RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 DDB1Q16531 1140 aa19.09■□□□□ 0.65
HMGB1P24-201ENST00000611897 SBF2Q86WG5 1849 aa19.08■□□□□ 0.64
HMGB1P24-201ENST00000611897 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
HMGB1P24-201ENST00000611897 PEAK1Q9H792 1746 aa19.07■□□□□ 0.64
HMGB1P24-201ENST00000611897 KTN1Q86UP2 1357 aaKnown RBP19.06■□□□□ 0.64
HMGB1P24-201ENST00000611897 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
HMGB1P24-201ENST00000611897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
HMGB1P24-201ENST00000611897 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
HMGB1P24-201ENST00000611897 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
HMGB1P24-201ENST00000611897 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
HMGB1P24-201ENST00000611897 TTC21AQ8NDW8 1320 aa19.03■□□□□ 0.64
HMGB1P24-201ENST00000611897 ARHGEF25Q86VW2 580 aa19.03■□□□□ 0.64
HMGB1P24-201ENST00000611897 PPP1R1BQ9UD71 204 aaPredicted RBP19.03■□□□□ 0.64
HMGB1P24-201ENST00000611897 NFAT5O94916 1531 aa19.03■□□□□ 0.64
HMGB1P24-201ENST00000611897 C11orf95C9JLR9 678 aaPredicted RBP19.02■□□□□ 0.64
HMGB1P24-201ENST00000611897 PTF1AQ7RTS3 328 aa19.02■□□□□ 0.64
HMGB1P24-201ENST00000611897 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
HMGB1P24-201ENST00000611897 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
HMGB1P24-201ENST00000611897 RGPD3A6NKT7 1758 aaPredicted RBP19.01■□□□□ 0.63
HMGB1P24-201ENST00000611897 RGPD4Q7Z3J3 1758 aa19.01■□□□□ 0.63
HMGB1P24-201ENST00000611897 MARCH10Q8NA82 808 aaPredicted RBP19■□□□□ 0.63
HMGB1P24-201ENST00000611897 LTN1O94822 1766 aa18.99■□□□□ 0.63
HMGB1P24-201ENST00000611897 BCL11BQ9C0K0 894 aaPredicted RBP18.99■□□□□ 0.63
HMGB1P24-201ENST00000611897 SPON1Q9HCB6 807 aa18.99■□□□□ 0.63
HMGB1P24-201ENST00000611897 ANO8Q9HCE9 1232 aaPredicted RBP18.99■□□□□ 0.63
HMGB1P24-201ENST00000611897 KAT6BQ8WYB5 2073 aa18.99■□□□□ 0.63
HMGB1P24-201ENST00000611897 NME9Q86XW9 330 aa18.98■□□□□ 0.63
HMGB1P24-201ENST00000611897 CDCA7Q9BWT1 371 aaPredicted RBP18.98■□□□□ 0.63
HMGB1P24-201ENST00000611897 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
HMGB1P24-201ENST00000611897 TONSLQ96HA7 1378 aa18.97■□□□□ 0.63
HMGB1P24-201ENST00000611897 EXOC5O00471 708 aa18.96■□□□□ 0.63
HMGB1P24-201ENST00000611897 KCNQ2O43526 872 aa18.96■□□□□ 0.63
HMGB1P24-201ENST00000611897 NLRP2Q9NX02 1062 aa18.96■□□□□ 0.63
HMGB1P24-201ENST00000611897 TNS2Q63HR2 1409 aa18.96■□□□□ 0.63
HMGB1P24-201ENST00000611897 CCDC7Q96M83 1385 aa18.95■□□□□ 0.62
HMGB1P24-201ENST00000611897 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
HMGB1P24-201ENST00000611897 SBNO2Q9Y2G9 1366 aa18.94■□□□□ 0.62
HMGB1P24-201ENST00000611897 PLSCR1O15162 318 aa18.94■□□□□ 0.62
HMGB1P24-201ENST00000611897 ABCC6O95255 1503 aa18.94■□□□□ 0.62
HMGB1P24-201ENST00000611897 CD163L1Q9NR16 1453 aa18.93■□□□□ 0.62
HMGB1P24-201ENST00000611897 ACSBG1Q96GR2 724 aa18.93■□□□□ 0.62
HMGB1P24-201ENST00000611897 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
HMGB1P24-201ENST00000611897 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
HMGB1P24-201ENST00000611897 CASZ1Q86V15 1759 aa18.92■□□□□ 0.62
HMGB1P24-201ENST00000611897 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
HMGB1P24-201ENST00000611897 PDGFDQ9GZP0 370 aaPredicted RBP18.92■□□□□ 0.62
HMGB1P24-201ENST00000611897 ERBB3P21860 1342 aa18.92■□□□□ 0.62
HMGB1P24-201ENST00000611897 TXNRD1Q16881 649 aa18.91■□□□□ 0.62
HMGB1P24-201ENST00000611897 NHSQ6T4R5 1651 aa18.91■□□□□ 0.62
HMGB1P24-201ENST00000611897 USP31Q70CQ4 1352 aa18.91■□□□□ 0.62
HMGB1P24-201ENST00000611897 EDC4Q6P2E9 1401 aaKnown RBP18.91■□□□□ 0.62
HMGB1P24-201ENST00000611897 ANKRD24Q8TF21 1146 aa18.9■□□□□ 0.62
HMGB1P24-201ENST00000611897 STK32BQ9NY57 414 aa18.9■□□□□ 0.62
HMGB1P24-201ENST00000611897 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
HMGB1P24-201ENST00000611897 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
HMGB1P24-201ENST00000611897 YY1P25490 414 aa18.89■□□□□ 0.61
HMGB1P24-201ENST00000611897 PROM2Q8N271 834 aa18.89■□□□□ 0.61
HMGB1P24-201ENST00000611897 TERF2IPQ9NYB0 399 aa18.89■□□□□ 0.61
HMGB1P24-201ENST00000611897 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
HMGB1P24-201ENST00000611897 BCL9O00512 1426 aa18.89■□□□□ 0.61
HMGB1P24-201ENST00000611897 IL2RBP14784 551 aa18.88■□□□□ 0.61
HMGB1P24-201ENST00000611897 LTV1Q96GA3 475 aaPredicted RBP18.88■□□□□ 0.61
HMGB1P24-201ENST00000611897 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
HMGB1P24-201ENST00000611897 MYOM1P52179 1685 aa18.88■□□□□ 0.61
HMGB1P24-201ENST00000611897 BTAF1O14981 1849 aa18.86■□□□□ 0.61
HMGB1P24-201ENST00000611897 SLC15A2Q16348 729 aa18.83■□□□□ 0.6
HMGB1P24-201ENST00000611897 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
HMGB1P24-201ENST00000611897 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
HMGB1P24-201ENST00000611897 DDX54Q8TDD1 881 aaKnown RBP18.81■□□□□ 0.6
HMGB1P24-201ENST00000611897 COG3Q96JB2 828 aa18.8■□□□□ 0.6
HMGB1P24-201ENST00000611897 RGPD2P0DJD1 1756 aa18.8■□□□□ 0.6
HMGB1P24-201ENST00000611897 AMPHP49418 695 aa18.79■□□□□ 0.6
HMGB1P24-201ENST00000611897 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
HMGB1P24-201ENST00000611897 FBLN1P23142 703 aa18.78■□□□□ 0.6
HMGB1P24-201ENST00000611897 PTGER2P43116 358 aa18.78■□□□□ 0.6
HMGB1P24-201ENST00000611897 IP6K1Q92551 441 aa18.78■□□□□ 0.6
HMGB1P24-201ENST00000611897 TESK2Q96S53 571 aa18.78■□□□□ 0.6
HMGB1P24-201ENST00000611897 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
HMGB1P24-201ENST00000611897 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.6
HMGB1P24-201ENST00000611897 MAP3K19Q56UN5 1328 aa18.77■□□□□ 0.6
HMGB1P24-201ENST00000611897 MTFR1LQ9H019 292 aa18.77■□□□□ 0.6
HMGB1P24-201ENST00000611897 ZNF827Q17R98 1081 aa18.76■□□□□ 0.59
HMGB1P24-201ENST00000611897 FHDC1Q9C0D6 1143 aaPredicted RBP18.76■□□□□ 0.59
HMGB1P24-201ENST00000611897 HOXC9P31274 260 aa18.75■□□□□ 0.59
HMGB1P24-201ENST00000611897 PUS7Q96PZ0 661 aaKnown RBP18.75■□□□□ 0.59
HMGB1P24-201ENST00000611897 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
HMGB1P24-201ENST00000611897 ANKRD36BQ8N2N9 1353 aa18.73■□□□□ 0.59
HMGB1P24-201ENST00000611897 KCNQ4P56696 695 aa18.73■□□□□ 0.59
HMGB1P24-201ENST00000611897 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
HMGB1P24-201ENST00000611897 GGNBP2Q9H3C7 697 aa18.73■□□□□ 0.59
HMGB1P24-201ENST00000611897 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
HMGB1P24-201ENST00000611897 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
HMGB1P24-201ENST00000611897 MEGF6O75095 1541 aa18.72■□□□□ 0.59
HMGB1P24-201ENST00000611897 SHANK3Q9BYB0 1731 aa18.71■□□□□ 0.59
HMGB1P24-201ENST00000611897 USP47Q96K76 1375 aa18.71■□□□□ 0.59
HMGB1P24-201ENST00000611897 ARXQ96QS3 562 aa18.71■□□□□ 0.59
HMGB1P24-201ENST00000611897 SYT17Q9BSW7 474 aa18.71■□□□□ 0.59
HMGB1P24-201ENST00000611897 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
HMGB1P24-201ENST00000611897 PRIM1P49642 420 aaKnown RBP18.7■□□□□ 0.58
HMGB1P24-201ENST00000611897 TUBGCP6Q96RT7 1819 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms