RNA–Protein interactions for RNA: ENST00000617708.1

GTF2IRD2B-207, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-207ENST00000617708 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 QPCTQ16769 361 aa11.62□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 TTLL8A6PVC2 850 aa11.61□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 MYSM1Q5VVJ2 828 aa11.61□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 RNF225M0QZC1 329 aaPredicted RBP11.6□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 LILRB3O75022 631 aa11.6□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 KCTD17Q8N5Z5 321 aa11.6□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 AK7Q96M32 723 aa11.6□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 GSK3AP49840 483 aa11.59□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 KRT76Q01546 638 aa11.59□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 PTSQ03393 145 aa11.59□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 CNTNAP3BQ96NU0 1288 aa11.59□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 CNTNAP3Q9BZ76 1288 aa11.59□□□□□ -0.55
GTF2IRD2B-207ENST00000617708 TMEM151AQ8N4L1 468 aa11.58□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 GPR161Q8N6U8 529 aaKnown RBP11.57□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 PPP1R26Q5T8A7 1209 aaPredicted RBP11.55□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 GDF11O95390 407 aa11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 RASSF7Q02833 373 aa11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 Q6ZVU0 165 aa11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 NANOS1Q8WY41 292 aaKnown RBP11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 ADAMTS8Q9UP79 889 aa11.54□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 SPINT1O43278 529 aa11.53□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
GTF2IRD2B-207ENST00000617708 CLK2P49760 499 aaKnown RBP11.52□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 CBLBQ13191 982 aa11.52□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 CDV3Q9UKY7 258 aaKnown RBP11.52□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 SVOPQ8N4V2 548 aa11.51□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 SLC10A4Q96EP9 437 aa11.51□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 DHX9Q08211 1270 aaKnown RBP11.5□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 PDE4DQ08499 809 aa11.5□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 ARHGAP9Q9BRR9 750 aa11.5□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 ZNF385CQ66K41 422 aaPredicted RBP11.49□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 SLC35F4A4IF30 521 aa11.48□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 PDXDC2PQ6P474 469 aa11.48□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 ITGA6P23229 1130 aa11.47□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
GTF2IRD2B-207ENST00000617708 CDC14CA4D256 554 aa11.45□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 SV2AQ7L0J3 742 aa11.45□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 FKBPLQ9UIM3 349 aa11.45□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 ZBTB33Q86T24 672 aa11.44□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 VWA5B2Q8N398 1253 aa11.44□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 CTSOP43234 321 aaPredicted RBP11.43□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 RELBQ01201 579 aa11.43□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 INSM2Q96T92 566 aaPredicted RBP11.42□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 POLMQ9NP87 494 aaPredicted RBP11.42□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 POLR3EQ9NVU0 708 aa11.42□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 DNMT3AQ9Y6K1 912 aaPredicted RBP11.41□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 RNF217Q8TC41 542 aa11.4□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 WHAMMQ8TF30 809 aa11.4□□□□□ -0.58
GTF2IRD2B-207ENST00000617708 ARHGEF15O94989 841 aa11.39□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 IRS1P35568 1242 aa11.39□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 MARSP56192 900 aaKnown RBP11.39□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 PTK2Q05397 1052 aa11.38□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 KANK3Q6NY19 840 aa11.38□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 GPSM3Q9Y4H4 160 aa11.37□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 IGHA1P01876 353 aa11.36□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 GPAT2Q6NUI2 795 aa11.36□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 SCARF2Q96GP6 870 aaPredicted RBP11.36□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 ZNF395Q9H8N7 513 aaPredicted RBP11.36□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 NR6A1Q15406 480 aa11.35□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 ADAMTS2O95450 1211 aa11.34□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 ADH1AP07327 375 aa11.34□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 FOXK2Q01167 660 aa11.34□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 ADAM32Q8TC27 787 aa11.34□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
GTF2IRD2B-207ENST00000617708 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 ZNF784Q8NCA9 323 aaPredicted RBP11.33□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 SRSF11Q05519 484 aaKnown RBP11.32□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 RAB15P59190 212 aa11.31□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 BAZ1AQ9NRL2 1556 aaPredicted RBP11.31□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms