RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 WDR17Q8IZU2 1322 aa29.24■■■□□ 2.27
PMPCA-207ENST00000612553 NFAT5O94916 1531 aa29.24■■■□□ 2.27
PMPCA-207ENST00000612553 USP31Q70CQ4 1352 aa29.24■■■□□ 2.27
PMPCA-207ENST00000612553 ST20-MTHFSA0A0A6YYL1 179 aa29.23■■■□□ 2.27
PMPCA-207ENST00000612553 SLC24A1O60721 1099 aa29.23■■■□□ 2.27
PMPCA-207ENST00000612553 TERF2IPQ9NYB0 399 aa29.23■■■□□ 2.27
PMPCA-207ENST00000612553 RGPD5Q99666 1765 aa29.22■■■□□ 2.27
PMPCA-207ENST00000612553 USP54Q70EL1 1684 aa29.21■■■□□ 2.27
PMPCA-207ENST00000612553 TESK2Q96S53 571 aa29.21■■■□□ 2.27
PMPCA-207ENST00000612553 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.27
PMPCA-207ENST00000612553 NME9Q86XW9 330 aa29.2■■■□□ 2.26
PMPCA-207ENST00000612553 C11orf95C9JLR9 678 aaPredicted RBP29.19■■■□□ 2.26
PMPCA-207ENST00000612553 APBA3O96018 575 aa29.19■■■□□ 2.26
PMPCA-207ENST00000612553 A0A1W2PP64 1363 aa29.18■■■□□ 2.26
PMPCA-207ENST00000612553 EZH2Q15910 746 aaKnown RBP29.18■■■□□ 2.26
PMPCA-207ENST00000612553 ABCC6O95255 1503 aa29.18■■■□□ 2.26
PMPCA-207ENST00000612553 CSB-PGBD3P0DP91 1061 aa29.17■■■□□ 2.26
PMPCA-207ENST00000612553 DDB1Q16531 1140 aa29.17■■■□□ 2.26
PMPCA-207ENST00000612553 CAMKK2Q96RR4 588 aa29.17■■■□□ 2.26
PMPCA-207ENST00000612553 LRRC37A3O60309 1634 aa29.16■■■□□ 2.26
PMPCA-207ENST00000612553 NINLQ9Y2I6 1382 aa29.16■■■□□ 2.26
PMPCA-207ENST00000612553 PSDA5PKW4 1024 aaPredicted RBP29.16■■■□□ 2.26
PMPCA-207ENST00000612553 CDCA7Q9BWT1 371 aaPredicted RBP29.16■■■□□ 2.26
PMPCA-207ENST00000612553 WNK3Q9BYP7 1800 aa29.15■■■□□ 2.26
PMPCA-207ENST00000612553 PARD3Q8TEW0 1356 aa29.15■■■□□ 2.26
PMPCA-207ENST00000612553 CARD10Q9BWT7 1032 aa29.15■■■□□ 2.26
PMPCA-207ENST00000612553 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
PMPCA-207ENST00000612553 OVOS2A0A0J9YW53 1432 aa29.14■■■□□ 2.26
PMPCA-207ENST00000612553 OVOS2Q6IE36 1432 aa29.14■■■□□ 2.26
PMPCA-207ENST00000612553 PEAK1Q9H792 1746 aa29.11■■■□□ 2.25
PMPCA-207ENST00000612553 LTN1O94822 1766 aa29.11■■■□□ 2.25
PMPCA-207ENST00000612553 USP47Q96K76 1375 aa29.09■■■□□ 2.25
PMPCA-207ENST00000612553 CCDC7Q96M83 1385 aa29.09■■■□□ 2.25
PMPCA-207ENST00000612553 R3HDM1Q15032 1099 aaKnown RBP29.08■■■□□ 2.25
PMPCA-207ENST00000612553 LRP5O75197 1615 aa29.08■■■□□ 2.25
PMPCA-207ENST00000612553 TMF1P82094 1093 aa29.07■■■□□ 2.24
PMPCA-207ENST00000612553 RREB1Q92766 1687 aa29.07■■■□□ 2.24
PMPCA-207ENST00000612553 TIMELESSQ9UNS1 1208 aa29.07■■■□□ 2.24
PMPCA-207ENST00000612553 ERBB3P21860 1342 aa29.06■■■□□ 2.24
PMPCA-207ENST00000612553 SBF2Q86WG5 1849 aa29.06■■■□□ 2.24
PMPCA-207ENST00000612553 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
PMPCA-207ENST00000612553 EXOC5O00471 708 aa29.04■■■□□ 2.24
PMPCA-207ENST00000612553 MARCH10Q8NA82 808 aaPredicted RBP29.04■■■□□ 2.24
PMPCA-207ENST00000612553 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
PMPCA-207ENST00000612553 ANKRD36BQ8N2N9 1353 aa29.02■■■□□ 2.24
PMPCA-207ENST00000612553 NLRP2Q9NX02 1062 aa29.02■■■□□ 2.24
PMPCA-207ENST00000612553 NUP188Q5SRE5 1749 aa29.02■■■□□ 2.24
PMPCA-207ENST00000612553 BCL9O00512 1426 aa29.02■■■□□ 2.24
PMPCA-207ENST00000612553 ANKRD24Q8TF21 1146 aa29.01■■■□□ 2.23
PMPCA-207ENST00000612553 COG3Q96JB2 828 aa29.01■■■□□ 2.23
PMPCA-207ENST00000612553 BCL11BQ9C0K0 894 aaPredicted RBP29■■■□□ 2.23
PMPCA-207ENST00000612553 NBPF14Q5TI25 921 aa28.99■■■□□ 2.23
PMPCA-207ENST00000612553 PLSCR1O15162 318 aa28.98■■■□□ 2.23
PMPCA-207ENST00000612553 CDCA8Q53HL2 280 aa28.98■■■□□ 2.23
PMPCA-207ENST00000612553 RGPD3A6NKT7 1758 aaPredicted RBP28.98■■■□□ 2.23
PMPCA-207ENST00000612553 RGPD4Q7Z3J3 1758 aa28.98■■■□□ 2.23
PMPCA-207ENST00000612553 TNS2Q63HR2 1409 aa28.97■■■□□ 2.23
PMPCA-207ENST00000612553 IP6K1Q92551 441 aa28.97■■■□□ 2.23
PMPCA-207ENST00000612553 IL2RBP14784 551 aa28.95■■■□□ 2.22
PMPCA-207ENST00000612553 PTF1AQ7RTS3 328 aa28.93■■■□□ 2.22
PMPCA-207ENST00000612553 FAM208AQ9UK61 1670 aaKnown RBP28.91■■■□□ 2.22
PMPCA-207ENST00000612553 MAP3K19Q56UN5 1328 aa28.91■■■□□ 2.22
PMPCA-207ENST00000612553 FYB1O15117 783 aa28.9■■■□□ 2.22
PMPCA-207ENST00000612553 AMPHP49418 695 aa28.89■■■□□ 2.22
PMPCA-207ENST00000612553 LTV1Q96GA3 475 aaPredicted RBP28.89■■■□□ 2.22
PMPCA-207ENST00000612553 HOXC9P31274 260 aa28.88■■■□□ 2.21
PMPCA-207ENST00000612553 FBLN1P23142 703 aa28.87■■■□□ 2.21
PMPCA-207ENST00000612553 GGNBP2Q9H3C7 697 aa28.87■■■□□ 2.21
PMPCA-207ENST00000612553 NHSQ6T4R5 1651 aa28.84■■■□□ 2.21
PMPCA-207ENST00000612553 RTL1A6NKG5 1358 aa28.84■■■□□ 2.21
PMPCA-207ENST00000612553 KIF20BQ96Q89 1820 aa28.83■■■□□ 2.21
PMPCA-207ENST00000612553 KCNQ2O43526 872 aa28.83■■■□□ 2.21
PMPCA-207ENST00000612553 PROM2Q8N271 834 aa28.83■■■□□ 2.21
PMPCA-207ENST00000612553 MYOM1P52179 1685 aa28.83■■■□□ 2.21
PMPCA-207ENST00000612553 RRS1Q15050 365 aaKnown RBP28.81■■■□□ 2.2
PMPCA-207ENST00000612553 ACSBG1Q96GR2 724 aa28.81■■■□□ 2.2
PMPCA-207ENST00000612553 TXNRD1Q16881 649 aa28.8■■■□□ 2.2
PMPCA-207ENST00000612553 CCER1Q8TC90 406 aaPredicted RBP28.78■■■□□ 2.2
PMPCA-207ENST00000612553 CARD14Q9BXL6 1004 aa28.78■■■□□ 2.2
PMPCA-207ENST00000612553 ANO8Q9HCE9 1232 aaPredicted RBP28.78■■■□□ 2.2
PMPCA-207ENST00000612553 RGPD2P0DJD1 1756 aa28.78■■■□□ 2.2
PMPCA-207ENST00000612553 DDX54Q8TDD1 881 aaKnown RBP28.76■■■□□ 2.19
PMPCA-207ENST00000612553 NSD3Q9BZ95 1437 aa28.76■■■□□ 2.19
PMPCA-207ENST00000612553 SPON1Q9HCB6 807 aa28.75■■■□□ 2.19
PMPCA-207ENST00000612553 SMG6Q86US8 1419 aaKnown RBP28.75■■■□□ 2.19
PMPCA-207ENST00000612553 KAT6BQ8WYB5 2073 aa28.74■■■□□ 2.19
PMPCA-207ENST00000612553 BTAF1O14981 1849 aa28.73■■■□□ 2.19
PMPCA-207ENST00000612553 KIF24Q5T7B8 1368 aa28.73■■■□□ 2.19
PMPCA-207ENST00000612553 NBPF6Q5VWK0 638 aa28.72■■■□□ 2.19
PMPCA-207ENST00000612553 NBPF4Q96M43 638 aa28.72■■■□□ 2.19
PMPCA-207ENST00000612553 STK32BQ9NY57 414 aa28.71■■■□□ 2.19
PMPCA-207ENST00000612553 INSRP06213 1382 aa28.71■■■□□ 2.19
PMPCA-207ENST00000612553 FLT4P35916 1363 aa28.71■■■□□ 2.19
PMPCA-207ENST00000612553 EIF4G2P78344 907 aaKnown RBP eCLIP28.7■■■□□ 2.18
PMPCA-207ENST00000612553 ZCRB1Q8TBF4 217 aaKnown RBP28.7■■■□□ 2.18
PMPCA-207ENST00000612553 MEGF6O75095 1541 aa28.69■■■□□ 2.18
PMPCA-207ENST00000612553 HSP90AB2PQ58FF8 381 aa28.69■■■□□ 2.18
PMPCA-207ENST00000612553 CASZ1Q86V15 1759 aa28.69■■■□□ 2.18
PMPCA-207ENST00000612553 SLC15A2Q16348 729 aa28.68■■■□□ 2.18
PMPCA-207ENST00000612553 POLR3GLQ9BT43 218 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms