RNA–Protein interactions for RNA: ENST00000613548.1

PCDH8-203, Transcript of protocadherin 8, humanhuman

TSL 2

Gene PCDH8, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-203ENST00000613548 RTL1A6NKG5 1358 aa21.13■□□□□ 0.97
PCDH8-203ENST00000613548 UNC5CLQ8IV45 518 aa21.13■□□□□ 0.97
PCDH8-203ENST00000613548 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
PCDH8-203ENST00000613548 LRRC37A3O60309 1634 aa21.13■□□□□ 0.97
PCDH8-203ENST00000613548 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
PCDH8-203ENST00000613548 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
PCDH8-203ENST00000613548 SOX12O15370 315 aa21.12■□□□□ 0.97
PCDH8-203ENST00000613548 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
PCDH8-203ENST00000613548 VPS72Q15906 364 aa21.09■□□□□ 0.97
PCDH8-203ENST00000613548 NPC1L1Q9UHC9 1359 aa21.09■□□□□ 0.97
PCDH8-203ENST00000613548 CRB1P82279 1406 aa21.08■□□□□ 0.97
PCDH8-203ENST00000613548 AMER1Q5JTC6 1135 aaPredicted RBP21.08■□□□□ 0.97
PCDH8-203ENST00000613548 KIF24Q5T7B8 1368 aa21.08■□□□□ 0.96
PCDH8-203ENST00000613548 MAP3K19Q56UN5 1328 aa21.07■□□□□ 0.96
PCDH8-203ENST00000613548 PER1O15534 1290 aaPredicted RBP21.07■□□□□ 0.96
PCDH8-203ENST00000613548 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
PCDH8-203ENST00000613548 EP400Q96L91 3159 aa21.06■□□□□ 0.96
PCDH8-203ENST00000613548 ILDR2Q71H61 639 aa21.06■□□□□ 0.96
PCDH8-203ENST00000613548 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
PCDH8-203ENST00000613548 RGPD1P0DJD0 1748 aa21.06■□□□□ 0.96
PCDH8-203ENST00000613548 ZBTB7CA1YPR0 619 aa21.05■□□□□ 0.96
PCDH8-203ENST00000613548 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
PCDH8-203ENST00000613548 KNSTRNQ9Y448 316 aa21.05■□□□□ 0.96
PCDH8-203ENST00000613548 SPATA31A5Q5VU36 1347 aa21.04■□□□□ 0.96
PCDH8-203ENST00000613548 SPATA31A7Q8IWB4 1347 aa21.04■□□□□ 0.96
PCDH8-203ENST00000613548 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
PCDH8-203ENST00000613548 FLT4P35916 1363 aa21.04■□□□□ 0.96
PCDH8-203ENST00000613548 ERBB3P21860 1342 aa21.04■□□□□ 0.96
PCDH8-203ENST00000613548 GJD4Q96KN9 370 aaPredicted RBP21.03■□□□□ 0.96
PCDH8-203ENST00000613548 WDR17Q8IZU2 1322 aa21.03■□□□□ 0.96
PCDH8-203ENST00000613548 RXRBP28702 533 aa21.02■□□□□ 0.96
PCDH8-203ENST00000613548 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
PCDH8-203ENST00000613548 SPATA31A1Q5TZJ5 1347 aa21.02■□□□□ 0.95
PCDH8-203ENST00000613548 FBLN1P23142 703 aa21.01■□□□□ 0.95
PCDH8-203ENST00000613548 RRS1Q15050 365 aaKnown RBP21.01■□□□□ 0.95
PCDH8-203ENST00000613548 HOXC9P31274 260 aa21■□□□□ 0.95
PCDH8-203ENST00000613548 DISP2A7MBM2 1401 aa21■□□□□ 0.95
PCDH8-203ENST00000613548 PKD1L3Q7Z443 1732 aa21■□□□□ 0.95
PCDH8-203ENST00000613548 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
PCDH8-203ENST00000613548 IP6K1Q92551 441 aa20.99■□□□□ 0.95
PCDH8-203ENST00000613548 SBF2Q86WG5 1849 aa20.99■□□□□ 0.95
PCDH8-203ENST00000613548 INSRP06213 1382 aa20.98■□□□□ 0.95
PCDH8-203ENST00000613548 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
PCDH8-203ENST00000613548 CCDC9Q9Y3X0 531 aaKnown RBP20.97■□□□□ 0.95
PCDH8-203ENST00000613548 EMILIN1Q9Y6C2 1016 aa20.97■□□□□ 0.95
PCDH8-203ENST00000613548 TNS1Q9HBL0 1735 aaKnown RBP20.96■□□□□ 0.95
PCDH8-203ENST00000613548 COL3A1P02461 1466 aaPredicted RBP20.95■□□□□ 0.94
PCDH8-203ENST00000613548 AMPHP49418 695 aa20.94■□□□□ 0.94
PCDH8-203ENST00000613548 EVA1CP58658 441 aa20.94■□□□□ 0.94
PCDH8-203ENST00000613548 MORC1Q86VD1 984 aa20.94■□□□□ 0.94
PCDH8-203ENST00000613548 ANKRD24Q8TF21 1146 aa20.94■□□□□ 0.94
PCDH8-203ENST00000613548 TNS2Q63HR2 1409 aa20.94■□□□□ 0.94
PCDH8-203ENST00000613548 VIRMAQ69YN4 1812 aaKnown RBP20.93■□□□□ 0.94
PCDH8-203ENST00000613548 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
PCDH8-203ENST00000613548 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
PCDH8-203ENST00000613548 ONECUT3O60422 494 aaPredicted RBP20.92■□□□□ 0.94
PCDH8-203ENST00000613548 TNNT2P45379 298 aaPredicted RBP20.92■□□□□ 0.94
PCDH8-203ENST00000613548 FAM98CQ17RN3 349 aaKnown RBP20.92■□□□□ 0.94
PCDH8-203ENST00000613548 BARGINQ6ZT62 677 aa20.92■□□□□ 0.94
PCDH8-203ENST00000613548 TOM1L2Q6ZVM7 507 aa20.91■□□□□ 0.94
PCDH8-203ENST00000613548 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
PCDH8-203ENST00000613548 PARD3Q8TEW0 1356 aa20.91■□□□□ 0.94
PCDH8-203ENST00000613548 CARD10Q9BWT7 1032 aa20.91■□□□□ 0.94
PCDH8-203ENST00000613548 THRAP3Q9Y2W1 955 aaKnown RBP20.91■□□□□ 0.94
PCDH8-203ENST00000613548 MEGF6O75095 1541 aa20.9■□□□□ 0.94
PCDH8-203ENST00000613548 CSB-PGBD3P0DP91 1061 aa20.9■□□□□ 0.94
PCDH8-203ENST00000613548 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
PCDH8-203ENST00000613548 USP35Q9P2H5 1018 aa20.89■□□□□ 0.93
PCDH8-203ENST00000613548 DOT1LQ8TEK3 1739 aa20.89■□□□□ 0.93
PCDH8-203ENST00000613548 NHSQ6T4R5 1651 aa20.87■□□□□ 0.93
PCDH8-203ENST00000613548 SEPT12Q8IYM1 358 aa20.87■□□□□ 0.93
PCDH8-203ENST00000613548 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
PCDH8-203ENST00000613548 DDX10Q13206 875 aaKnown RBP20.86■□□□□ 0.93
PCDH8-203ENST00000613548 LTV1Q96GA3 475 aaPredicted RBP20.86■□□□□ 0.93
PCDH8-203ENST00000613548 OVOS2A0A0G2JMS6 1433 aa20.86■□□□□ 0.93
PCDH8-203ENST00000613548 NLRP2Q9NX02 1062 aa20.85■□□□□ 0.93
PCDH8-203ENST00000613548 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
PCDH8-203ENST00000613548 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
PCDH8-203ENST00000613548 RGPD3A6NKT7 1758 aaPredicted RBP20.84■□□□□ 0.93
PCDH8-203ENST00000613548 RGPD4Q7Z3J3 1758 aa20.84■□□□□ 0.93
PCDH8-203ENST00000613548 A0A0G2JS52 829 aa20.83■□□□□ 0.93
PCDH8-203ENST00000613548 MYT1Q01538 1121 aa20.83■□□□□ 0.93
PCDH8-203ENST00000613548 CDCA7Q9BWT1 371 aaPredicted RBP20.82■□□□□ 0.92
PCDH8-203ENST00000613548 EIF4A2Q14240 407 aaKnown RBP20.81■□□□□ 0.92
PCDH8-203ENST00000613548 ITGB4P16144 1822 aa20.81■□□□□ 0.92
PCDH8-203ENST00000613548 IGSF1Q8N6C5 1336 aa20.8■□□□□ 0.92
PCDH8-203ENST00000613548 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
PCDH8-203ENST00000613548 NBPF6Q5VWK0 638 aa20.8■□□□□ 0.92
PCDH8-203ENST00000613548 NBPF4Q96M43 638 aa20.8■□□□□ 0.92
PCDH8-203ENST00000613548 PLEKHG2Q9H7P9 1386 aa20.8■□□□□ 0.92
PCDH8-203ENST00000613548 KAT6BQ8WYB5 2073 aa20.79■□□□□ 0.92
PCDH8-203ENST00000613548 BTAF1O14981 1849 aa20.79■□□□□ 0.92
PCDH8-203ENST00000613548 MTHFSP49914 203 aa20.79■□□□□ 0.92
PCDH8-203ENST00000613548 KRT27Q7Z3Y8 459 aa20.79■□□□□ 0.92
PCDH8-203ENST00000613548 KDRP35968 1356 aa20.78■□□□□ 0.92
PCDH8-203ENST00000613548 IL2RBP14784 551 aa20.78■□□□□ 0.92
PCDH8-203ENST00000613548 USHBP1Q8N6Y0 703 aa20.78■□□□□ 0.92
PCDH8-203ENST00000613548 RREB1Q92766 1687 aa20.77■□□□□ 0.92
PCDH8-203ENST00000613548 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
PCDH8-203ENST00000613548 BCL9O00512 1426 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms