RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCDHGC3-203ENST00000616230 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
PCDHGC3-203ENST00000616230 USP35Q9P2H5 1018 aa17.27■□□□□ 0.36
PCDHGC3-203ENST00000616230 CRB1P82279 1406 aa17.27■□□□□ 0.35
PCDHGC3-203ENST00000616230 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
PCDHGC3-203ENST00000616230 THRAP3Q9Y2W1 955 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-203ENST00000616230 TNS1Q9HBL0 1735 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-203ENST00000616230 NME9Q86XW9 330 aa17.25■□□□□ 0.35
PCDHGC3-203ENST00000616230 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
PCDHGC3-203ENST00000616230 SOX12O15370 315 aa17.24■□□□□ 0.35
PCDHGC3-203ENST00000616230 TMF1P82094 1093 aa17.24■□□□□ 0.35
PCDHGC3-203ENST00000616230 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
PCDHGC3-203ENST00000616230 OVOS2A0A0J9YW53 1432 aa17.23■□□□□ 0.35
PCDHGC3-203ENST00000616230 OVOS2Q6IE36 1432 aa17.23■□□□□ 0.35
PCDHGC3-203ENST00000616230 SF3B2Q13435 895 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-203ENST00000616230 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
PCDHGC3-203ENST00000616230 MYOM1P52179 1685 aa17.23■□□□□ 0.35
PCDHGC3-203ENST00000616230 LRRC37A3O60309 1634 aa17.22■□□□□ 0.35
PCDHGC3-203ENST00000616230 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
PCDHGC3-203ENST00000616230 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.35
PCDHGC3-203ENST00000616230 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
PCDHGC3-203ENST00000616230 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
PCDHGC3-203ENST00000616230 TOM1L2Q6ZVM7 507 aa17.19■□□□□ 0.34
PCDHGC3-203ENST00000616230 PDE3BQ13370 1112 aa17.18■□□□□ 0.34
PCDHGC3-203ENST00000616230 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
PCDHGC3-203ENST00000616230 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
PCDHGC3-203ENST00000616230 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
PCDHGC3-203ENST00000616230 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
PCDHGC3-203ENST00000616230 BAG6P46379 1132 aa17.17■□□□□ 0.34
PCDHGC3-203ENST00000616230 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
PCDHGC3-203ENST00000616230 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
PCDHGC3-203ENST00000616230 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
PCDHGC3-203ENST00000616230 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
PCDHGC3-203ENST00000616230 FAM208AQ9UK61 1670 aaKnown RBP17.15■□□□□ 0.34
PCDHGC3-203ENST00000616230 ERBB3P21860 1342 aa17.15■□□□□ 0.34
PCDHGC3-203ENST00000616230 CCDC7Q96M83 1385 aa17.14■□□□□ 0.33
PCDHGC3-203ENST00000616230 TRIM37O94972 964 aa17.13■□□□□ 0.33
PCDHGC3-203ENST00000616230 COG3Q96JB2 828 aa17.13■□□□□ 0.33
PCDHGC3-203ENST00000616230 RREB1Q92766 1687 aa17.13■□□□□ 0.33
PCDHGC3-203ENST00000616230 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
PCDHGC3-203ENST00000616230 DDB1Q16531 1140 aa17.12■□□□□ 0.33
PCDHGC3-203ENST00000616230 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
PCDHGC3-203ENST00000616230 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
PCDHGC3-203ENST00000616230 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
PCDHGC3-203ENST00000616230 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
PCDHGC3-203ENST00000616230 FYB1O15117 783 aa17.1■□□□□ 0.33
PCDHGC3-203ENST00000616230 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
PCDHGC3-203ENST00000616230 IP6K1Q92551 441 aa17.09■□□□□ 0.33
PCDHGC3-203ENST00000616230 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
PCDHGC3-203ENST00000616230 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
PCDHGC3-203ENST00000616230 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
PCDHGC3-203ENST00000616230 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
PCDHGC3-203ENST00000616230 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
PCDHGC3-203ENST00000616230 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.32
PCDHGC3-203ENST00000616230 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 BCL9O00512 1426 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 APBA3O96018 575 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 FBLN1P23142 703 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
PCDHGC3-203ENST00000616230 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
PCDHGC3-203ENST00000616230 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-203ENST00000616230 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
PCDHGC3-203ENST00000616230 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
PCDHGC3-203ENST00000616230 EXOC5O00471 708 aa17.05■□□□□ 0.32
PCDHGC3-203ENST00000616230 HOXC9P31274 260 aa17.05■□□□□ 0.32
PCDHGC3-203ENST00000616230 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
PCDHGC3-203ENST00000616230 IL2RBP14784 551 aa17.03■□□□□ 0.32
PCDHGC3-203ENST00000616230 AMPHP49418 695 aa17.03■□□□□ 0.32
PCDHGC3-203ENST00000616230 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-203ENST00000616230 NHSQ6T4R5 1651 aa17.03■□□□□ 0.32
PCDHGC3-203ENST00000616230 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-203ENST00000616230 MAP2P11137 1827 aaKnown RBP17.01■□□□□ 0.31
PCDHGC3-203ENST00000616230 LRP5O75197 1615 aa17.01■□□□□ 0.31
PCDHGC3-203ENST00000616230 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
PCDHGC3-203ENST00000616230 PSDA5PKW4 1024 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-203ENST00000616230 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
PCDHGC3-203ENST00000616230 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-203ENST00000616230 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
PCDHGC3-203ENST00000616230 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
PCDHGC3-203ENST00000616230 PLSCR1O15162 318 aa16.98■□□□□ 0.31
PCDHGC3-203ENST00000616230 PTF1AQ7RTS3 328 aa16.98■□□□□ 0.31
PCDHGC3-203ENST00000616230 FLT4P35916 1363 aa16.98■□□□□ 0.31
PCDHGC3-203ENST00000616230 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
PCDHGC3-203ENST00000616230 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
PCDHGC3-203ENST00000616230 INSRP06213 1382 aa16.97■□□□□ 0.31
PCDHGC3-203ENST00000616230 BTAF1O14981 1849 aa16.96■□□□□ 0.31
PCDHGC3-203ENST00000616230 MEGF6O75095 1541 aa16.96■□□□□ 0.3
PCDHGC3-203ENST00000616230 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
PCDHGC3-203ENST00000616230 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
PCDHGC3-203ENST00000616230 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
PCDHGC3-203ENST00000616230 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
PCDHGC3-203ENST00000616230 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
PCDHGC3-203ENST00000616230 DOT1LQ8TEK3 1739 aa16.93■□□□□ 0.3
PCDHGC3-203ENST00000616230 KCNQ2O43526 872 aa16.93■□□□□ 0.3
PCDHGC3-203ENST00000616230 PANK3Q9H999 370 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms