RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
VPS11-206ENST00000614944 RGPD1P0DJD0 1748 aa11.45□□□□□ -0.58
VPS11-206ENST00000614944 PROSER2Q86WR7 435 aaPredicted RBP11.45□□□□□ -0.58
VPS11-206ENST00000614944 TEX2Q8IWB9 1127 aa11.44□□□□□ -0.58
VPS11-206ENST00000614944 MSH6P52701 1360 aa11.44□□□□□ -0.58
VPS11-206ENST00000614944 SBNO1A3KN83 1393 aa11.44□□□□□ -0.58
VPS11-206ENST00000614944 ZBED9Q6R2W3 1325 aa11.44□□□□□ -0.58
VPS11-206ENST00000614944 HSPA2P54652 639 aa11.44□□□□□ -0.58
VPS11-206ENST00000614944 CDK11BP21127 795 aaKnown RBP11.43□□□□□ -0.58
VPS11-206ENST00000614944 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
VPS11-206ENST00000614944 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
VPS11-206ENST00000614944 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
VPS11-206ENST00000614944 PHF8Q9UPP1 1060 aa11.42□□□□□ -0.58
VPS11-206ENST00000614944 NFAT5O94916 1531 aa11.42□□□□□ -0.58
VPS11-206ENST00000614944 SENP3Q9H4L4 574 aaPredicted RBP11.42□□□□□ -0.58
VPS11-206ENST00000614944 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
VPS11-206ENST00000614944 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
VPS11-206ENST00000614944 PXDNQ92626 1479 aa11.41□□□□□ -0.58
VPS11-206ENST00000614944 SECISBP2LQ93073 1101 aaKnown RBP11.41□□□□□ -0.58
VPS11-206ENST00000614944 PEAK1Q9H792 1746 aa11.41□□□□□ -0.58
VPS11-206ENST00000614944 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
VPS11-206ENST00000614944 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
VPS11-206ENST00000614944 COG3Q96JB2 828 aa11.4□□□□□ -0.58
VPS11-206ENST00000614944 IPO9Q96P70 1041 aaKnown RBP11.4□□□□□ -0.58
VPS11-206ENST00000614944 AHDC1Q5TGY3 1603 aaPredicted RBP11.39□□□□□ -0.59
VPS11-206ENST00000614944 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
VPS11-206ENST00000614944 LTN1O94822 1766 aa11.39□□□□□ -0.59
VPS11-206ENST00000614944 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
VPS11-206ENST00000614944 USP19O94966 1318 aa11.39□□□□□ -0.59
VPS11-206ENST00000614944 PLEKHG2Q9H7P9 1386 aa11.38□□□□□ -0.59
VPS11-206ENST00000614944 ANP32AP39687 249 aaKnown RBP11.38□□□□□ -0.59
VPS11-206ENST00000614944 GSE1Q14687 1217 aa11.38□□□□□ -0.59
VPS11-206ENST00000614944 FAM208AQ9UK61 1670 aaKnown RBP11.38□□□□□ -0.59
VPS11-206ENST00000614944 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
VPS11-206ENST00000614944 ATF3P18847 181 aa11.38□□□□□ -0.59
VPS11-206ENST00000614944 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
VPS11-206ENST00000614944 COL22A1Q8NFW1 1626 aaPredicted RBP11.38□□□□□ -0.59
VPS11-206ENST00000614944 NGDNQ8NEJ9 315 aaKnown RBP11.37□□□□□ -0.59
VPS11-206ENST00000614944 GGNBP2Q9H3C7 697 aa11.37□□□□□ -0.59
VPS11-206ENST00000614944 ABCA3Q99758 1704 aa11.37□□□□□ -0.59
VPS11-206ENST00000614944 PDE3BQ13370 1112 aa11.37□□□□□ -0.59
VPS11-206ENST00000614944 NME9Q86XW9 330 aa11.36□□□□□ -0.59
VPS11-206ENST00000614944 MTHFSP49914 203 aa11.36□□□□□ -0.59
VPS11-206ENST00000614944 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
VPS11-206ENST00000614944 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
VPS11-206ENST00000614944 PSME1Q06323 249 aa11.36□□□□□ -0.59
VPS11-206ENST00000614944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS11-206ENST00000614944 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
VPS11-206ENST00000614944 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
VPS11-206ENST00000614944 WDR43Q15061 677 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS11-206ENST00000614944 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
VPS11-206ENST00000614944 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
VPS11-206ENST00000614944 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
VPS11-206ENST00000614944 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 NUDCQ9Y266 331 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 COL18A1P39060 1754 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 FLT4P35916 1363 aa11.34□□□□□ -0.59
VPS11-206ENST00000614944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS11-206ENST00000614944 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
VPS11-206ENST00000614944 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
VPS11-206ENST00000614944 PMFBP1Q8TBY8 1022 aa11.33□□□□□ -0.6
VPS11-206ENST00000614944 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
VPS11-206ENST00000614944 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
VPS11-206ENST00000614944 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
VPS11-206ENST00000614944 PDCL3Q9H2J4 239 aa11.32□□□□□ -0.6
VPS11-206ENST00000614944 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS11-206ENST00000614944 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
VPS11-206ENST00000614944 DIAPH1O60610 1272 aaKnown RBP11.31□□□□□ -0.6
VPS11-206ENST00000614944 IL13P35225 146 aa11.31□□□□□ -0.6
VPS11-206ENST00000614944 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
VPS11-206ENST00000614944 CPDO75976 1380 aa11.31□□□□□ -0.6
VPS11-206ENST00000614944 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
VPS11-206ENST00000614944 FCHSD2O94868 740 aa11.3□□□□□ -0.6
VPS11-206ENST00000614944 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
VPS11-206ENST00000614944 KDRP35968 1356 aa11.3□□□□□ -0.6
VPS11-206ENST00000614944 KRT28Q7Z3Y7 464 aa11.3□□□□□ -0.6
VPS11-206ENST00000614944 CNPY4Q8N129 248 aa11.3□□□□□ -0.6
VPS11-206ENST00000614944 PLEKHF1Q96S99 279 aa11.3□□□□□ -0.6
VPS11-206ENST00000614944 BRINP3Q76B58 766 aa11.29□□□□□ -0.6
VPS11-206ENST00000614944 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
VPS11-206ENST00000614944 SPATA31A3Q5VYP0 1347 aa11.29□□□□□ -0.6
VPS11-206ENST00000614944 ZRANB1Q9UGI0 708 aa11.28□□□□□ -0.6
VPS11-206ENST00000614944 ABTB2Q8N961 1025 aa11.28□□□□□ -0.6
VPS11-206ENST00000614944 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
VPS11-206ENST00000614944 NUTM2FA1L443 756 aa11.27□□□□□ -0.6
VPS11-206ENST00000614944 MAP3K19Q56UN5 1328 aa11.27□□□□□ -0.6
VPS11-206ENST00000614944 NLRP6P59044 892 aa11.27□□□□□ -0.61
VPS11-206ENST00000614944 ZNF830Q96NB3 372 aaPredicted RBP11.27□□□□□ -0.61
VPS11-206ENST00000614944 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.61
VPS11-206ENST00000614944 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
VPS11-206ENST00000614944 LRRC37A3O60309 1634 aa11.26□□□□□ -0.61
VPS11-206ENST00000614944 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
VPS11-206ENST00000614944 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
VPS11-206ENST00000614944 IP6K1Q92551 441 aa11.26□□□□□ -0.61
VPS11-206ENST00000614944 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
VPS11-206ENST00000614944 IL16Q14005 1332 aa11.25□□□□□ -0.61
VPS11-206ENST00000614944 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms