RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 AXIN2Q9Y2T1 843 aa24.2■■□□□ 1.46
CCL3-204ENST00000613922 DISP2A7MBM2 1401 aa24.19■■□□□ 1.46
CCL3-204ENST00000613922 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
CCL3-204ENST00000613922 SRCAPQ6ZRS2 3230 aa24.18■■□□□ 1.46
CCL3-204ENST00000613922 A0A1W2PP64 1363 aa24.18■■□□□ 1.46
CCL3-204ENST00000613922 NINLQ9Y2I6 1382 aa24.18■■□□□ 1.46
CCL3-204ENST00000613922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
CCL3-204ENST00000613922 WDR17Q8IZU2 1322 aa24.17■■□□□ 1.46
CCL3-204ENST00000613922 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
CCL3-204ENST00000613922 TERF2IPQ9NYB0 399 aa24.17■■□□□ 1.46
CCL3-204ENST00000613922 LTN1O94822 1766 aa24.16■■□□□ 1.46
CCL3-204ENST00000613922 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
CCL3-204ENST00000613922 NME9Q86XW9 330 aa24.16■■□□□ 1.46
CCL3-204ENST00000613922 TIMELESSQ9UNS1 1208 aa24.16■■□□□ 1.46
CCL3-204ENST00000613922 LRRC37A3O60309 1634 aa24.15■■□□□ 1.46
CCL3-204ENST00000613922 SOX12O15370 315 aa24.15■■□□□ 1.46
CCL3-204ENST00000613922 USP47Q96K76 1375 aa24.15■■□□□ 1.46
CCL3-204ENST00000613922 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
CCL3-204ENST00000613922 PEAK1Q9H792 1746 aa24.13■■□□□ 1.45
CCL3-204ENST00000613922 EN1Q05925 392 aaPredicted RBP24.12■■□□□ 1.45
CCL3-204ENST00000613922 OVOS2A0A0J9YW53 1432 aa24.11■■□□□ 1.45
CCL3-204ENST00000613922 OVOS2Q6IE36 1432 aa24.11■■□□□ 1.45
CCL3-204ENST00000613922 TRIM37O94972 964 aa24.11■■□□□ 1.45
CCL3-204ENST00000613922 SBF2Q86WG5 1849 aa24.11■■□□□ 1.45
CCL3-204ENST00000613922 CARD10Q9BWT7 1032 aa24.1■■□□□ 1.45
CCL3-204ENST00000613922 PCGF6Q9BYE7 350 aa24.09■■□□□ 1.45
CCL3-204ENST00000613922 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
CCL3-204ENST00000613922 TMF1P82094 1093 aa24.07■■□□□ 1.44
CCL3-204ENST00000613922 CDCA7Q9BWT1 371 aaPredicted RBP24.07■■□□□ 1.44
CCL3-204ENST00000613922 ANKRD36BQ8N2N9 1353 aa24.06■■□□□ 1.44
CCL3-204ENST00000613922 CSB-PGBD3P0DP91 1061 aa24.06■■□□□ 1.44
CCL3-204ENST00000613922 DDB1Q16531 1140 aa24.06■■□□□ 1.44
CCL3-204ENST00000613922 CAMKK2Q96RR4 588 aa24.06■■□□□ 1.44
CCL3-204ENST00000613922 OVOS2A0A0G2JMS6 1433 aa24.06■■□□□ 1.44
CCL3-204ENST00000613922 RREB1Q92766 1687 aa24.05■■□□□ 1.44
CCL3-204ENST00000613922 CCDC7Q96M83 1385 aa24.05■■□□□ 1.44
CCL3-204ENST00000613922 PARD3Q8TEW0 1356 aa24.04■■□□□ 1.44
CCL3-204ENST00000613922 APBA3O96018 575 aa24.04■■□□□ 1.44
CCL3-204ENST00000613922 EZH2Q15910 746 aaKnown RBP24.04■■□□□ 1.44
CCL3-204ENST00000613922 ERBB3P21860 1342 aa24.04■■□□□ 1.44
CCL3-204ENST00000613922 BCL9O00512 1426 aa24.01■■□□□ 1.43
CCL3-204ENST00000613922 NUP188Q5SRE5 1749 aa24.01■■□□□ 1.43
CCL3-204ENST00000613922 RGPD3A6NKT7 1758 aaPredicted RBP24.01■■□□□ 1.43
CCL3-204ENST00000613922 RGPD4Q7Z3J3 1758 aa24.01■■□□□ 1.43
CCL3-204ENST00000613922 LRP5O75197 1615 aa24■■□□□ 1.43
CCL3-204ENST00000613922 CDCA8Q53HL2 280 aa24■■□□□ 1.43
CCL3-204ENST00000613922 MYOM1P52179 1685 aa23.99■■□□□ 1.43
CCL3-204ENST00000613922 FAM208AQ9UK61 1670 aaKnown RBP23.99■■□□□ 1.43
CCL3-204ENST00000613922 MARCH10Q8NA82 808 aaPredicted RBP23.99■■□□□ 1.43
CCL3-204ENST00000613922 PSDA5PKW4 1024 aaPredicted RBP23.98■■□□□ 1.43
CCL3-204ENST00000613922 COG3Q96JB2 828 aa23.98■■□□□ 1.43
CCL3-204ENST00000613922 KIF20BQ96Q89 1820 aa23.98■■□□□ 1.43
CCL3-204ENST00000613922 TNS2Q63HR2 1409 aa23.97■■□□□ 1.43
CCL3-204ENST00000613922 ANKRD24Q8TF21 1146 aa23.97■■□□□ 1.43
CCL3-204ENST00000613922 IP6K1Q92551 441 aa23.97■■□□□ 1.43
CCL3-204ENST00000613922 EXOC5O00471 708 aa23.95■■□□□ 1.42
CCL3-204ENST00000613922 NLRP2Q9NX02 1062 aa23.95■■□□□ 1.42
CCL3-204ENST00000613922 FYB1O15117 783 aa23.94■■□□□ 1.42
CCL3-204ENST00000613922 MAP3K19Q56UN5 1328 aa23.93■■□□□ 1.42
CCL3-204ENST00000613922 R3HDM1Q15032 1099 aaKnown RBP23.92■■□□□ 1.42
CCL3-204ENST00000613922 BCL11BQ9C0K0 894 aaPredicted RBP23.92■■□□□ 1.42
CCL3-204ENST00000613922 RGPD2P0DJD1 1756 aa23.91■■□□□ 1.42
CCL3-204ENST00000613922 PLSCR1O15162 318 aa23.91■■□□□ 1.42
CCL3-204ENST00000613922 IL2RBP14784 551 aa23.9■■□□□ 1.42
CCL3-204ENST00000613922 HOXC9P31274 260 aa23.9■■□□□ 1.42
CCL3-204ENST00000613922 FBLN1P23142 703 aa23.89■■□□□ 1.41
CCL3-204ENST00000613922 PTF1AQ7RTS3 328 aa23.89■■□□□ 1.41
CCL3-204ENST00000613922 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.41
CCL3-204ENST00000613922 GGNBP2Q9H3C7 697 aa23.89■■□□□ 1.41
CCL3-204ENST00000613922 RTL1A6NKG5 1358 aa23.89■■□□□ 1.41
CCL3-204ENST00000613922 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
CCL3-204ENST00000613922 NHSQ6T4R5 1651 aa23.88■■□□□ 1.41
CCL3-204ENST00000613922 AMPHP49418 695 aa23.87■■□□□ 1.41
CCL3-204ENST00000613922 CARD14Q9BXL6 1004 aa23.87■■□□□ 1.41
CCL3-204ENST00000613922 NBPF14Q5TI25 921 aa23.85■■□□□ 1.41
CCL3-204ENST00000613922 LTV1Q96GA3 475 aaPredicted RBP23.85■■□□□ 1.41
CCL3-204ENST00000613922 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
CCL3-204ENST00000613922 RRS1Q15050 365 aaKnown RBP23.84■■□□□ 1.41
CCL3-204ENST00000613922 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
CCL3-204ENST00000613922 KIF24Q5T7B8 1368 aa23.8■■□□□ 1.4
CCL3-204ENST00000613922 BTAF1O14981 1849 aa23.8■■□□□ 1.4
CCL3-204ENST00000613922 EIF4G2P78344 907 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCL3-204ENST00000613922 PROM2Q8N271 834 aa23.8■■□□□ 1.4
CCL3-204ENST00000613922 KCNQ2O43526 872 aa23.79■■□□□ 1.4
CCL3-204ENST00000613922 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
CCL3-204ENST00000613922 MAP2P11137 1827 aaKnown RBP23.79■■□□□ 1.4
CCL3-204ENST00000613922 ANKRD26Q9UPS8 1709 aa23.79■■□□□ 1.4
CCL3-204ENST00000613922 INSRP06213 1382 aa23.78■■□□□ 1.4
CCL3-204ENST00000613922 ACSBG1Q96GR2 724 aa23.77■■□□□ 1.4
CCL3-204ENST00000613922 FLT4P35916 1363 aa23.77■■□□□ 1.4
CCL3-204ENST00000613922 MEGF6O75095 1541 aa23.76■■□□□ 1.39
CCL3-204ENST00000613922 NBPF6Q5VWK0 638 aa23.76■■□□□ 1.39
CCL3-204ENST00000613922 NBPF4Q96M43 638 aa23.76■■□□□ 1.39
CCL3-204ENST00000613922 SMG6Q86US8 1419 aaKnown RBP23.76■■□□□ 1.39
CCL3-204ENST00000613922 TXNRD1Q16881 649 aa23.75■■□□□ 1.39
CCL3-204ENST00000613922 ANO8Q9HCE9 1232 aaPredicted RBP23.75■■□□□ 1.39
CCL3-204ENST00000613922 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
CCL3-204ENST00000613922 HSP90AB2PQ58FF8 381 aa23.74■■□□□ 1.39
CCL3-204ENST00000613922 CGNL1Q0VF96 1302 aa23.74■■□□□ 1.39
CCL3-204ENST00000613922 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms