RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 GOLGA8CPA6NN73 597 aa12.1□□□□□ -0.47
CCL3-205ENST00000613928 GCGRP47871 477 aa12.1□□□□□ -0.47
CCL3-205ENST00000613928 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
CCL3-205ENST00000613928 LRCH3Q96II8 777 aa12.1□□□□□ -0.47
CCL3-205ENST00000613928 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
CCL3-205ENST00000613928 DISP3Q9P2K9 1392 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 RNF40O75150 1001 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 SLC10A3P09131 477 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 USP46P62068 366 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 MLECQ14165 292 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 ILDR2Q71H61 639 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
CCL3-205ENST00000613928 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
CCL3-205ENST00000613928 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
CCL3-205ENST00000613928 KDM4AO75164 1064 aa12.08□□□□□ -0.48
CCL3-205ENST00000613928 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
CCL3-205ENST00000613928 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
CCL3-205ENST00000613928 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
CCL3-205ENST00000613928 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.08□□□□□ -0.48
CCL3-205ENST00000613928 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
CCL3-205ENST00000613928 KDM5DQ9BY66 1539 aa12.07□□□□□ -0.48
CCL3-205ENST00000613928 PREX1Q8TCU6 1659 aa12.07□□□□□ -0.48
CCL3-205ENST00000613928 KRTAP3-3Q9BYR6 98 aa12.07□□□□□ -0.48
CCL3-205ENST00000613928 KRTAP3-2Q9BYR7 98 aa12.07□□□□□ -0.48
CCL3-205ENST00000613928 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
CCL3-205ENST00000613928 GJA5P36382 358 aa12.06□□□□□ -0.48
CCL3-205ENST00000613928 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
CCL3-205ENST00000613928 AFAP1Q8N556 730 aa12.05□□□□□ -0.48
CCL3-205ENST00000613928 NUP155O75694 1391 aa12.05□□□□□ -0.48
CCL3-205ENST00000613928 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 SCAPERQ9BY12 1400 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 CFHP08603 1231 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCL3-205ENST00000613928 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 SPATA31D1Q6ZQQ2 1576 aa12.04□□□□□ -0.48
CCL3-205ENST00000613928 STRCQ7RTU9 1775 aa12.03□□□□□ -0.48
CCL3-205ENST00000613928 SOCS7O14512 581 aa12.03□□□□□ -0.48
CCL3-205ENST00000613928 SPTLC1O15269 473 aa12.03□□□□□ -0.48
CCL3-205ENST00000613928 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
CCL3-205ENST00000613928 RSBN1LQ6PCB5 846 aaPredicted RBP12.03□□□□□ -0.48
CCL3-205ENST00000613928 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
CCL3-205ENST00000613928 UNC13BO14795 1591 aa12.03□□□□□ -0.48
CCL3-205ENST00000613928 SPAG9O60271 1321 aaKnown RBP12.03□□□□□ -0.48
CCL3-205ENST00000613928 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
CCL3-205ENST00000613928 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
CCL3-205ENST00000613928 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
CCL3-205ENST00000613928 DIEXFQ68CQ4 756 aaKnown RBP12.02□□□□□ -0.49
CCL3-205ENST00000613928 C14orf37Q86TY3 774 aa12.02□□□□□ -0.49
CCL3-205ENST00000613928 WNT2BQ93097 391 aa12.02□□□□□ -0.49
CCL3-205ENST00000613928 LIMD1Q9UGP4 676 aa12.02□□□□□ -0.49
CCL3-205ENST00000613928 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
CCL3-205ENST00000613928 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
CCL3-205ENST00000613928 POTEMA6NI47 508 aa12.01□□□□□ -0.49
CCL3-205ENST00000613928 HOXA2O43364 376 aa12.01□□□□□ -0.49
CCL3-205ENST00000613928 PRR14Q9BWN1 585 aa12.01□□□□□ -0.49
CCL3-205ENST00000613928 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
CCL3-205ENST00000613928 MAGI2Q86UL8 1455 aa12.01□□□□□ -0.49
CCL3-205ENST00000613928 ATP7AQ04656 1500 aa12□□□□□ -0.49
CCL3-205ENST00000613928 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
CCL3-205ENST00000613928 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
CCL3-205ENST00000613928 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
CCL3-205ENST00000613928 NDUFV2P19404 249 aa11.98□□□□□ -0.49
CCL3-205ENST00000613928 PPP4CP60510 307 aa11.98□□□□□ -0.49
CCL3-205ENST00000613928 FUT2Q10981 343 aa11.98□□□□□ -0.49
CCL3-205ENST00000613928 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
CCL3-205ENST00000613928 IQGAP3Q86VI3 1631 aa11.97□□□□□ -0.49
CCL3-205ENST00000613928 BCAMP50895 628 aa11.97□□□□□ -0.49
CCL3-205ENST00000613928 FLIIQ13045 1269 aa11.97□□□□□ -0.49
CCL3-205ENST00000613928 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
CCL3-205ENST00000613928 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
CCL3-205ENST00000613928 ATP10AO60312 1499 aa11.96□□□□□ -0.49
CCL3-205ENST00000613928 FDX1P10109 184 aa11.96□□□□□ -0.49
CCL3-205ENST00000613928 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
CCL3-205ENST00000613928 UHRF1BP1Q6BDS2 1440 aa11.95□□□□□ -0.5
CCL3-205ENST00000613928 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
CCL3-205ENST00000613928 ACTN4O43707 911 aaKnown RBP11.95□□□□□ -0.5
CCL3-205ENST00000613928 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
CCL3-205ENST00000613928 PPP2R2DQ66LE6 453 aa11.95□□□□□ -0.5
CCL3-205ENST00000613928 KDM5CP41229 1560 aa11.95□□□□□ -0.5
CCL3-205ENST00000613928 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
CCL3-205ENST00000613928 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
CCL3-205ENST00000613928 C3P01024 1663 aa11.94□□□□□ -0.5
CCL3-205ENST00000613928 DHX29Q7Z478 1369 aaKnown RBP11.93□□□□□ -0.5
CCL3-205ENST00000613928 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
CCL3-205ENST00000613928 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
CCL3-205ENST00000613928 DEPDC5O75140 1603 aa11.93□□□□□ -0.5
CCL3-205ENST00000613928 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
CCL3-205ENST00000613928 LILRB3O75022 631 aa11.92□□□□□ -0.5
CCL3-205ENST00000613928 RFC5P40937 340 aa11.92□□□□□ -0.5
CCL3-205ENST00000613928 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
CCL3-205ENST00000613928 PCDHB15Q9Y5E8 787 aa11.92□□□□□ -0.5
CCL3-205ENST00000613928 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
CCL3-205ENST00000613928 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
CCL3-205ENST00000613928 QPCTQ16769 361 aa11.91□□□□□ -0.5
CCL3-205ENST00000613928 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
CCL3-205ENST00000613928 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
CCL3-205ENST00000613928 DIP2CQ9Y2E4 1556 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms