RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 KRT32Q14532 448 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 PDILTQ8N807 584 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
CUL4A-212ENST00000617546 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
CUL4A-212ENST00000617546 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
CUL4A-212ENST00000617546 SCAND2PQ9GZW5 306 aaPredicted RBP12.16□□□□□ -0.46
CUL4A-212ENST00000617546 XBP1P17861 261 aa12.16□□□□□ -0.46
CUL4A-212ENST00000617546 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
CUL4A-212ENST00000617546 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
CUL4A-212ENST00000617546 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
CUL4A-212ENST00000617546 TIGD1Q96MW7 591 aa12.16□□□□□ -0.46
CUL4A-212ENST00000617546 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
CUL4A-212ENST00000617546 SPATA32Q96LK8 384 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
CUL4A-212ENST00000617546 CUL7Q14999 1698 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
CUL4A-212ENST00000617546 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 A0A0G2JS52 829 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 RALYLQ86SE5 291 aaKnown RBP12.15□□□□□ -0.46
CUL4A-212ENST00000617546 BRMS1Q9HCU9 246 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 THOC2Q8NI27 1593 aaKnown RBP12.15□□□□□ -0.46
CUL4A-212ENST00000617546 C8orf34Q49A92 452 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
CUL4A-212ENST00000617546 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
CUL4A-212ENST00000617546 CCDC171Q6TFL3 1326 aa12.15□□□□□ -0.47
CUL4A-212ENST00000617546 STK38Q15208 465 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 ERICH2A1L162 156 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 GOLGA6L9A6NEM1 432 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 FCHSD2O94868 740 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 DDX19AQ9NUU7 478 aaKnown RBP12.14□□□□□ -0.47
CUL4A-212ENST00000617546 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 SERPINC1P01008 464 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 FEZ1Q99689 392 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 RRP12Q5JTH9 1297 aaKnown RBP12.14□□□□□ -0.47
CUL4A-212ENST00000617546 PPFIBP1Q86W92 1011 aa12.14□□□□□ -0.47
CUL4A-212ENST00000617546 SSFA2P28290 1259 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 MAP9Q49MG5 647 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 ZSCAN23Q3MJ62 389 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 KRT222Q8N1A0 295 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 ZMYM3Q14202 1370 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 IL16Q14005 1332 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 C20orf194Q5TEA3 1177 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 SMC5Q8IY18 1101 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 NSD2O96028 1365 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
CUL4A-212ENST00000617546 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
CUL4A-212ENST00000617546 LUC7LQ9NQ29 371 aaKnown RBP12.13□□□□□ -0.47
CUL4A-212ENST00000617546 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
CUL4A-212ENST00000617546 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
CUL4A-212ENST00000617546 RALGAPBQ86X10 1494 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 EID1Q9Y6B2 187 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 KIF20AO95235 890 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 TNNT1P13805 278 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 NPHP1O15259 732 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 ZNHIT6Q9NWK9 470 aaKnown RBP12.12□□□□□ -0.47
CUL4A-212ENST00000617546 GRIN2BQ13224 1484 aa12.12□□□□□ -0.47
CUL4A-212ENST00000617546 SURF6O75683 361 aaKnown RBP12.11□□□□□ -0.47
CUL4A-212ENST00000617546 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
CUL4A-212ENST00000617546 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
CUL4A-212ENST00000617546 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 TMEM57Q8N5G2 664 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
CUL4A-212ENST00000617546 MARCH6O60337 910 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 SFPQP23246 707 aaKnown RBP eCLIP12.11□□□□□ -0.47
CUL4A-212ENST00000617546 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
CUL4A-212ENST00000617546 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
CUL4A-212ENST00000617546 ERLIN2O94905 339 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 UBE2HP62256 183 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 TUBB4BP68371 445 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 RAB3GAP1Q15042 981 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 TSR2Q969E8 191 aaKnown RBP12.1□□□□□ -0.47
CUL4A-212ENST00000617546 ARHGAP5Q13017 1502 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 SHTN1A0MZ66 631 aa12.1□□□□□ -0.47
CUL4A-212ENST00000617546 NOLC1Q14978 699 aaKnown RBP eCLIP12.1□□□□□ -0.47
CUL4A-212ENST00000617546 MAGEC2Q9UBF1 373 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-212ENST00000617546 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 ADCY5O95622 1261 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 JAKMIP3Q5VZ66 844 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 MICALCLQ6ZW33 695 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 GGNBP2Q9H3C7 697 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 CAMSAP2Q08AD1 1489 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 IVLP07476 585 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 ERICH4A6NGS2 130 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms