RNA–Protein interactions for RNA: ENST00000616084.1

PCIF1-203, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 2

Gene PCIF1, Length 627 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-203ENST00000616084 VPS72Q15906 364 aa16.06■□□□□ 0.16
PCIF1-203ENST00000616084 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
PCIF1-203ENST00000616084 FBLN1P23142 703 aa16.05■□□□□ 0.16
PCIF1-203ENST00000616084 NSD2O96028 1365 aa16.04■□□□□ 0.16
PCIF1-203ENST00000616084 AMPHP49418 695 aa16.04■□□□□ 0.16
PCIF1-203ENST00000616084 GLI3P10071 1580 aa16.04■□□□□ 0.16
PCIF1-203ENST00000616084 ABCC6O95255 1503 aa16.04■□□□□ 0.16
PCIF1-203ENST00000616084 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
PCIF1-203ENST00000616084 RRS1Q15050 365 aaKnown RBP16.03■□□□□ 0.16
PCIF1-203ENST00000616084 MAP3K19Q56UN5 1328 aa16.02■□□□□ 0.16
PCIF1-203ENST00000616084 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
PCIF1-203ENST00000616084 TNNT2P45379 298 aaPredicted RBP16.02■□□□□ 0.16
PCIF1-203ENST00000616084 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
PCIF1-203ENST00000616084 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
PCIF1-203ENST00000616084 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
PCIF1-203ENST00000616084 LARP1Q6PKG0 1096 aaKnown RBP16.01■□□□□ 0.15
PCIF1-203ENST00000616084 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
PCIF1-203ENST00000616084 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
PCIF1-203ENST00000616084 A0A0G2JS52 829 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 PER1O15534 1290 aaPredicted RBP16■□□□□ 0.15
PCIF1-203ENST00000616084 MYT1Q01538 1121 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
PCIF1-203ENST00000616084 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
PCIF1-203ENST00000616084 TOM1L2Q6ZVM7 507 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 IP6K1Q92551 441 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 BRWD3Q6RI45 1802 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
PCIF1-203ENST00000616084 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
PCIF1-203ENST00000616084 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
PCIF1-203ENST00000616084 PEAK1Q9H792 1746 aa15.99■□□□□ 0.15
PCIF1-203ENST00000616084 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
PCIF1-203ENST00000616084 SPATA31A1Q5TZJ5 1347 aa15.98■□□□□ 0.15
PCIF1-203ENST00000616084 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
PCIF1-203ENST00000616084 RGS12O14924 1447 aa15.98■□□□□ 0.15
PCIF1-203ENST00000616084 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
PCIF1-203ENST00000616084 HOXC9P31274 260 aa15.98■□□□□ 0.15
PCIF1-203ENST00000616084 CRB1P82279 1406 aa15.98■□□□□ 0.15
PCIF1-203ENST00000616084 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
PCIF1-203ENST00000616084 RTL1A6NKG5 1358 aa15.98■□□□□ 0.15
PCIF1-203ENST00000616084 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
PCIF1-203ENST00000616084 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
PCIF1-203ENST00000616084 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
PCIF1-203ENST00000616084 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
PCIF1-203ENST00000616084 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.15
PCIF1-203ENST00000616084 FLT4P35916 1363 aa15.96■□□□□ 0.15
PCIF1-203ENST00000616084 ERBB3P21860 1342 aa15.95■□□□□ 0.14
PCIF1-203ENST00000616084 NLRP2Q9NX02 1062 aa15.95■□□□□ 0.14
PCIF1-203ENST00000616084 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
PCIF1-203ENST00000616084 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
PCIF1-203ENST00000616084 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
PCIF1-203ENST00000616084 SEPT12Q8IYM1 358 aa15.94■□□□□ 0.14
PCIF1-203ENST00000616084 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
PCIF1-203ENST00000616084 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
PCIF1-203ENST00000616084 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
PCIF1-203ENST00000616084 INSRP06213 1382 aa15.93■□□□□ 0.14
PCIF1-203ENST00000616084 HSP90AB2PQ58FF8 381 aa15.93■□□□□ 0.14
PCIF1-203ENST00000616084 CARD10Q9BWT7 1032 aa15.93■□□□□ 0.14
PCIF1-203ENST00000616084 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
PCIF1-203ENST00000616084 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
PCIF1-203ENST00000616084 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
PCIF1-203ENST00000616084 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
PCIF1-203ENST00000616084 PARP4Q9UKK3 1724 aaKnown RBP15.9■□□□□ 0.14
PCIF1-203ENST00000616084 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
PCIF1-203ENST00000616084 MTHFSP49914 203 aa15.87■□□□□ 0.13
PCIF1-203ENST00000616084 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
PCIF1-203ENST00000616084 LRRC37A3O60309 1634 aa15.86■□□□□ 0.13
PCIF1-203ENST00000616084 PDE3BQ13370 1112 aa15.86■□□□□ 0.13
PCIF1-203ENST00000616084 USHBP1Q8N6Y0 703 aa15.86■□□□□ 0.13
PCIF1-203ENST00000616084 SOCS7O14512 581 aa15.85■□□□□ 0.13
PCIF1-203ENST00000616084 IL2RBP14784 551 aa15.85■□□□□ 0.13
PCIF1-203ENST00000616084 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
PCIF1-203ENST00000616084 DDB1Q16531 1140 aa15.85■□□□□ 0.13
PCIF1-203ENST00000616084 NBPF6Q5VWK0 638 aa15.85■□□□□ 0.13
PCIF1-203ENST00000616084 NBPF4Q96M43 638 aa15.85■□□□□ 0.13
PCIF1-203ENST00000616084 DISP2A7MBM2 1401 aa15.84■□□□□ 0.13
PCIF1-203ENST00000616084 EXOC5O00471 708 aa15.82■□□□□ 0.12
PCIF1-203ENST00000616084 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
PCIF1-203ENST00000616084 FAM182BQ5T319 152 aa15.82■□□□□ 0.12
PCIF1-203ENST00000616084 RAPGEF4Q8WZA2 1011 aa15.82■□□□□ 0.12
PCIF1-203ENST00000616084 EYA1Q99502 592 aa15.82■□□□□ 0.12
PCIF1-203ENST00000616084 PARD3Q8TEW0 1356 aa15.81■□□□□ 0.12
PCIF1-203ENST00000616084 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
PCIF1-203ENST00000616084 TNS2Q63HR2 1409 aa15.8■□□□□ 0.12
PCIF1-203ENST00000616084 TATP17735 454 aaPredicted RBP15.8■□□□□ 0.12
PCIF1-203ENST00000616084 SBF2Q86WG5 1849 aa15.8■□□□□ 0.12
PCIF1-203ENST00000616084 MEGF6O75095 1541 aa15.79■□□□□ 0.12
PCIF1-203ENST00000616084 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
PCIF1-203ENST00000616084 RALBP1Q15311 655 aa15.79■□□□□ 0.12
PCIF1-203ENST00000616084 RGPD1P0DJD0 1748 aa15.78■□□□□ 0.12
PCIF1-203ENST00000616084 SHANK3Q9BYB0 1731 aa15.78■□□□□ 0.12
PCIF1-203ENST00000616084 IL13P35225 146 aa15.78■□□□□ 0.12
PCIF1-203ENST00000616084 UPF1Q92900 1129 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCIF1-203ENST00000616084 IGSF1Q8N6C5 1336 aa15.77■□□□□ 0.12
PCIF1-203ENST00000616084 FAM196AQ6ZSG2 479 aa15.77■□□□□ 0.12
PCIF1-203ENST00000616084 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
PCIF1-203ENST00000616084 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
PCIF1-203ENST00000616084 MARCH10Q8NA82 808 aaPredicted RBP15.76■□□□□ 0.11
PCIF1-203ENST00000616084 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms