RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 ARHGEF10O15013 1369 aa22.66■■□□□ 1.22
LSP1-217ENST00000612798 PLEKHF1Q96S99 279 aa22.65■■□□□ 1.22
LSP1-217ENST00000612798 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
LSP1-217ENST00000612798 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.21
LSP1-217ENST00000612798 UBAP1LF5GYI3 381 aa22.64■■□□□ 1.21
LSP1-217ENST00000612798 TOM1O60784 492 aa22.64■■□□□ 1.21
LSP1-217ENST00000612798 NEUROD2Q15784 382 aa22.64■■□□□ 1.21
LSP1-217ENST00000612798 IP6K1Q92551 441 aa22.64■■□□□ 1.21
LSP1-217ENST00000612798 RSPH6AQ9H0K4 717 aa22.64■■□□□ 1.21
LSP1-217ENST00000612798 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
LSP1-217ENST00000612798 TCP11L2Q8N4U5 519 aa22.63■■□□□ 1.21
LSP1-217ENST00000612798 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
LSP1-217ENST00000612798 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
LSP1-217ENST00000612798 AXIN2Q9Y2T1 843 aa22.61■■□□□ 1.21
LSP1-217ENST00000612798 KIF24Q5T7B8 1368 aa22.61■■□□□ 1.21
LSP1-217ENST00000612798 FCHSD2O94868 740 aa22.6■■□□□ 1.21
LSP1-217ENST00000612798 SULT6B1Q6IMI4 303 aa22.6■■□□□ 1.21
LSP1-217ENST00000612798 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
LSP1-217ENST00000612798 CERKQ8TCT0 537 aa22.6■■□□□ 1.21
LSP1-217ENST00000612798 EYA1Q99502 592 aa22.6■■□□□ 1.21
LSP1-217ENST00000612798 IQSEC2Q5JU85 1478 aa22.59■■□□□ 1.21
LSP1-217ENST00000612798 AHDC1Q5TGY3 1603 aaPredicted RBP22.59■■□□□ 1.21
LSP1-217ENST00000612798 CHRNA2Q15822 529 aa22.59■■□□□ 1.21
LSP1-217ENST00000612798 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
LSP1-217ENST00000612798 CDCA7LQ96GN5 454 aa22.58■■□□□ 1.21
LSP1-217ENST00000612798 RGPD1P0DJD0 1748 aa22.58■■□□□ 1.21
LSP1-217ENST00000612798 LRRC59Q96AG4 307 aaKnown RBP22.56■■□□□ 1.2
LSP1-217ENST00000612798 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
LSP1-217ENST00000612798 KIAA0232Q92628 1395 aa22.56■■□□□ 1.2
LSP1-217ENST00000612798 USHBP1Q8N6Y0 703 aa22.56■■□□□ 1.2
LSP1-217ENST00000612798 RGPD5Q99666 1765 aa22.55■■□□□ 1.2
LSP1-217ENST00000612798 HAP1P54257 671 aaPredicted RBP22.55■■□□□ 1.2
LSP1-217ENST00000612798 ZNF521Q96K83 1311 aa22.55■■□□□ 1.2
LSP1-217ENST00000612798 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
LSP1-217ENST00000612798 IGSF1Q8N6C5 1336 aa22.54■■□□□ 1.2
LSP1-217ENST00000612798 TMPOP42166 694 aaKnown RBP22.54■■□□□ 1.2
LSP1-217ENST00000612798 ANKRD24Q8TF21 1146 aa22.54■■□□□ 1.2
LSP1-217ENST00000612798 GTF3C3Q9Y5Q9 886 aa22.54■■□□□ 1.2
LSP1-217ENST00000612798 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
LSP1-217ENST00000612798 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
LSP1-217ENST00000612798 PNNQ9H307 717 aaKnown RBP22.53■■□□□ 1.2
LSP1-217ENST00000612798 ABCA3Q99758 1704 aa22.53■■□□□ 1.2
LSP1-217ENST00000612798 RGPD2P0DJD1 1756 aa22.52■■□□□ 1.2
LSP1-217ENST00000612798 WWC1Q8IX03 1113 aa22.51■■□□□ 1.19
LSP1-217ENST00000612798 COL18A1P39060 1754 aa22.51■■□□□ 1.19
LSP1-217ENST00000612798 COL16A1Q07092 1604 aaPredicted RBP22.51■■□□□ 1.19
LSP1-217ENST00000612798 SPINK5Q9NQ38 1064 aaPredicted RBP22.51■■□□□ 1.19
LSP1-217ENST00000612798 CPDO75976 1380 aa22.5■■□□□ 1.19
LSP1-217ENST00000612798 RIPK4P57078 832 aa22.49■■□□□ 1.19
LSP1-217ENST00000612798 PRDM11Q9NQV5 511 aa22.49■■□□□ 1.19
LSP1-217ENST00000612798 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
LSP1-217ENST00000612798 NEFMP07197 916 aa22.48■■□□□ 1.19
LSP1-217ENST00000612798 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
LSP1-217ENST00000612798 KDRP35968 1356 aa22.47■■□□□ 1.19
LSP1-217ENST00000612798 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
LSP1-217ENST00000612798 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
LSP1-217ENST00000612798 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
LSP1-217ENST00000612798 ERBB3P21860 1342 aa22.46■■□□□ 1.19
LSP1-217ENST00000612798 NGEFQ8N5V2 710 aa22.45■■□□□ 1.19
LSP1-217ENST00000612798 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
LSP1-217ENST00000612798 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
LSP1-217ENST00000612798 CAMTA1Q9Y6Y1 1673 aa22.43■■□□□ 1.18
LSP1-217ENST00000612798 SLFN5Q08AF3 891 aa22.43■■□□□ 1.18
LSP1-217ENST00000612798 COL22A1Q8NFW1 1626 aaPredicted RBP22.42■■□□□ 1.18
LSP1-217ENST00000612798 CSB-PGBD3P0DP91 1061 aa22.42■■□□□ 1.18
LSP1-217ENST00000612798 MTHFSDQ2M296 383 aaKnown RBP22.42■■□□□ 1.18
LSP1-217ENST00000612798 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
LSP1-217ENST00000612798 NLRP2Q9NX02 1062 aa22.42■■□□□ 1.18
LSP1-217ENST00000612798 DUSP27Q5VZP5 1158 aa22.41■■□□□ 1.18
LSP1-217ENST00000612798 DLG5Q8TDM6 1919 aa22.4■■□□□ 1.18
LSP1-217ENST00000612798 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
LSP1-217ENST00000612798 NUTM2BA6NNL0 878 aaPredicted RBP22.4■■□□□ 1.18
LSP1-217ENST00000612798 NUTM2EB1AL46 878 aaPredicted RBP22.4■■□□□ 1.18
LSP1-217ENST00000612798 DCTN1Q14203 1278 aa22.4■■□□□ 1.18
LSP1-217ENST00000612798 NUTM2AQ8IVF1 878 aaPredicted RBP22.4■■□□□ 1.18
LSP1-217ENST00000612798 NCBP3Q53F19 620 aaKnown RBP22.39■■□□□ 1.18
LSP1-217ENST00000612798 SUPT16HQ9Y5B9 1047 aaKnown RBP22.39■■□□□ 1.18
LSP1-217ENST00000612798 ABCC6O95255 1503 aa22.39■■□□□ 1.17
LSP1-217ENST00000612798 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
LSP1-217ENST00000612798 ADAMTS2O95450 1211 aa22.38■■□□□ 1.17
LSP1-217ENST00000612798 TRMT2AQ8IZ69 625 aaKnown RBP22.38■■□□□ 1.17
LSP1-217ENST00000612798 STRN4Q9NRL3 753 aa22.37■■□□□ 1.17
LSP1-217ENST00000612798 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
LSP1-217ENST00000612798 E9PSI1 815 aa22.37■■□□□ 1.17
LSP1-217ENST00000612798 COL5A2P05997 1499 aaPredicted RBP22.36■■□□□ 1.17
LSP1-217ENST00000612798 BTG4Q9NY30 223 aa22.35■■□□□ 1.17
LSP1-217ENST00000612798 MCM10Q7L590 875 aa22.34■■□□□ 1.17
LSP1-217ENST00000612798 HSPA1LP34931 641 aa22.34■■□□□ 1.17
LSP1-217ENST00000612798 LARP1Q6PKG0 1096 aaKnown RBP22.34■■□□□ 1.17
LSP1-217ENST00000612798 FAM208AQ9UK61 1670 aaKnown RBP22.34■■□□□ 1.17
LSP1-217ENST00000612798 WDR17Q8IZU2 1322 aa22.33■■□□□ 1.17
LSP1-217ENST00000612798 EVA1CP58658 441 aa22.33■■□□□ 1.17
LSP1-217ENST00000612798 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
LSP1-217ENST00000612798 TSR2Q969E8 191 aaKnown RBP22.33■■□□□ 1.17
LSP1-217ENST00000612798 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
LSP1-217ENST00000612798 GAS2L2Q8NHY3 880 aa22.32■■□□□ 1.16
LSP1-217ENST00000612798 COL14A1Q05707 1796 aaKnown RBP22.3■■□□□ 1.16
LSP1-217ENST00000612798 LMOD3Q0VAK6 560 aa22.3■■□□□ 1.16
LSP1-217ENST00000612798 MEGF6O75095 1541 aa22.29■■□□□ 1.16
LSP1-217ENST00000612798 JCADQ9P266 1359 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms