
SNX25-207ENST00000618785 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
SNX25-207ENST00000618785 POLKQ9UBT6 870 aa9.64□□□□□ -0.87
SNX25-207ENST00000618785 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
SNX25-207ENST00000618785 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
SNX25-207ENST00000618785 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
SNX25-207ENST00000618785 RGPD5Q99666 1765 aa9.63□□□□□ -0.87
SNX25-207ENST00000618785 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
SNX25-207ENST00000618785 CNGB1Q14028 1251 aaPredicted RBP9.61□□□□□ -0.87
SNX25-207ENST00000618785 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
SNX25-207ENST00000618785 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
SNX25-207ENST00000618785 BAG6P46379 1132 aa9.6□□□□□ -0.87
SNX25-207ENST00000618785 KRT27Q7Z3Y8 459 aa9.6□□□□□ -0.87
SNX25-207ENST00000618785 THSD7AQ9UPZ6 1657 aa9.6□□□□□ -0.87
SNX25-207ENST00000618785 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
SNX25-207ENST00000618785 PDE3BQ13370 1112 aa9.59□□□□□ -0.87
SNX25-207ENST00000618785 IL2RBP14784 551 aa9.59□□□□□ -0.87
SNX25-207ENST00000618785 KCNA4P22459 653 aa9.59□□□□□ -0.87
SNX25-207ENST00000618785 MTHFSP49914 203 aa9.59□□□□□ -0.87
SNX25-207ENST00000618785 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
SNX25-207ENST00000618785 DDB1Q16531 1140 aa9.59□□□□□ -0.87
SNX25-207ENST00000618785 DISP2A7MBM2 1401 aa9.58□□□□□ -0.88
SNX25-207ENST00000618785 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
SNX25-207ENST00000618785 DEFB132Q7Z7B7 95 aa9.58□□□□□ -0.88
SNX25-207ENST00000618785 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
SNX25-207ENST00000618785 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
SNX25-207ENST00000618785 EXOC5O00471 708 aa9.57□□□□□ -0.88
SNX25-207ENST00000618785 RAPGEF4Q8WZA2 1011 aa9.57□□□□□ -0.88
SNX25-207ENST00000618785 PARP4Q9UKK3 1724 aaKnown RBP9.57□□□□□ -0.88
SNX25-207ENST00000618785 RALBP1Q15311 655 aa9.57□□□□□ -0.88
SNX25-207ENST00000618785 CFAP53Q96M91 514 aa9.57□□□□□ -0.88
SNX25-207ENST00000618785 TATP17735 454 aaPredicted RBP9.56□□□□□ -0.88
SNX25-207ENST00000618785 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
SNX25-207ENST00000618785 EYA1Q99502 592 aa9.56□□□□□ -0.88
SNX25-207ENST00000618785 PARD3Q8TEW0 1356 aa9.56□□□□□ -0.88
SNX25-207ENST00000618785 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms