RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
CLTCL1-207ENST00000611723 COL22A1Q8NFW1 1626 aaPredicted RBP21.46■■□□□ 1.03
CLTCL1-207ENST00000611723 NGLY1Q96IV0 654 aa21.45■■□□□ 1.02
CLTCL1-207ENST00000611723 CPDO75976 1380 aa21.45■■□□□ 1.02
CLTCL1-207ENST00000611723 PNISRQ8TF01 805 aaKnown RBP21.44■■□□□ 1.02
CLTCL1-207ENST00000611723 PHRF1Q9P1Y6 1649 aaKnown RBP21.44■■□□□ 1.02
CLTCL1-207ENST00000611723 IP6K1Q92551 441 aa21.43■■□□□ 1.02
CLTCL1-207ENST00000611723 RTL1A6NKG5 1358 aa21.42■■□□□ 1.02
CLTCL1-207ENST00000611723 PPM1GO15355 546 aaPredicted RBP21.42■■□□□ 1.02
CLTCL1-207ENST00000611723 FLT4P35916 1363 aa21.42■■□□□ 1.02
CLTCL1-207ENST00000611723 AMPHP49418 695 aa21.42■■□□□ 1.02
CLTCL1-207ENST00000611723 PLEKHG5O94827 1062 aa21.41■■□□□ 1.02
CLTCL1-207ENST00000611723 HOXC9P31274 260 aa21.41■■□□□ 1.02
CLTCL1-207ENST00000611723 ZC3H6P61129 1189 aaKnown RBP21.41■■□□□ 1.02
CLTCL1-207ENST00000611723 COL3A1P02461 1466 aaPredicted RBP21.4■■□□□ 1.02
CLTCL1-207ENST00000611723 PEAK1Q9H792 1746 aa21.4■■□□□ 1.02
CLTCL1-207ENST00000611723 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
CLTCL1-207ENST00000611723 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
CLTCL1-207ENST00000611723 ABCA3Q99758 1704 aa21.38■■□□□ 1.01
CLTCL1-207ENST00000611723 IL13P35225 146 aa21.38■■□□□ 1.01
CLTCL1-207ENST00000611723 HAP1P54257 671 aaPredicted RBP21.38■■□□□ 1.01
CLTCL1-207ENST00000611723 USP21Q9UK80 565 aa21.38■■□□□ 1.01
CLTCL1-207ENST00000611723 KIAA0232Q92628 1395 aa21.37■■□□□ 1.01
CLTCL1-207ENST00000611723 LTN1O94822 1766 aa21.37■■□□□ 1.01
CLTCL1-207ENST00000611723 ABCC6O95255 1503 aa21.36■■□□□ 1.01
CLTCL1-207ENST00000611723 NUDCQ9Y266 331 aa21.36■■□□□ 1.01
CLTCL1-207ENST00000611723 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
CLTCL1-207ENST00000611723 BLMP54132 1417 aaPredicted RBP21.35■■□□□ 1.01
CLTCL1-207ENST00000611723 COL18A1P39060 1754 aa21.35■■□□□ 1.01
CLTCL1-207ENST00000611723 PRDM11Q9NQV5 511 aa21.34■■□□□ 1.01
CLTCL1-207ENST00000611723 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
CLTCL1-207ENST00000611723 ATRNO75882 1429 aa21.33■■□□□ 1.01
CLTCL1-207ENST00000611723 FAM83GA6ND36 823 aa21.33■■□□□ 1.01
CLTCL1-207ENST00000611723 TRPC5Q9UL62 973 aaPredicted RBP21.33■■□□□ 1.01
CLTCL1-207ENST00000611723 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
CLTCL1-207ENST00000611723 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
CLTCL1-207ENST00000611723 CHRNA2Q15822 529 aa21.32■■□□□ 1
CLTCL1-207ENST00000611723 FAM9BQ8IZU0 186 aa21.31■■□□□ 1
CLTCL1-207ENST00000611723 FNBP4Q8N3X1 1017 aaPredicted RBP21.31■■□□□ 1
CLTCL1-207ENST00000611723 ADAMTS8Q9UP79 889 aa21.31■■□□□ 1
CLTCL1-207ENST00000611723 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
CLTCL1-207ENST00000611723 LMO7Q8WWI1 1683 aa21.28■■□□□ 1
CLTCL1-207ENST00000611723 U2SURPO15042 1029 aaKnown RBP21.27■■□□□ 1
CLTCL1-207ENST00000611723 U2AF1L5P0DN76 240 aaPredicted RBP21.27■■□□□ 1
CLTCL1-207ENST00000611723 U2AF1Q01081 240 aaKnown RBP eCLIP21.27■■□□□ 1
CLTCL1-207ENST00000611723 EYA1Q99502 592 aa21.27■■□□□ 1
CLTCL1-207ENST00000611723 ERBB3P21860 1342 aa21.27■□□□□ 0.99
CLTCL1-207ENST00000611723 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
CLTCL1-207ENST00000611723 CAMTA1Q9Y6Y1 1673 aa21.26■□□□□ 0.99
CLTCL1-207ENST00000611723 FCHSD2O94868 740 aa21.26■□□□□ 0.99
CLTCL1-207ENST00000611723 IGSF1Q8N6C5 1336 aa21.26■□□□□ 0.99
CLTCL1-207ENST00000611723 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
CLTCL1-207ENST00000611723 LTV1Q96GA3 475 aaPredicted RBP21.25■□□□□ 0.99
CLTCL1-207ENST00000611723 SRCAPQ6ZRS2 3230 aa21.25■□□□□ 0.99
CLTCL1-207ENST00000611723 RGPD5Q99666 1765 aa21.24■□□□□ 0.99
CLTCL1-207ENST00000611723 PNNQ9H307 717 aaKnown RBP21.24■□□□□ 0.99
CLTCL1-207ENST00000611723 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
CLTCL1-207ENST00000611723 COL5A2P05997 1499 aaPredicted RBP21.22■□□□□ 0.99
CLTCL1-207ENST00000611723 NBPF6Q5VWK0 638 aa21.22■□□□□ 0.99
CLTCL1-207ENST00000611723 NBPF4Q96M43 638 aa21.22■□□□□ 0.99
CLTCL1-207ENST00000611723 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
CLTCL1-207ENST00000611723 KDRP35968 1356 aa21.22■□□□□ 0.99
CLTCL1-207ENST00000611723 NCAPD2Q15021 1401 aa21.21■□□□□ 0.99
CLTCL1-207ENST00000611723 SULT6B1Q6IMI4 303 aa21.21■□□□□ 0.99
CLTCL1-207ENST00000611723 PLEKHF1Q96S99 279 aa21.21■□□□□ 0.99
CLTCL1-207ENST00000611723 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
CLTCL1-207ENST00000611723 WDR17Q8IZU2 1322 aa21.21■□□□□ 0.99
CLTCL1-207ENST00000611723 EVA1CP58658 441 aa21.2■□□□□ 0.98
CLTCL1-207ENST00000611723 SLIT2O94813 1529 aa21.19■□□□□ 0.98
CLTCL1-207ENST00000611723 HMOX1P09601 288 aa21.19■□□□□ 0.98
CLTCL1-207ENST00000611723 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
CLTCL1-207ENST00000611723 GJD4Q96KN9 370 aaPredicted RBP21.19■□□□□ 0.98
CLTCL1-207ENST00000611723 CSB-PGBD3P0DP91 1061 aa21.18■□□□□ 0.98
CLTCL1-207ENST00000611723 AEBP1Q8IUX7 1158 aa21.18■□□□□ 0.98
CLTCL1-207ENST00000611723 CARD10Q9BWT7 1032 aa21.18■□□□□ 0.98
CLTCL1-207ENST00000611723 GLI3P10071 1580 aa21.18■□□□□ 0.98
CLTCL1-207ENST00000611723 BRWD3Q6RI45 1802 aa21.16■□□□□ 0.98
CLTCL1-207ENST00000611723 FAM208AQ9UK61 1670 aaKnown RBP21.16■□□□□ 0.98
CLTCL1-207ENST00000611723 PRKAR2BP31323 418 aa21.16■□□□□ 0.98
CLTCL1-207ENST00000611723 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
CLTCL1-207ENST00000611723 NLRP2Q9NX02 1062 aa21.16■□□□□ 0.98
CLTCL1-207ENST00000611723 NWD2Q9ULI1 1742 aa21.15■□□□□ 0.98
CLTCL1-207ENST00000611723 LARP1Q6PKG0 1096 aaKnown RBP21.15■□□□□ 0.98
CLTCL1-207ENST00000611723 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
CLTCL1-207ENST00000611723 CCDC146Q8IYE0 955 aa21.15■□□□□ 0.98
CLTCL1-207ENST00000611723 STRN4Q9NRL3 753 aa21.15■□□□□ 0.98
CLTCL1-207ENST00000611723 EP400Q96L91 3159 aa21.15■□□□□ 0.98
CLTCL1-207ENST00000611723 NCBP3Q53F19 620 aaKnown RBP21.14■□□□□ 0.97
CLTCL1-207ENST00000611723 TOM1L2Q6ZVM7 507 aa21.14■□□□□ 0.97
CLTCL1-207ENST00000611723 UNC5CLQ8IV45 518 aa21.14■□□□□ 0.97
CLTCL1-207ENST00000611723 RGPD2P0DJD1 1756 aa21.14■□□□□ 0.97
CLTCL1-207ENST00000611723 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.14■□□□□ 0.97
CLTCL1-207ENST00000611723 PLCH1Q4KWH8 1693 aa21.14■□□□□ 0.97
CLTCL1-207ENST00000611723 CRB1P82279 1406 aa21.13■□□□□ 0.97
CLTCL1-207ENST00000611723 NGEFQ8N5V2 710 aa21.13■□□□□ 0.97
CLTCL1-207ENST00000611723 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
CLTCL1-207ENST00000611723 PHACTR3Q96KR7 559 aa21.12■□□□□ 0.97
CLTCL1-207ENST00000611723 PLEKHG2Q9H7P9 1386 aa21.11■□□□□ 0.97
CLTCL1-207ENST00000611723 APAF1O14727 1248 aa21.11■□□□□ 0.97
CLTCL1-207ENST00000611723 NEFMP07197 916 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms