RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 FYB1O15117 783 aa28.08■■■□□ 2.09
POLR2J3-220ENST00000613744 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
POLR2J3-220ENST00000613744 NRKQ7Z2Y5 1582 aa28.07■■■□□ 2.08
POLR2J3-220ENST00000613744 ABTB2Q8N961 1025 aa28.06■■■□□ 2.08
POLR2J3-220ENST00000613744 PXDNQ92626 1479 aa28.06■■■□□ 2.08
POLR2J3-220ENST00000613744 NHSL1Q5SYE7 1610 aa28.04■■■□□ 2.08
POLR2J3-220ENST00000613744 SOS2Q07890 1332 aaPredicted RBP28.04■■■□□ 2.08
POLR2J3-220ENST00000613744 TRPM3Q9HCF6 1732 aaPredicted RBP28.03■■■□□ 2.08
POLR2J3-220ENST00000613744 TNNT2P45379 298 aaPredicted RBP28.03■■■□□ 2.08
POLR2J3-220ENST00000613744 C20orf194Q5TEA3 1177 aa28.03■■■□□ 2.08
POLR2J3-220ENST00000613744 BECN1Q14457 450 aa28.02■■■□□ 2.08
POLR2J3-220ENST00000613744 TTC21AQ8NDW8 1320 aa28.01■■■□□ 2.08
POLR2J3-220ENST00000613744 NLRP6P59044 892 aa28.01■■■□□ 2.07
POLR2J3-220ENST00000613744 SOX12O15370 315 aa27.99■■■□□ 2.07
POLR2J3-220ENST00000613744 KIF20BQ96Q89 1820 aa27.99■■■□□ 2.07
POLR2J3-220ENST00000613744 PIK3C2AO00443 1686 aa27.99■■■□□ 2.07
POLR2J3-220ENST00000613744 SPATA31A3Q5VYP0 1347 aa27.98■■■□□ 2.07
POLR2J3-220ENST00000613744 FBLN1P23142 703 aa27.98■■■□□ 2.07
POLR2J3-220ENST00000613744 PHLPP1O60346 1717 aa27.98■■■□□ 2.07
POLR2J3-220ENST00000613744 AHDC1Q5TGY3 1603 aaPredicted RBP27.97■■■□□ 2.07
POLR2J3-220ENST00000613744 MORC1Q86VD1 984 aa27.97■■■□□ 2.07
POLR2J3-220ENST00000613744 SBNO1A3KN83 1393 aa27.97■■■□□ 2.07
POLR2J3-220ENST00000613744 NPC1L1Q9UHC9 1359 aa27.97■■■□□ 2.07
POLR2J3-220ENST00000613744 DUSP27Q5VZP5 1158 aa27.96■■■□□ 2.07
POLR2J3-220ENST00000613744 COG3Q96JB2 828 aa27.96■■■□□ 2.07
POLR2J3-220ENST00000613744 TNS3Q68CZ2 1445 aa27.96■■■□□ 2.07
POLR2J3-220ENST00000613744 PKNOX2Q96KN3 472 aa27.96■■■□□ 2.07
POLR2J3-220ENST00000613744 RRAGDQ9NQL2 400 aaPredicted RBP27.96■■■□□ 2.07
POLR2J3-220ENST00000613744 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
POLR2J3-220ENST00000613744 ZNF521Q96K83 1311 aa27.94■■■□□ 2.06
POLR2J3-220ENST00000613744 LRRC59Q96AG4 307 aaKnown RBP27.93■■■□□ 2.06
POLR2J3-220ENST00000613744 ALS2Q96Q42 1657 aa27.93■■■□□ 2.06
POLR2J3-220ENST00000613744 HSPA1LP34931 641 aa27.92■■■□□ 2.06
POLR2J3-220ENST00000613744 USP19O94966 1318 aa27.92■■■□□ 2.06
POLR2J3-220ENST00000613744 COL16A1Q07092 1604 aaPredicted RBP27.91■■■□□ 2.06
POLR2J3-220ENST00000613744 NSD2O96028 1365 aa27.91■■■□□ 2.06
POLR2J3-220ENST00000613744 MAPK8IP3Q9UPT6 1336 aa27.9■■■□□ 2.06
POLR2J3-220ENST00000613744 OVOS2A0A0J9YW53 1432 aa27.9■■■□□ 2.06
POLR2J3-220ENST00000613744 OVOS2Q6IE36 1432 aa27.9■■■□□ 2.06
POLR2J3-220ENST00000613744 PPP2R1AP30153 589 aa27.89■■■□□ 2.06
POLR2J3-220ENST00000613744 GOLGA2Q08379 1002 aa27.88■■■□□ 2.05
POLR2J3-220ENST00000613744 USP31Q70CQ4 1352 aa27.88■■■□□ 2.05
POLR2J3-220ENST00000613744 ARHGEF10O15013 1369 aa27.87■■■□□ 2.05
POLR2J3-220ENST00000613744 MARF1Q9Y4F3 1742 aaKnown RBP27.87■■■□□ 2.05
POLR2J3-220ENST00000613744 CLCN1P35523 988 aa27.87■■■□□ 2.05
POLR2J3-220ENST00000613744 RGS3P49796 1198 aa27.87■■■□□ 2.05
POLR2J3-220ENST00000613744 ANKRD26Q9UPS8 1709 aa27.87■■■□□ 2.05
POLR2J3-220ENST00000613744 RRP9O43818 475 aaKnown RBP27.85■■■□□ 2.05
POLR2J3-220ENST00000613744 RRS1Q15050 365 aaKnown RBP27.85■■■□□ 2.05
POLR2J3-220ENST00000613744 ZBTB7CA1YPR0 619 aa27.84■■■□□ 2.05
POLR2J3-220ENST00000613744 MED1Q15648 1581 aaPredicted RBP27.84■■■□□ 2.05
POLR2J3-220ENST00000613744 TRMT2AQ8IZ69 625 aaKnown RBP27.83■■■□□ 2.05
POLR2J3-220ENST00000613744 ANTXR1Q9H6X2 564 aa27.83■■■□□ 2.05
POLR2J3-220ENST00000613744 FSD2A1L4K1 749 aa27.83■■■□□ 2.05
POLR2J3-220ENST00000613744 GCP02774 474 aa27.83■■■□□ 2.05
POLR2J3-220ENST00000613744 ADAMTS8Q9UP79 889 aa27.83■■■□□ 2.05
POLR2J3-220ENST00000613744 PNPLA6Q8IY17 1366 aa27.82■■■□□ 2.04
POLR2J3-220ENST00000613744 HAP1P54257 671 aaPredicted RBP27.82■■■□□ 2.04
POLR2J3-220ENST00000613744 SLFN5Q08AF3 891 aa27.82■■■□□ 2.04
POLR2J3-220ENST00000613744 ZC3H6P61129 1189 aaKnown RBP27.81■■■□□ 2.04
POLR2J3-220ENST00000613744 PNNQ9H307 717 aaKnown RBP27.81■■■□□ 2.04
POLR2J3-220ENST00000613744 EMILIN1Q9Y6C2 1016 aa27.8■■■□□ 2.04
POLR2J3-220ENST00000613744 GOLGA6L3A6NEY3 463 aa27.79■■■□□ 2.04
POLR2J3-220ENST00000613744 FBXO41Q8TF61 875 aa27.79■■■□□ 2.04
POLR2J3-220ENST00000613744 WDR43Q15061 677 aaKnown RBP eCLIP27.79■■■□□ 2.04
POLR2J3-220ENST00000613744 NUTM2BA6NNL0 878 aaPredicted RBP27.78■■■□□ 2.04
POLR2J3-220ENST00000613744 NUTM2EB1AL46 878 aaPredicted RBP27.78■■■□□ 2.04
POLR2J3-220ENST00000613744 NUTM2AQ8IVF1 878 aaPredicted RBP27.78■■■□□ 2.04
POLR2J3-220ENST00000613744 POLKQ9UBT6 870 aa27.77■■■□□ 2.04
POLR2J3-220ENST00000613744 USP54Q70EL1 1684 aa27.77■■■□□ 2.04
POLR2J3-220ENST00000613744 MTHFSP49914 203 aa27.77■■■□□ 2.04
POLR2J3-220ENST00000613744 NGEFQ8N5V2 710 aa27.76■■■□□ 2.03
POLR2J3-220ENST00000613744 KCNH5Q8NCM2 988 aa27.76■■■□□ 2.03
POLR2J3-220ENST00000613744 MAP2P11137 1827 aaKnown RBP27.76■■■□□ 2.03
POLR2J3-220ENST00000613744 HSP90AA1P07900 732 aaKnown RBP27.76■■■□□ 2.03
POLR2J3-220ENST00000613744 AAMPQ13685 434 aa27.76■■■□□ 2.03
POLR2J3-220ENST00000613744 SLIT3O75094 1523 aa27.75■■■□□ 2.03
POLR2J3-220ENST00000613744 PHRF1Q9P1Y6 1649 aaKnown RBP27.75■■■□□ 2.03
POLR2J3-220ENST00000613744 PDE3AQ14432 1141 aa27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 ISY1Q9ULR0 285 aaKnown RBP27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 MAP3K19Q56UN5 1328 aa27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 CRYBG1Q9Y4K1 1723 aa27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 XRCC6P12956 609 aaKnown RBP eCLIP27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 JCADQ9P266 1359 aa27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 NFAT5O94916 1531 aa27.74■■■□□ 2.03
POLR2J3-220ENST00000613744 HSP90AA2PQ14568 343 aaPredicted RBP27.72■■■□□ 2.03
POLR2J3-220ENST00000613744 UPF2Q9HAU5 1272 aaKnown RBP27.72■■■□□ 2.03
POLR2J3-220ENST00000613744 CHRNA2Q15822 529 aa27.72■■■□□ 2.03
POLR2J3-220ENST00000613744 NAP1L5Q96NT1 182 aaPredicted RBP27.72■■■□□ 2.03
POLR2J3-220ENST00000613744 AATKQ6ZMQ8 1374 aa27.71■■■□□ 2.03
POLR2J3-220ENST00000613744 ADAMTS2O95450 1211 aa27.71■■■□□ 2.03
POLR2J3-220ENST00000613744 ABCA3Q99758 1704 aa27.71■■■□□ 2.03
POLR2J3-220ENST00000613744 AMPHP49418 695 aa27.7■■■□□ 2.02
POLR2J3-220ENST00000613744 COL22A1Q8NFW1 1626 aaPredicted RBP27.7■■■□□ 2.02
POLR2J3-220ENST00000613744 KIAA0232Q92628 1395 aa27.7■■■□□ 2.02
POLR2J3-220ENST00000613744 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
POLR2J3-220ENST00000613744 SHPRHQ149N8 1683 aa27.68■■■□□ 2.02
POLR2J3-220ENST00000613744 LTN1O94822 1766 aa27.68■■■□□ 2.02
POLR2J3-220ENST00000613744 MRE11P49959 708 aa27.68■■■□□ 2.02
POLR2J3-220ENST00000613744 TBC1D32Q96NH3 1257 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms