RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TONSLQ96HA7 1378 aa25.27■■□□□ 1.64
SSBP1-215ENST00000612337 NFAT5O94916 1531 aa25.26■■□□□ 1.63
SSBP1-215ENST00000612337 LRRC37A3O60309 1634 aa25.26■■□□□ 1.63
SSBP1-215ENST00000612337 RREB1Q92766 1687 aa25.26■■□□□ 1.63
SSBP1-215ENST00000612337 SOX12O15370 315 aa25.25■■□□□ 1.63
SSBP1-215ENST00000612337 OVOS2A0A0G2JMS6 1433 aa25.25■■□□□ 1.63
SSBP1-215ENST00000612337 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
SSBP1-215ENST00000612337 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
SSBP1-215ENST00000612337 PEAK1Q9H792 1746 aa25.24■■□□□ 1.63
SSBP1-215ENST00000612337 DDB1Q16531 1140 aa25.24■■□□□ 1.63
SSBP1-215ENST00000612337 WNK3Q9BYP7 1800 aa25.23■■□□□ 1.63
SSBP1-215ENST00000612337 RGPD5Q99666 1765 aa25.23■■□□□ 1.63
SSBP1-215ENST00000612337 CD163L1Q9NR16 1453 aa25.22■■□□□ 1.63
SSBP1-215ENST00000612337 CDCA7Q9BWT1 371 aaPredicted RBP25.22■■□□□ 1.63
SSBP1-215ENST00000612337 ABCC6O95255 1503 aa25.22■■□□□ 1.63
SSBP1-215ENST00000612337 USP31Q70CQ4 1352 aa25.21■■□□□ 1.63
SSBP1-215ENST00000612337 USP54Q70EL1 1684 aa25.21■■□□□ 1.63
SSBP1-215ENST00000612337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.21■■□□□ 1.63
SSBP1-215ENST00000612337 CARD10Q9BWT7 1032 aa25.21■■□□□ 1.63
SSBP1-215ENST00000612337 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.63
SSBP1-215ENST00000612337 CSB-PGBD3P0DP91 1061 aa25.19■■□□□ 1.62
SSBP1-215ENST00000612337 TMC1Q8TDI8 760 aa25.19■■□□□ 1.62
SSBP1-215ENST00000612337 SBF2Q86WG5 1849 aa25.19■■□□□ 1.62
SSBP1-215ENST00000612337 HDGFL2Q7Z4V5 671 aaPredicted RBP25.18■■□□□ 1.62
SSBP1-215ENST00000612337 NBPF14Q5TI25 921 aa25.17■■□□□ 1.62
SSBP1-215ENST00000612337 PUS7Q96PZ0 661 aaKnown RBP25.17■■□□□ 1.62
SSBP1-215ENST00000612337 SLC12A5Q9H2X9 1139 aa25.17■■□□□ 1.62
SSBP1-215ENST00000612337 NME9Q86XW9 330 aa25.16■■□□□ 1.62
SSBP1-215ENST00000612337 BCL9O00512 1426 aa25.15■■□□□ 1.62
SSBP1-215ENST00000612337 EDC4Q6P2E9 1401 aaKnown RBP25.15■■□□□ 1.62
SSBP1-215ENST00000612337 MARCH10Q8NA82 808 aaPredicted RBP25.15■■□□□ 1.62
SSBP1-215ENST00000612337 RGPD3A6NKT7 1758 aaPredicted RBP25.15■■□□□ 1.62
SSBP1-215ENST00000612337 RGPD4Q7Z3J3 1758 aa25.15■■□□□ 1.62
SSBP1-215ENST00000612337 CCDC7Q96M83 1385 aa25.15■■□□□ 1.62
SSBP1-215ENST00000612337 TERF2IPQ9NYB0 399 aa25.14■■□□□ 1.62
SSBP1-215ENST00000612337 PLSCR1O15162 318 aa25.13■■□□□ 1.61
SSBP1-215ENST00000612337 BCL11BQ9C0K0 894 aaPredicted RBP25.13■■□□□ 1.61
SSBP1-215ENST00000612337 A0A1W2PP64 1363 aa25.13■■□□□ 1.61
SSBP1-215ENST00000612337 ERBB3P21860 1342 aa25.11■■□□□ 1.61
SSBP1-215ENST00000612337 LTN1O94822 1766 aa25.1■■□□□ 1.61
SSBP1-215ENST00000612337 EXOC5O00471 708 aa25.1■■□□□ 1.61
SSBP1-215ENST00000612337 TESK2Q96S53 571 aa25.1■■□□□ 1.61
SSBP1-215ENST00000612337 NINLQ9Y2I6 1382 aa25.08■■□□□ 1.61
SSBP1-215ENST00000612337 ST20-MTHFSA0A0A6YYL1 179 aa25.08■■□□□ 1.61
SSBP1-215ENST00000612337 TRIM26Q12899 539 aaPredicted RBP25.08■■□□□ 1.61
SSBP1-215ENST00000612337 PTF1AQ7RTS3 328 aa25.08■■□□□ 1.61
SSBP1-215ENST00000612337 TNS2Q63HR2 1409 aa25.07■■□□□ 1.6
SSBP1-215ENST00000612337 SLC24A1O60721 1099 aa25.07■■□□□ 1.6
SSBP1-215ENST00000612337 NLRP2Q9NX02 1062 aa25.05■■□□□ 1.6
SSBP1-215ENST00000612337 ANKRD24Q8TF21 1146 aa25.03■■□□□ 1.6
SSBP1-215ENST00000612337 IL2RBP14784 551 aa25.01■■□□□ 1.59
SSBP1-215ENST00000612337 PROM2Q8N271 834 aa25.01■■□□□ 1.59
SSBP1-215ENST00000612337 ANO8Q9HCE9 1232 aaPredicted RBP25■■□□□ 1.59
SSBP1-215ENST00000612337 IP6K1Q92551 441 aa24.99■■□□□ 1.59
SSBP1-215ENST00000612337 SPON1Q9HCB6 807 aa24.99■■□□□ 1.59
SSBP1-215ENST00000612337 KCNQ2O43526 872 aa24.98■■□□□ 1.59
SSBP1-215ENST00000612337 NHSQ6T4R5 1651 aa24.97■■□□□ 1.59
SSBP1-215ENST00000612337 ANKRD36BQ8N2N9 1353 aa24.97■■□□□ 1.59
SSBP1-215ENST00000612337 COG3Q96JB2 828 aa24.97■■□□□ 1.59
SSBP1-215ENST00000612337 TXNRD1Q16881 649 aa24.96■■□□□ 1.59
SSBP1-215ENST00000612337 USP47Q96K76 1375 aa24.95■■□□□ 1.59
SSBP1-215ENST00000612337 FAM208AQ9UK61 1670 aaKnown RBP24.95■■□□□ 1.58
SSBP1-215ENST00000612337 CASZ1Q86V15 1759 aa24.95■■□□□ 1.58
SSBP1-215ENST00000612337 TMF1P82094 1093 aa24.94■■□□□ 1.58
SSBP1-215ENST00000612337 ACSBG1Q96GR2 724 aa24.93■■□□□ 1.58
SSBP1-215ENST00000612337 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
SSBP1-215ENST00000612337 PPP1R1BQ9UD71 204 aaPredicted RBP24.92■■□□□ 1.58
SSBP1-215ENST00000612337 LTV1Q96GA3 475 aaPredicted RBP24.91■■□□□ 1.58
SSBP1-215ENST00000612337 HOXC9P31274 260 aa24.9■■□□□ 1.58
SSBP1-215ENST00000612337 STK32BQ9NY57 414 aa24.9■■□□□ 1.58
SSBP1-215ENST00000612337 FBLN1P23142 703 aa24.89■■□□□ 1.58
SSBP1-215ENST00000612337 AMPHP49418 695 aa24.89■■□□□ 1.58
SSBP1-215ENST00000612337 SLC15A2Q16348 729 aa24.88■■□□□ 1.57
SSBP1-215ENST00000612337 PDGFDQ9GZP0 370 aaPredicted RBP24.88■■□□□ 1.57
SSBP1-215ENST00000612337 KAT6BQ8WYB5 2073 aa24.88■■□□□ 1.57
SSBP1-215ENST00000612337 BTAF1O14981 1849 aa24.87■■□□□ 1.57
SSBP1-215ENST00000612337 FYB1O15117 783 aa24.87■■□□□ 1.57
SSBP1-215ENST00000612337 RTL1A6NKG5 1358 aa24.86■■□□□ 1.57
SSBP1-215ENST00000612337 CDCA8Q53HL2 280 aa24.86■■□□□ 1.57
SSBP1-215ENST00000612337 ZBTB7AO95365 584 aa24.84■■□□□ 1.57
SSBP1-215ENST00000612337 DDX54Q8TDD1 881 aaKnown RBP24.84■■□□□ 1.57
SSBP1-215ENST00000612337 GGNBP2Q9H3C7 697 aa24.84■■□□□ 1.57
SSBP1-215ENST00000612337 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
SSBP1-215ENST00000612337 PAPPAQ13219 1627 aa24.83■■□□□ 1.56
SSBP1-215ENST00000612337 RGPD2P0DJD1 1756 aa24.82■■□□□ 1.56
SSBP1-215ENST00000612337 RRS1Q15050 365 aaKnown RBP24.82■■□□□ 1.56
SSBP1-215ENST00000612337 PTGER2P43116 358 aa24.8■■□□□ 1.56
SSBP1-215ENST00000612337 KIF20BQ96Q89 1820 aa24.79■■□□□ 1.56
SSBP1-215ENST00000612337 ZCRB1Q8TBF4 217 aaKnown RBP24.79■■□□□ 1.56
SSBP1-215ENST00000612337 MEGF6O75095 1541 aa24.78■■□□□ 1.56
SSBP1-215ENST00000612337 ATF5Q9Y2D1 282 aaPredicted RBP24.78■■□□□ 1.56
SSBP1-215ENST00000612337 CLSPNQ9HAW4 1339 aa24.78■■□□□ 1.56
SSBP1-215ENST00000612337 SHANK3Q9BYB0 1731 aa24.78■■□□□ 1.56
SSBP1-215ENST00000612337 NBPF6Q5VWK0 638 aa24.77■■□□□ 1.56
SSBP1-215ENST00000612337 NBPF4Q96M43 638 aa24.77■■□□□ 1.56
SSBP1-215ENST00000612337 MTFR1LQ9H019 292 aa24.77■■□□□ 1.56
SSBP1-215ENST00000612337 LRRC4BQ9NT99 713 aa24.77■■□□□ 1.56
SSBP1-215ENST00000612337 MYOM1P52179 1685 aa24.77■■□□□ 1.56
SSBP1-215ENST00000612337 SMG6Q86US8 1419 aaKnown RBP24.77■■□□□ 1.56
SSBP1-215ENST00000612337 UTRNP46939 3433 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms