RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 BAG6P46379 1132 aa17.26■□□□□ 0.35
FAM228B-207ENST00000611917 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
FAM228B-207ENST00000611917 CRB1P82279 1406 aa17.25■□□□□ 0.35
FAM228B-207ENST00000611917 EXOC5O00471 708 aa17.25■□□□□ 0.35
FAM228B-207ENST00000611917 FYB1O15117 783 aa17.25■□□□□ 0.35
FAM228B-207ENST00000611917 AMPHP49418 695 aa17.25■□□□□ 0.35
FAM228B-207ENST00000611917 DDB1Q16531 1140 aa17.25■□□□□ 0.35
FAM228B-207ENST00000611917 IP6K1Q92551 441 aa17.25■□□□□ 0.35
FAM228B-207ENST00000611917 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
FAM228B-207ENST00000611917 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
FAM228B-207ENST00000611917 SLIT3O75094 1523 aa17.24■□□□□ 0.35
FAM228B-207ENST00000611917 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
FAM228B-207ENST00000611917 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
FAM228B-207ENST00000611917 CRYBG1Q9Y4K1 1723 aa17.22■□□□□ 0.35
FAM228B-207ENST00000611917 GGNBP2Q9H3C7 697 aa17.22■□□□□ 0.35
FAM228B-207ENST00000611917 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
FAM228B-207ENST00000611917 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
FAM228B-207ENST00000611917 ANKRD24Q8TF21 1146 aa17.21■□□□□ 0.35
FAM228B-207ENST00000611917 AKAP12Q02952 1782 aa17.2■□□□□ 0.34
FAM228B-207ENST00000611917 TRIM37O94972 964 aa17.2■□□□□ 0.34
FAM228B-207ENST00000611917 NRAPQ86VF7 1730 aa17.2■□□□□ 0.34
FAM228B-207ENST00000611917 PIK3C2AO00443 1686 aa17.2■□□□□ 0.34
FAM228B-207ENST00000611917 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
FAM228B-207ENST00000611917 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
FAM228B-207ENST00000611917 APBA3O96018 575 aa17.18■□□□□ 0.34
FAM228B-207ENST00000611917 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
FAM228B-207ENST00000611917 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
FAM228B-207ENST00000611917 IL2RBP14784 551 aa17.16■□□□□ 0.34
FAM228B-207ENST00000611917 FBLN1P23142 703 aa17.16■□□□□ 0.34
FAM228B-207ENST00000611917 HOXC9P31274 260 aa17.16■□□□□ 0.34
FAM228B-207ENST00000611917 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
FAM228B-207ENST00000611917 ERBB3P21860 1342 aa17.16■□□□□ 0.34
FAM228B-207ENST00000611917 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
FAM228B-207ENST00000611917 PANK3Q9H999 370 aa17.15■□□□□ 0.34
FAM228B-207ENST00000611917 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
FAM228B-207ENST00000611917 MON2Q7Z3U7 1717 aa17.15■□□□□ 0.34
FAM228B-207ENST00000611917 OVOS2A0A0J9YW53 1432 aa17.14■□□□□ 0.33
FAM228B-207ENST00000611917 OVOS2Q6IE36 1432 aa17.14■□□□□ 0.33
FAM228B-207ENST00000611917 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
FAM228B-207ENST00000611917 NFAT5O94916 1531 aa17.13■□□□□ 0.33
FAM228B-207ENST00000611917 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
FAM228B-207ENST00000611917 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
FAM228B-207ENST00000611917 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
FAM228B-207ENST00000611917 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
FAM228B-207ENST00000611917 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
FAM228B-207ENST00000611917 ABCC6O95255 1503 aa17.11■□□□□ 0.33
FAM228B-207ENST00000611917 COL18A1P39060 1754 aa17.1■□□□□ 0.33
FAM228B-207ENST00000611917 PPM1GO15355 546 aaPredicted RBP17.1■□□□□ 0.33
FAM228B-207ENST00000611917 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
FAM228B-207ENST00000611917 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
FAM228B-207ENST00000611917 CAMKK2Q96RR4 588 aa17.1■□□□□ 0.33
FAM228B-207ENST00000611917 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
FAM228B-207ENST00000611917 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
FAM228B-207ENST00000611917 PLSCR1O15162 318 aa17.08■□□□□ 0.32
FAM228B-207ENST00000611917 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
FAM228B-207ENST00000611917 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
FAM228B-207ENST00000611917 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
FAM228B-207ENST00000611917 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
FAM228B-207ENST00000611917 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
FAM228B-207ENST00000611917 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
FAM228B-207ENST00000611917 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
FAM228B-207ENST00000611917 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
FAM228B-207ENST00000611917 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
FAM228B-207ENST00000611917 INSRP06213 1382 aa17.05■□□□□ 0.32
FAM228B-207ENST00000611917 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
FAM228B-207ENST00000611917 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
FAM228B-207ENST00000611917 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
FAM228B-207ENST00000611917 FLT4P35916 1363 aa17.04■□□□□ 0.32
FAM228B-207ENST00000611917 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
FAM228B-207ENST00000611917 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
FAM228B-207ENST00000611917 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
FAM228B-207ENST00000611917 EMILIN1Q9Y6C2 1016 aa17.04■□□□□ 0.32
FAM228B-207ENST00000611917 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
FAM228B-207ENST00000611917 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
FAM228B-207ENST00000611917 BCL9O00512 1426 aa17.03■□□□□ 0.32
FAM228B-207ENST00000611917 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
FAM228B-207ENST00000611917 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
FAM228B-207ENST00000611917 R3HDM1Q15032 1099 aaKnown RBP17■□□□□ 0.31
FAM228B-207ENST00000611917 NSD2O96028 1365 aa17■□□□□ 0.31
FAM228B-207ENST00000611917 RGPD5Q99666 1765 aa17■□□□□ 0.31
FAM228B-207ENST00000611917 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
FAM228B-207ENST00000611917 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
FAM228B-207ENST00000611917 KCNQ2O43526 872 aa16.99■□□□□ 0.31
FAM228B-207ENST00000611917 USHBP1Q8N6Y0 703 aa16.99■□□□□ 0.31
FAM228B-207ENST00000611917 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
FAM228B-207ENST00000611917 TNS2Q63HR2 1409 aa16.96■□□□□ 0.31
FAM228B-207ENST00000611917 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
FAM228B-207ENST00000611917 EP400Q96L91 3159 aa16.96■□□□□ 0.31
FAM228B-207ENST00000611917 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
FAM228B-207ENST00000611917 PTF1AQ7RTS3 328 aa16.96■□□□□ 0.31
FAM228B-207ENST00000611917 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
FAM228B-207ENST00000611917 EYA1Q99502 592 aa16.96■□□□□ 0.31
FAM228B-207ENST00000611917 LTN1O94822 1766 aa16.96■□□□□ 0.31
FAM228B-207ENST00000611917 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
FAM228B-207ENST00000611917 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
FAM228B-207ENST00000611917 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
FAM228B-207ENST00000611917 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
FAM228B-207ENST00000611917 PROM2Q8N271 834 aa16.94■□□□□ 0.3
FAM228B-207ENST00000611917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.3
FAM228B-207ENST00000611917 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms