RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
SCAMP1-206ENST00000618166 ESCO1Q5FWF5 840 aa11.12□□□□□ -0.63
SCAMP1-206ENST00000618166 NBPF14Q5TI25 921 aa11.12□□□□□ -0.63
SCAMP1-206ENST00000618166 FHDC1Q9C0D6 1143 aaPredicted RBP11.12□□□□□ -0.63
SCAMP1-206ENST00000618166 CHD4Q14839 1912 aa11.12□□□□□ -0.63
SCAMP1-206ENST00000618166 SHANK3Q9BYB0 1731 aa11.11□□□□□ -0.63
SCAMP1-206ENST00000618166 PARD3Q8TEW0 1356 aa11.11□□□□□ -0.63
SCAMP1-206ENST00000618166 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
SCAMP1-206ENST00000618166 COL13A1Q5TAT6 717 aaPredicted RBP11.11□□□□□ -0.63
SCAMP1-206ENST00000618166 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
SCAMP1-206ENST00000618166 ZBTB7AO95365 584 aa11.1□□□□□ -0.63
SCAMP1-206ENST00000618166 PTGER2P43116 358 aa11.1□□□□□ -0.63
SCAMP1-206ENST00000618166 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
SCAMP1-206ENST00000618166 ROBO2Q9HCK4 1378 aa11.08□□□□□ -0.64
SCAMP1-206ENST00000618166 NWD2Q9ULI1 1742 aa11.08□□□□□ -0.64
SCAMP1-206ENST00000618166 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
SCAMP1-206ENST00000618166 HSPA6P17066 643 aa11.08□□□□□ -0.64
SCAMP1-206ENST00000618166 ANO8Q9HCE9 1232 aaPredicted RBP11.08□□□□□ -0.64
SCAMP1-206ENST00000618166 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
SCAMP1-206ENST00000618166 THSD7AQ9UPZ6 1657 aa11.07□□□□□ -0.64
SCAMP1-206ENST00000618166 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
SCAMP1-206ENST00000618166 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
SCAMP1-206ENST00000618166 HAP1P54257 671 aaPredicted RBP11.07□□□□□ -0.64
SCAMP1-206ENST00000618166 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
SCAMP1-206ENST00000618166 ZNF687Q8N1G0 1237 aa11.06□□□□□ -0.64
SCAMP1-206ENST00000618166 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
SCAMP1-206ENST00000618166 PRELPP51888 382 aa11.05□□□□□ -0.64
SCAMP1-206ENST00000618166 ABCC5O15440 1437 aa11.05□□□□□ -0.64
SCAMP1-206ENST00000618166 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
SCAMP1-206ENST00000618166 BTG4Q9NY30 223 aa11.04□□□□□ -0.64
SCAMP1-206ENST00000618166 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
SCAMP1-206ENST00000618166 FAM196AQ6ZSG2 479 aa11.03□□□□□ -0.64
SCAMP1-206ENST00000618166 CROCC2H7BZ55 1655 aa11.03□□□□□ -0.64
SCAMP1-206ENST00000618166 DLC1Q96QB1 1528 aa11.02□□□□□ -0.64
SCAMP1-206ENST00000618166 ABCA3Q99758 1704 aa11.02□□□□□ -0.65
SCAMP1-206ENST00000618166 SPATA31A5Q5VU36 1347 aa11.02□□□□□ -0.65
SCAMP1-206ENST00000618166 SPATA31A7Q8IWB4 1347 aa11.02□□□□□ -0.65
SCAMP1-206ENST00000618166 GPR162Q16538 588 aa11.02□□□□□ -0.65
SCAMP1-206ENST00000618166 CHIC2Q9UKJ5 165 aa11.02□□□□□ -0.65
SCAMP1-206ENST00000618166 GPR153Q6NV75 609 aa11□□□□□ -0.65
SCAMP1-206ENST00000618166 TNS4Q8IZW8 715 aa11□□□□□ -0.65
SCAMP1-206ENST00000618166 LRPPRCP42704 1394 aaKnown RBP11□□□□□ -0.65
SCAMP1-206ENST00000618166 TMEM92Q6UXU6 159 aa10.99□□□□□ -0.65
SCAMP1-206ENST00000618166 KRT28Q7Z3Y7 464 aa10.99□□□□□ -0.65
SCAMP1-206ENST00000618166 TNS3Q68CZ2 1445 aa10.98□□□□□ -0.65
SCAMP1-206ENST00000618166 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
SCAMP1-206ENST00000618166 ATP10DQ9P241 1426 aa10.98□□□□□ -0.65
SCAMP1-206ENST00000618166 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
SCAMP1-206ENST00000618166 DNAJC5GQ8N7S2 189 aa10.97□□□□□ -0.65
SCAMP1-206ENST00000618166 CCDC144AA2RUR9 1427 aa10.97□□□□□ -0.65
SCAMP1-206ENST00000618166 DAPK1P53355 1430 aa10.97□□□□□ -0.65
SCAMP1-206ENST00000618166 IQGAP3Q86VI3 1631 aa10.96□□□□□ -0.65
SCAMP1-206ENST00000618166 NEXMIFQ5QGS0 1516 aa10.96□□□□□ -0.65
SCAMP1-206ENST00000618166 E9PCH4 1651 aa10.96□□□□□ -0.65
SCAMP1-206ENST00000618166 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
SCAMP1-206ENST00000618166 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
SCAMP1-206ENST00000618166 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
SCAMP1-206ENST00000618166 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
SCAMP1-206ENST00000618166 NAIPQ13075 1403 aa10.94□□□□□ -0.66
SCAMP1-206ENST00000618166 ARXQ96QS3 562 aa10.94□□□□□ -0.66
SCAMP1-206ENST00000618166 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
SCAMP1-206ENST00000618166 SPATA31A1Q5TZJ5 1347 aa10.94□□□□□ -0.66
SCAMP1-206ENST00000618166 ANKRD30AQ9BXX3 1397 aa10.94□□□□□ -0.66
SCAMP1-206ENST00000618166 HFM1A2PYH4 1435 aa10.94□□□□□ -0.66
SCAMP1-206ENST00000618166 PCNTO95613 3336 aa10.93□□□□□ -0.66
SCAMP1-206ENST00000618166 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
SCAMP1-206ENST00000618166 BCL11BQ9C0K0 894 aaPredicted RBP10.93□□□□□ -0.66
SCAMP1-206ENST00000618166 TECPR2O15040 1411 aa10.93□□□□□ -0.66
SCAMP1-206ENST00000618166 COL14A1Q05707 1796 aaKnown RBP10.92□□□□□ -0.66
SCAMP1-206ENST00000618166 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
SCAMP1-206ENST00000618166 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
SCAMP1-206ENST00000618166 USP35Q9P2H5 1018 aa10.92□□□□□ -0.66
SCAMP1-206ENST00000618166 MAP3K5Q99683 1374 aa10.92□□□□□ -0.66
SCAMP1-206ENST00000618166 PDE3BQ13370 1112 aa10.91□□□□□ -0.66
SCAMP1-206ENST00000618166 MTFR1LQ9H019 292 aa10.91□□□□□ -0.66
SCAMP1-206ENST00000618166 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
SCAMP1-206ENST00000618166 RRBP1Q9P2E9 1410 aaKnown RBP10.91□□□□□ -0.66
SCAMP1-206ENST00000618166 KANK4Q5T7N3 995 aaPredicted RBP10.9□□□□□ -0.66
SCAMP1-206ENST00000618166 YBX3P16989 372 aaKnown RBP eCLIP10.9□□□□□ -0.67
SCAMP1-206ENST00000618166 ANKRD13DQ6ZTN6 518 aa10.9□□□□□ -0.67
SCAMP1-206ENST00000618166 NLGN2Q8NFZ4 835 aa10.9□□□□□ -0.67
SCAMP1-206ENST00000618166 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
SCAMP1-206ENST00000618166 APLP1P51693 650 aa10.89□□□□□ -0.67
SCAMP1-206ENST00000618166 WAPLQ7Z5K2 1190 aa10.89□□□□□ -0.67
SCAMP1-206ENST00000618166 STRN4Q9NRL3 753 aa10.89□□□□□ -0.67
SCAMP1-206ENST00000618166 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
SCAMP1-206ENST00000618166 SBNO1A3KN83 1393 aa10.88□□□□□ -0.67
SCAMP1-206ENST00000618166 HTRA3P83110 453 aa10.88□□□□□ -0.67
SCAMP1-206ENST00000618166 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
SCAMP1-206ENST00000618166 ANKRD50Q9ULJ7 1429 aa10.88□□□□□ -0.67
SCAMP1-206ENST00000618166 PLEKHH1Q9ULM0 1364 aa10.87□□□□□ -0.67
SCAMP1-206ENST00000618166 PLSCR1O15162 318 aa10.87□□□□□ -0.67
SCAMP1-206ENST00000618166 PSME1Q06323 249 aa10.87□□□□□ -0.67
SCAMP1-206ENST00000618166 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
SCAMP1-206ENST00000618166 RGPD3A6NKT7 1758 aaPredicted RBP10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 RGPD4Q7Z3J3 1758 aa10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 CHRNA2Q15822 529 aa10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 ARSIQ5FYB1 569 aa10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
SCAMP1-206ENST00000618166 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms