RNA–Protein interactions for RNA: ENST00000614675.4

SNCB-206, Transcript of synuclein beta, humanhuman

TSL 1 (best) BASIC

Gene SNCB, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-206ENST00000614675 EVA1CP58658 441 aa30.33■■■□□ 2.45
SNCB-206ENST00000614675 RGPD5Q99666 1765 aa30.32■■■□□ 2.44
SNCB-206ENST00000614675 CDK12Q9NYV4 1490 aaPredicted RBP30.32■■■□□ 2.44
SNCB-206ENST00000614675 COL5A2P05997 1499 aaPredicted RBP30.31■■■□□ 2.44
SNCB-206ENST00000614675 RGS12O14924 1447 aa30.3■■■□□ 2.44
SNCB-206ENST00000614675 SPATA31A5Q5VU36 1347 aa30.29■■■□□ 2.44
SNCB-206ENST00000614675 SPATA31A7Q8IWB4 1347 aa30.29■■■□□ 2.44
SNCB-206ENST00000614675 LARP1Q6PKG0 1096 aaKnown RBP30.29■■■□□ 2.44
SNCB-206ENST00000614675 KNSTRNQ9Y448 316 aa30.29■■■□□ 2.44
SNCB-206ENST00000614675 ABCC6O95255 1503 aa30.27■■■□□ 2.44
SNCB-206ENST00000614675 MAP3K19Q56UN5 1328 aa30.26■■■□□ 2.44
SNCB-206ENST00000614675 ANKRD26Q9UPS8 1709 aa30.26■■■□□ 2.43
SNCB-206ENST00000614675 RRS1Q15050 365 aaKnown RBP30.25■■■□□ 2.43
SNCB-206ENST00000614675 SPATA31A1Q5TZJ5 1347 aa30.25■■■□□ 2.43
SNCB-206ENST00000614675 PER1O15534 1290 aaPredicted RBP30.23■■■□□ 2.43
SNCB-206ENST00000614675 NSD2O96028 1365 aa30.22■■■□□ 2.43
SNCB-206ENST00000614675 USP35Q9P2H5 1018 aa30.22■■■□□ 2.43
SNCB-206ENST00000614675 FAM98CQ17RN3 349 aaKnown RBP30.22■■■□□ 2.43
SNCB-206ENST00000614675 IP6K1Q92551 441 aa30.22■■■□□ 2.43
SNCB-206ENST00000614675 WDR17Q8IZU2 1322 aa30.21■■■□□ 2.43
SNCB-206ENST00000614675 AMPHP49418 695 aa30.21■■■□□ 2.43
SNCB-206ENST00000614675 AMER1Q5JTC6 1135 aaPredicted RBP30.21■■■□□ 2.43
SNCB-206ENST00000614675 ONECUT3O60422 494 aaPredicted RBP30.2■■■□□ 2.42
SNCB-206ENST00000614675 CSB-PGBD3P0DP91 1061 aa30.2■■■□□ 2.42
SNCB-206ENST00000614675 CRB1P82279 1406 aa30.2■■■□□ 2.42
SNCB-206ENST00000614675 HOXC9P31274 260 aa30.19■■■□□ 2.42
SNCB-206ENST00000614675 TOM1L2Q6ZVM7 507 aa30.19■■■□□ 2.42
SNCB-206ENST00000614675 TNNT2P45379 298 aaPredicted RBP30.18■■■□□ 2.42
SNCB-206ENST00000614675 SEPT12Q8IYM1 358 aa30.18■■■□□ 2.42
SNCB-206ENST00000614675 BLMP54132 1417 aaPredicted RBP30.17■■■□□ 2.42
SNCB-206ENST00000614675 ERBB3P21860 1342 aa30.17■■■□□ 2.42
SNCB-206ENST00000614675 MAP2P11137 1827 aaKnown RBP30.17■■■□□ 2.42
SNCB-206ENST00000614675 A0A0G2JS52 829 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 SOCS7O14512 581 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 MYT1Q01538 1121 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 TCP11L2Q8N4U5 519 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 ANKRD24Q8TF21 1146 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 EMILIN1Q9Y6C2 1016 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 RTL1A6NKG5 1358 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 PEAK1Q9H792 1746 aa30.15■■■□□ 2.42
SNCB-206ENST00000614675 MORC1Q86VD1 984 aa30.14■■■□□ 2.42
SNCB-206ENST00000614675 BRWD3Q6RI45 1802 aa30.14■■■□□ 2.42
SNCB-206ENST00000614675 LTV1Q96GA3 475 aaPredicted RBP30.13■■■□□ 2.41
SNCB-206ENST00000614675 CC2D1BQ5T0F9 858 aaKnown RBP30.12■■■□□ 2.41
SNCB-206ENST00000614675 BARGINQ6ZT62 677 aa30.12■■■□□ 2.41
SNCB-206ENST00000614675 THRAP3Q9Y2W1 955 aaKnown RBP30.12■■■□□ 2.41
SNCB-206ENST00000614675 THSD7AQ9UPZ6 1657 aa30.11■■■□□ 2.41
SNCB-206ENST00000614675 FLT4P35916 1363 aa30.11■■■□□ 2.41
SNCB-206ENST00000614675 PPM1GO15355 546 aaPredicted RBP30.11■■■□□ 2.41
SNCB-206ENST00000614675 CARD10Q9BWT7 1032 aa30.11■■■□□ 2.41
SNCB-206ENST00000614675 POLKQ9UBT6 870 aa30.11■■■□□ 2.41
SNCB-206ENST00000614675 KIF24Q5T7B8 1368 aa30.1■■■□□ 2.41
SNCB-206ENST00000614675 HSP90AB2PQ58FF8 381 aa30.1■■■□□ 2.41
SNCB-206ENST00000614675 NLRP2Q9NX02 1062 aa30.1■■■□□ 2.41
SNCB-206ENST00000614675 CNGB1Q14028 1251 aaPredicted RBP30.08■■■□□ 2.41
SNCB-206ENST00000614675 INSRP06213 1382 aa30.07■■■□□ 2.4
SNCB-206ENST00000614675 NPC1L1Q9UHC9 1359 aa30.07■■■□□ 2.4
SNCB-206ENST00000614675 FAM208AQ9UK61 1670 aaKnown RBP30.04■■■□□ 2.4
SNCB-206ENST00000614675 RGPD2P0DJD1 1756 aa30.04■■■□□ 2.4
SNCB-206ENST00000614675 KRT27Q7Z3Y8 459 aa30.04■■■□□ 2.4
SNCB-206ENST00000614675 WNK3Q9BYP7 1800 aa30.03■■■□□ 2.4
SNCB-206ENST00000614675 SMG6Q86US8 1419 aaKnown RBP30■■■□□ 2.39
SNCB-206ENST00000614675 DDX10Q13206 875 aaKnown RBP30■■■□□ 2.39
SNCB-206ENST00000614675 PARP4Q9UKK3 1724 aaKnown RBP30■■■□□ 2.39
SNCB-206ENST00000614675 EP400Q96L91 3159 aa29.99■■■□□ 2.39
SNCB-206ENST00000614675 DISP2A7MBM2 1401 aa29.98■■■□□ 2.39
SNCB-206ENST00000614675 NBPF6Q5VWK0 638 aa29.97■■■□□ 2.39
SNCB-206ENST00000614675 NBPF4Q96M43 638 aa29.97■■■□□ 2.39
SNCB-206ENST00000614675 CDCA7Q9BWT1 371 aaPredicted RBP29.97■■■□□ 2.39
SNCB-206ENST00000614675 FAM182BQ5T319 152 aa29.96■■■□□ 2.39
SNCB-206ENST00000614675 LRRC37A3O60309 1634 aa29.95■■■□□ 2.38
SNCB-206ENST00000614675 PDE3BQ13370 1112 aa29.94■■■□□ 2.38
SNCB-206ENST00000614675 DDB1Q16531 1140 aa29.94■■■□□ 2.38
SNCB-206ENST00000614675 USHBP1Q8N6Y0 703 aa29.94■■■□□ 2.38
SNCB-206ENST00000614675 UPF1Q92900 1129 aaKnown RBP eCLIP29.94■■■□□ 2.38
SNCB-206ENST00000614675 IL2RBP14784 551 aa29.93■■■□□ 2.38
SNCB-206ENST00000614675 MTHFSP49914 203 aa29.92■■■□□ 2.38
SNCB-206ENST00000614675 EIF4A2Q14240 407 aaKnown RBP29.91■■■□□ 2.38
SNCB-206ENST00000614675 ZNF316A6NFI3 1004 aaPredicted RBP29.88■■■□□ 2.37
SNCB-206ENST00000614675 EXOC5O00471 708 aa29.88■■■□□ 2.37
SNCB-206ENST00000614675 EYA1Q99502 592 aa29.88■■■□□ 2.37
SNCB-206ENST00000614675 TNS2Q63HR2 1409 aa29.85■■■□□ 2.37
SNCB-206ENST00000614675 MEGF6O75095 1541 aa29.85■■■□□ 2.37
SNCB-206ENST00000614675 MARCH10Q8NA82 808 aaPredicted RBP29.83■■■□□ 2.37
SNCB-206ENST00000614675 NCAPD2Q15021 1401 aa29.83■■■□□ 2.37
SNCB-206ENST00000614675 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
SNCB-206ENST00000614675 RAPGEF4Q8WZA2 1011 aa29.82■■■□□ 2.36
SNCB-206ENST00000614675 PPP2R1AP30153 589 aa29.8■■■□□ 2.36
SNCB-206ENST00000614675 IL13P35225 146 aa29.79■■■□□ 2.36
SNCB-206ENST00000614675 PARD3Q8TEW0 1356 aa29.79■■■□□ 2.36
SNCB-206ENST00000614675 IGSF1Q8N6C5 1336 aa29.79■■■□□ 2.36
SNCB-206ENST00000614675 OVOS2A0A0G2JMS6 1433 aa29.79■■■□□ 2.36
SNCB-206ENST00000614675 TATP17735 454 aaPredicted RBP29.79■■■□□ 2.36
SNCB-206ENST00000614675 CCDC125Q86Z20 511 aa29.76■■■□□ 2.35
SNCB-206ENST00000614675 ZCRB1Q8TBF4 217 aaKnown RBP29.76■■■□□ 2.35
SNCB-206ENST00000614675 RGPD1P0DJD0 1748 aa29.75■■■□□ 2.35
SNCB-206ENST00000614675 COL3A1P02461 1466 aaPredicted RBP29.75■■■□□ 2.35
SNCB-206ENST00000614675 DIAPH1O60610 1272 aaKnown RBP29.74■■■□□ 2.35
SNCB-206ENST00000614675 DDX54Q8TDD1 881 aaKnown RBP29.74■■■□□ 2.35
SNCB-206ENST00000614675 SHANK3Q9BYB0 1731 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms