RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
SHANK2-221ENST00000618363 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
SHANK2-221ENST00000618363 NME9Q86XW9 330 aa16.33■□□□□ 0.2
SHANK2-221ENST00000618363 CRB1P82279 1406 aa16.33■□□□□ 0.2
SHANK2-221ENST00000618363 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
SHANK2-221ENST00000618363 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.2
SHANK2-221ENST00000618363 A0A1W2PP64 1363 aa16.32■□□□□ 0.2
SHANK2-221ENST00000618363 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
SHANK2-221ENST00000618363 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
SHANK2-221ENST00000618363 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
SHANK2-221ENST00000618363 DEFB132Q7Z7B7 95 aa16.31■□□□□ 0.2
SHANK2-221ENST00000618363 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
SHANK2-221ENST00000618363 WDR17Q8IZU2 1322 aa16.3■□□□□ 0.2
SHANK2-221ENST00000618363 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-221ENST00000618363 COG3Q96JB2 828 aa16.3■□□□□ 0.2
SHANK2-221ENST00000618363 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
SHANK2-221ENST00000618363 CDCA7Q9BWT1 371 aaPredicted RBP16.29■□□□□ 0.2
SHANK2-221ENST00000618363 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
SHANK2-221ENST00000618363 DDB1Q16531 1140 aa16.28■□□□□ 0.2
SHANK2-221ENST00000618363 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
SHANK2-221ENST00000618363 TRIM37O94972 964 aa16.27■□□□□ 0.2
SHANK2-221ENST00000618363 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
SHANK2-221ENST00000618363 CARD10Q9BWT7 1032 aa16.26■□□□□ 0.19
SHANK2-221ENST00000618363 EP400Q96L91 3159 aa16.26■□□□□ 0.19
SHANK2-221ENST00000618363 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
SHANK2-221ENST00000618363 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
SHANK2-221ENST00000618363 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
SHANK2-221ENST00000618363 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
SHANK2-221ENST00000618363 NFAT5O94916 1531 aa16.24■□□□□ 0.19
SHANK2-221ENST00000618363 COL18A1P39060 1754 aa16.24■□□□□ 0.19
SHANK2-221ENST00000618363 APBA3O96018 575 aa16.24■□□□□ 0.19
SHANK2-221ENST00000618363 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHANK2-221ENST00000618363 EN1Q05925 392 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-221ENST00000618363 CCDC7Q96M83 1385 aa16.24■□□□□ 0.19
SHANK2-221ENST00000618363 EXOC5O00471 708 aa16.23■□□□□ 0.19
SHANK2-221ENST00000618363 AMPHP49418 695 aa16.23■□□□□ 0.19
SHANK2-221ENST00000618363 ABCC6O95255 1503 aa16.23■□□□□ 0.19
SHANK2-221ENST00000618363 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
SHANK2-221ENST00000618363 RGPD5Q99666 1765 aa16.22■□□□□ 0.19
SHANK2-221ENST00000618363 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
SHANK2-221ENST00000618363 ERBB3P21860 1342 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 PARP4Q9UKK3 1724 aaKnown RBP16.2■□□□□ 0.18
SHANK2-221ENST00000618363 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-221ENST00000618363 IP6K1Q92551 441 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-221ENST00000618363 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 LTN1O94822 1766 aa16.2■□□□□ 0.18
SHANK2-221ENST00000618363 FYB1O15117 783 aa16.18■□□□□ 0.18
SHANK2-221ENST00000618363 IL2RBP14784 551 aa16.18■□□□□ 0.18
SHANK2-221ENST00000618363 EZH2Q15910 746 aaKnown RBP16.18■□□□□ 0.18
SHANK2-221ENST00000618363 PARD3Q8TEW0 1356 aa16.17■□□□□ 0.18
SHANK2-221ENST00000618363 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
SHANK2-221ENST00000618363 HSPA5P11021 654 aaKnown RBP16.16■□□□□ 0.18
SHANK2-221ENST00000618363 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
SHANK2-221ENST00000618363 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
SHANK2-221ENST00000618363 HOXC9P31274 260 aa16.15■□□□□ 0.18
SHANK2-221ENST00000618363 MARCH10Q8NA82 808 aaPredicted RBP16.15■□□□□ 0.18
SHANK2-221ENST00000618363 CAMKK2Q96RR4 588 aa16.15■□□□□ 0.18
SHANK2-221ENST00000618363 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
SHANK2-221ENST00000618363 PSDA5PKW4 1024 aaPredicted RBP16.14■□□□□ 0.17
SHANK2-221ENST00000618363 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
SHANK2-221ENST00000618363 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
SHANK2-221ENST00000618363 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
SHANK2-221ENST00000618363 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
SHANK2-221ENST00000618363 SMG6Q86US8 1419 aaKnown RBP16.13■□□□□ 0.17
SHANK2-221ENST00000618363 NSD3Q9BZ95 1437 aa16.13■□□□□ 0.17
SHANK2-221ENST00000618363 FBLN1P23142 703 aa16.13■□□□□ 0.17
SHANK2-221ENST00000618363 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
SHANK2-221ENST00000618363 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
SHANK2-221ENST00000618363 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
SHANK2-221ENST00000618363 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
SHANK2-221ENST00000618363 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
SHANK2-221ENST00000618363 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
SHANK2-221ENST00000618363 PLSCR1O15162 318 aa16.1■□□□□ 0.17
SHANK2-221ENST00000618363 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
SHANK2-221ENST00000618363 FAM208AQ9UK61 1670 aaKnown RBP16.09■□□□□ 0.17
SHANK2-221ENST00000618363 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
SHANK2-221ENST00000618363 BCL9O00512 1426 aa16.09■□□□□ 0.17
SHANK2-221ENST00000618363 RAPGEF4Q8WZA2 1011 aa16.08■□□□□ 0.16
SHANK2-221ENST00000618363 KIF24Q5T7B8 1368 aa16.08■□□□□ 0.16
SHANK2-221ENST00000618363 MYOM1P52179 1685 aa16.08■□□□□ 0.16
SHANK2-221ENST00000618363 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
SHANK2-221ENST00000618363 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
SHANK2-221ENST00000618363 PANK3Q9H999 370 aa16.07■□□□□ 0.16
SHANK2-221ENST00000618363 FLT4P35916 1363 aa16.07■□□□□ 0.16
SHANK2-221ENST00000618363 PEAK1Q9H792 1746 aa16.07■□□□□ 0.16
SHANK2-221ENST00000618363 HSP90AB2PQ58FF8 381 aa16.06■□□□□ 0.16
SHANK2-221ENST00000618363 SBF2Q86WG5 1849 aa16.05■□□□□ 0.16
SHANK2-221ENST00000618363 INSRP06213 1382 aa16.05■□□□□ 0.16
SHANK2-221ENST00000618363 TATP17735 454 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-221ENST00000618363 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
SHANK2-221ENST00000618363 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-221ENST00000618363 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
SHANK2-221ENST00000618363 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
SHANK2-221ENST00000618363 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
SHANK2-221ENST00000618363 KCNQ2O43526 872 aa16.03■□□□□ 0.16
SHANK2-221ENST00000618363 PTF1AQ7RTS3 328 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms