RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 STK3Q13188 491 aa15.81■□□□□ 0.12
NLRC3-204ENST00000615877 MPHOSPH10O00566 681 aaKnown RBP15.8■□□□□ 0.12
NLRC3-204ENST00000615877 MAGEC2Q9UBF1 373 aaPredicted RBP15.8■□□□□ 0.12
NLRC3-204ENST00000615877 CCDC30Q5VVM6 783 aa15.8■□□□□ 0.12
NLRC3-204ENST00000615877 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 CIZ1Q9ULV3 898 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 PPM1FP49593 454 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
NLRC3-204ENST00000615877 CT47B1P0C2W7 299 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 PAXIP1Q6ZW49 1069 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-204ENST00000615877 PDCL3Q9H2J4 239 aa15.78■□□□□ 0.12
NLRC3-204ENST00000615877 ZNF644Q9H582 1327 aaPredicted RBP15.78■□□□□ 0.12
NLRC3-204ENST00000615877 ANKRD62A6NC57 917 aa15.78■□□□□ 0.12
NLRC3-204ENST00000615877 GNAI2P04899 355 aa15.78■□□□□ 0.12
NLRC3-204ENST00000615877 TXNDC2Q86VQ3 553 aa15.78■□□□□ 0.12
NLRC3-204ENST00000615877 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
NLRC3-204ENST00000615877 TSR2Q969E8 191 aaKnown RBP15.78■□□□□ 0.12
NLRC3-204ENST00000615877 PIP4K2AP48426 406 aaPredicted RBP15.77■□□□□ 0.12
NLRC3-204ENST00000615877 PLEKHO1Q53GL0 409 aaPredicted RBP15.77■□□□□ 0.12
NLRC3-204ENST00000615877 CCDC158Q5M9N0 1113 aa15.77■□□□□ 0.12
NLRC3-204ENST00000615877 TATP17735 454 aaPredicted RBP15.77■□□□□ 0.11
NLRC3-204ENST00000615877 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.11
NLRC3-204ENST00000615877 KRT85P78386 507 aa15.77■□□□□ 0.11
NLRC3-204ENST00000615877 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
NLRC3-204ENST00000615877 ERLIN1O75477 346 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 KIAA0754O94854 1291 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 NEFHP12036 1026 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
NLRC3-204ENST00000615877 CHD1LQ86WJ1 897 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 ERC1Q8IUD2 1116 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 ANKRD1Q15327 319 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
NLRC3-204ENST00000615877 PRKAR2BP31323 418 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 PPFIBP1Q86W92 1011 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
NLRC3-204ENST00000615877 CCDC85AQ96PX6 553 aaPredicted RBP15.76■□□□□ 0.11
NLRC3-204ENST00000615877 ZSCAN30Q86W11 494 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 TANGO6Q9C0B7 1094 aa15.76■□□□□ 0.11
NLRC3-204ENST00000615877 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 SEPT11Q9NVA2 429 aaKnown RBP15.75■□□□□ 0.11
NLRC3-204ENST00000615877 CCDC97Q96F63 343 aaPredicted RBP15.75■□□□□ 0.11
NLRC3-204ENST00000615877 DACH1Q9UI36 760 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 NCOA2Q15596 1464 aa15.75■□□□□ 0.11
NLRC3-204ENST00000615877 CBFA2T2O43439 604 aa15.74■□□□□ 0.11
NLRC3-204ENST00000615877 TXLNAP40222 546 aa15.74■□□□□ 0.11
NLRC3-204ENST00000615877 LRRCC1Q9C099 1032 aa15.74■□□□□ 0.11
NLRC3-204ENST00000615877 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
NLRC3-204ENST00000615877 GOLGA6L10A6NI86 522 aa15.74■□□□□ 0.11
NLRC3-204ENST00000615877 ME1P48163 572 aa15.74■□□□□ 0.11
NLRC3-204ENST00000615877 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
NLRC3-204ENST00000615877 FAM177A1Q8N128 213 aaPredicted RBP15.74■□□□□ 0.11
NLRC3-204ENST00000615877 LARP1BQ659C4 914 aaKnown RBP15.73■□□□□ 0.11
NLRC3-204ENST00000615877 PLCD4Q9BRC7 762 aa15.73■□□□□ 0.11
NLRC3-204ENST00000615877 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.11
NLRC3-204ENST00000615877 CCDC69A6NI79 296 aa15.73■□□□□ 0.11
NLRC3-204ENST00000615877 ERICH4A6NGS2 130 aa15.73■□□□□ 0.11
NLRC3-204ENST00000615877 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
NLRC3-204ENST00000615877 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
NLRC3-204ENST00000615877 WDR63Q8IWG1 891 aa15.73■□□□□ 0.11
NLRC3-204ENST00000615877 NUP62CLQ9H1M0 184 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 ERLIN2O94905 339 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 SPATA32Q96LK8 384 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 CCDC181Q5TID7 509 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 SSBP05455 408 aaKnown RBP eCLIP15.72■□□□□ 0.11
NLRC3-204ENST00000615877 USP5P45974 858 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 PODXL2Q9NZ53 605 aa15.72■□□□□ 0.11
NLRC3-204ENST00000615877 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
NLRC3-204ENST00000615877 SYCE3A1L190 88 aa15.71■□□□□ 0.11
NLRC3-204ENST00000615877 CCT4P50991 539 aaKnown RBP15.71■□□□□ 0.11
NLRC3-204ENST00000615877 TAF3Q5VWG9 929 aa15.71■□□□□ 0.11
NLRC3-204ENST00000615877 NEBLO76041 1014 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 ZNF76P36508 570 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.7■□□□□ 0.1
NLRC3-204ENST00000615877 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 PRAM1Q96QH2 718 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 CCDC184Q52MB2 194 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 PDRG1Q9NUG6 133 aa15.7■□□□□ 0.1
NLRC3-204ENST00000615877 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 SOGA3Q5TF21 947 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 CEP57L1Q8IYX8 460 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 FAM193AP78312 1265 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 ZSCAN31Q96LW9 406 aaPredicted RBP15.69■□□□□ 0.1
NLRC3-204ENST00000615877 DEF6Q9H4E7 631 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 IGF1RP08069 1367 aa15.69■□□□□ 0.1
NLRC3-204ENST00000615877 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
NLRC3-204ENST00000615877 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
NLRC3-204ENST00000615877 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
NLRC3-204ENST00000615877 RAI14Q9P0K7 980 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms