RNA–Protein interactions for RNA: ENST00000614404.1

UBB-209, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBB, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-209ENST00000614404 POGKQ9P215 609 aa13.01□□□□□ -0.33
UBB-209ENST00000614404 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
UBB-209ENST00000614404 MRE11P49959 708 aa13□□□□□ -0.33
UBB-209ENST00000614404 STK26Q9P289 416 aa13□□□□□ -0.33
UBB-209ENST00000614404 DIP2AQ14689 1571 aa12.99□□□□□ -0.33
UBB-209ENST00000614404 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
UBB-209ENST00000614404 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
UBB-209ENST00000614404 PTPRUQ92729 1446 aa12.98□□□□□ -0.33
UBB-209ENST00000614404 SKOR2Q2VWA4 1001 aaPredicted RBP12.98□□□□□ -0.33
UBB-209ENST00000614404 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
UBB-209ENST00000614404 RGS17Q9UGC6 210 aaPredicted RBP12.98□□□□□ -0.33
UBB-209ENST00000614404 PNPLA6Q8IY17 1366 aa12.97□□□□□ -0.33
UBB-209ENST00000614404 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
UBB-209ENST00000614404 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.97□□□□□ -0.33
UBB-209ENST00000614404 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
UBB-209ENST00000614404 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
UBB-209ENST00000614404 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBB-209ENST00000614404 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
UBB-209ENST00000614404 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
UBB-209ENST00000614404 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
UBB-209ENST00000614404 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
UBB-209ENST00000614404 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
UBB-209ENST00000614404 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
UBB-209ENST00000614404 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
UBB-209ENST00000614404 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
UBB-209ENST00000614404 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.33
UBB-209ENST00000614404 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
UBB-209ENST00000614404 ATP7BP35670 1465 aa12.96□□□□□ -0.34
UBB-209ENST00000614404 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.34
UBB-209ENST00000614404 PTCH1Q13635 1447 aa12.96□□□□□ -0.34
UBB-209ENST00000614404 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 ROBO2Q9HCK4 1378 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 TRIM27P14373 513 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 DDIT3P35638 169 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 PIP4K2BP78356 416 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 NUCB1Q02818 461 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
UBB-209ENST00000614404 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 CDK19Q9BWU1 502 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 TERF2IPQ9NYB0 399 aa12.95□□□□□ -0.34
UBB-209ENST00000614404 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
UBB-209ENST00000614404 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
UBB-209ENST00000614404 TRAK2O60296 914 aa12.94□□□□□ -0.34
UBB-209ENST00000614404 CLCN1P35523 988 aa12.94□□□□□ -0.34
UBB-209ENST00000614404 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
UBB-209ENST00000614404 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
UBB-209ENST00000614404 BMP2KLQ5H9B9 411 aa12.94□□□□□ -0.34
UBB-209ENST00000614404 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
UBB-209ENST00000614404 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
UBB-209ENST00000614404 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
UBB-209ENST00000614404 TOPAZ1Q8N9V7 1692 aa12.93□□□□□ -0.34
UBB-209ENST00000614404 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
UBB-209ENST00000614404 AKAP12Q02952 1782 aa12.93□□□□□ -0.34
UBB-209ENST00000614404 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
UBB-209ENST00000614404 TOM1O60784 492 aa12.92□□□□□ -0.34
UBB-209ENST00000614404 EXOSC9Q06265 439 aaKnown RBP12.92□□□□□ -0.34
UBB-209ENST00000614404 MON2Q7Z3U7 1717 aa12.92□□□□□ -0.34
UBB-209ENST00000614404 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
UBB-209ENST00000614404 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
UBB-209ENST00000614404 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
UBB-209ENST00000614404 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
UBB-209ENST00000614404 FCHSD2O94868 740 aa12.91□□□□□ -0.34
UBB-209ENST00000614404 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBB-209ENST00000614404 MFAP1P55081 439 aaKnown RBP12.91□□□□□ -0.34
UBB-209ENST00000614404 CLEC17AQ6ZS10 378 aa12.91□□□□□ -0.34
UBB-209ENST00000614404 EID1Q9Y6B2 187 aa12.91□□□□□ -0.34
UBB-209ENST00000614404 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
UBB-209ENST00000614404 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
UBB-209ENST00000614404 TNNQ9UQP3 1299 aa12.9□□□□□ -0.34
UBB-209ENST00000614404 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
UBB-209ENST00000614404 FYB1O15117 783 aa12.89□□□□□ -0.35
UBB-209ENST00000614404 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
UBB-209ENST00000614404 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
UBB-209ENST00000614404 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
UBB-209ENST00000614404 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
UBB-209ENST00000614404 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
UBB-209ENST00000614404 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
UBB-209ENST00000614404 TMEM57Q8N5G2 664 aa12.88□□□□□ -0.35
UBB-209ENST00000614404 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
UBB-209ENST00000614404 RRAGDQ9NQL2 400 aaPredicted RBP12.88□□□□□ -0.35
UBB-209ENST00000614404 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
UBB-209ENST00000614404 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
UBB-209ENST00000614404 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
UBB-209ENST00000614404 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
UBB-209ENST00000614404 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
UBB-209ENST00000614404 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
UBB-209ENST00000614404 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
UBB-209ENST00000614404 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
UBB-209ENST00000614404 HAP1P54257 671 aaPredicted RBP12.86□□□□□ -0.35
UBB-209ENST00000614404 GLIPR1L2Q4G1C9 344 aa12.86□□□□□ -0.35
UBB-209ENST00000614404 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
UBB-209ENST00000614404 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
UBB-209ENST00000614404 SLC26A8Q96RN1 970 aa12.86□□□□□ -0.35
UBB-209ENST00000614404 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
UBB-209ENST00000614404 EDC4Q6P2E9 1401 aaKnown RBP12.86□□□□□ -0.35
UBB-209ENST00000614404 ITSN1Q15811 1721 aa12.85□□□□□ -0.35
UBB-209ENST00000614404 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
UBB-209ENST00000614404 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms