RNA–Protein interactions for RNA: ENST00000611228.4

UBE2U-206, Transcript of ubiquitin conjugating enzyme E2 U, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBE2U, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2U-206ENST00000611228 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
UBE2U-206ENST00000611228 SRCAPQ6ZRS2 3230 aa12.01□□□□□ -0.49
UBE2U-206ENST00000611228 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
UBE2U-206ENST00000611228 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
UBE2U-206ENST00000611228 POTEHQ6S545 545 aa12□□□□□ -0.49
UBE2U-206ENST00000611228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
UBE2U-206ENST00000611228 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
UBE2U-206ENST00000611228 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
UBE2U-206ENST00000611228 ATN1P54259 1190 aaPredicted RBP11.99□□□□□ -0.49
UBE2U-206ENST00000611228 POGKQ9P215 609 aa11.99□□□□□ -0.49
UBE2U-206ENST00000611228 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
UBE2U-206ENST00000611228 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
UBE2U-206ENST00000611228 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
UBE2U-206ENST00000611228 VPS72Q15906 364 aa11.98□□□□□ -0.49
UBE2U-206ENST00000611228 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
UBE2U-206ENST00000611228 SAFB2Q14151 953 aaKnown RBP eCLIP11.97□□□□□ -0.49
UBE2U-206ENST00000611228 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
UBE2U-206ENST00000611228 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
UBE2U-206ENST00000611228 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
UBE2U-206ENST00000611228 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
UBE2U-206ENST00000611228 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.49
UBE2U-206ENST00000611228 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
UBE2U-206ENST00000611228 NRAPQ86VF7 1730 aa11.96□□□□□ -0.49
UBE2U-206ENST00000611228 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.49
UBE2U-206ENST00000611228 GPRASP1Q5JY77 1395 aa11.96□□□□□ -0.5
UBE2U-206ENST00000611228 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.5
UBE2U-206ENST00000611228 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.5
UBE2U-206ENST00000611228 STAC3Q96MF2 364 aa11.96□□□□□ -0.5
UBE2U-206ENST00000611228 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.5
UBE2U-206ENST00000611228 GABBR2O75899 941 aa11.95□□□□□ -0.5
UBE2U-206ENST00000611228 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
UBE2U-206ENST00000611228 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
UBE2U-206ENST00000611228 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
UBE2U-206ENST00000611228 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
UBE2U-206ENST00000611228 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
UBE2U-206ENST00000611228 ARHGEF28Q8N1W1 1705 aaKnown RBP11.94□□□□□ -0.5
UBE2U-206ENST00000611228 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
UBE2U-206ENST00000611228 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
UBE2U-206ENST00000611228 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
UBE2U-206ENST00000611228 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
UBE2U-206ENST00000611228 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
UBE2U-206ENST00000611228 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
UBE2U-206ENST00000611228 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
UBE2U-206ENST00000611228 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
UBE2U-206ENST00000611228 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
UBE2U-206ENST00000611228 PRR36Q9H6K5 1346 aa11.91□□□□□ -0.5
UBE2U-206ENST00000611228 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
UBE2U-206ENST00000611228 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
UBE2U-206ENST00000611228 IER5LQ5T953 404 aa11.91□□□□□ -0.5
UBE2U-206ENST00000611228 RGPD1P0DJD0 1748 aa11.91□□□□□ -0.5
UBE2U-206ENST00000611228 A0A0G2JS52 829 aa11.9□□□□□ -0.5
UBE2U-206ENST00000611228 MYT1Q01538 1121 aa11.9□□□□□ -0.5
UBE2U-206ENST00000611228 MFSD10Q14728 455 aa11.9□□□□□ -0.5
UBE2U-206ENST00000611228 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
UBE2U-206ENST00000611228 BTG4Q9NY30 223 aa11.9□□□□□ -0.5
UBE2U-206ENST00000611228 DEFB132Q7Z7B7 95 aa11.89□□□□□ -0.51
UBE2U-206ENST00000611228 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
UBE2U-206ENST00000611228 LRP5O75197 1615 aa11.89□□□□□ -0.51
UBE2U-206ENST00000611228 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
UBE2U-206ENST00000611228 ATP7BP35670 1465 aa11.89□□□□□ -0.51
UBE2U-206ENST00000611228 HRCP23327 699 aa11.88□□□□□ -0.51
UBE2U-206ENST00000611228 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
UBE2U-206ENST00000611228 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
UBE2U-206ENST00000611228 BAG6P46379 1132 aa11.88□□□□□ -0.51
UBE2U-206ENST00000611228 FAM98CQ17RN3 349 aaKnown RBP11.88□□□□□ -0.51
UBE2U-206ENST00000611228 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
UBE2U-206ENST00000611228 PDE4AP27815 886 aa11.87□□□□□ -0.51
UBE2U-206ENST00000611228 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
UBE2U-206ENST00000611228 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
UBE2U-206ENST00000611228 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
UBE2U-206ENST00000611228 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
UBE2U-206ENST00000611228 E2F4Q16254 413 aa11.85□□□□□ -0.51
UBE2U-206ENST00000611228 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
UBE2U-206ENST00000611228 NUDT16Q96DE0 195 aaKnown RBP11.85□□□□□ -0.51
UBE2U-206ENST00000611228 OCEL1Q9H607 264 aa11.85□□□□□ -0.51
UBE2U-206ENST00000611228 TNS1Q9HBL0 1735 aaKnown RBP11.85□□□□□ -0.51
UBE2U-206ENST00000611228 DISP2A7MBM2 1401 aa11.84□□□□□ -0.51
UBE2U-206ENST00000611228 DDX27Q96GQ7 796 aaKnown RBP11.84□□□□□ -0.51
UBE2U-206ENST00000611228 POLR3AO14802 1390 aaPredicted RBP11.83□□□□□ -0.52
UBE2U-206ENST00000611228 KIAA0232Q92628 1395 aa11.83□□□□□ -0.52
UBE2U-206ENST00000611228 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
UBE2U-206ENST00000611228 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
UBE2U-206ENST00000611228 CDK19Q9BWU1 502 aa11.82□□□□□ -0.52
UBE2U-206ENST00000611228 SPATA31A1Q5TZJ5 1347 aa11.82□□□□□ -0.52
UBE2U-206ENST00000611228 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
UBE2U-206ENST00000611228 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
UBE2U-206ENST00000611228 PLCG2P16885 1265 aa11.8□□□□□ -0.52
UBE2U-206ENST00000611228 ACEP12821 1306 aa11.8□□□□□ -0.52
UBE2U-206ENST00000611228 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
UBE2U-206ENST00000611228 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
UBE2U-206ENST00000611228 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 LMO7Q8WWI1 1683 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 PSDA5PKW4 1024 aaPredicted RBP11.79□□□□□ -0.52
UBE2U-206ENST00000611228 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
UBE2U-206ENST00000611228 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
UBE2U-206ENST00000611228 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms