RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
SMCHD1-213ENST00000609587 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
SMCHD1-213ENST00000609587 FIGNL2A6NMB9 653 aa9.35□□□□□ -0.91
SMCHD1-213ENST00000609587 PDE4DQ08499 809 aa9.35□□□□□ -0.91
SMCHD1-213ENST00000609587 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
SMCHD1-213ENST00000609587 SLC35F4A4IF30 521 aa9.33□□□□□ -0.92
SMCHD1-213ENST00000609587 SPINT1O43278 529 aa9.33□□□□□ -0.92
SMCHD1-213ENST00000609587 CBLBQ13191 982 aa9.33□□□□□ -0.92
SMCHD1-213ENST00000609587 PRPF38BQ5VTL8 546 aaKnown RBP9.33□□□□□ -0.92
SMCHD1-213ENST00000609587 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
SMCHD1-213ENST00000609587 IGHA1P01876 353 aa9.32□□□□□ -0.92
SMCHD1-213ENST00000609587 ITGA6P23229 1130 aa9.32□□□□□ -0.92
SMCHD1-213ENST00000609587 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
SMCHD1-213ENST00000609587 Q6ZVU0 165 aa9.32□□□□□ -0.92
SMCHD1-213ENST00000609587 CSPP1Q1MSJ5 1256 aa9.31□□□□□ -0.92
SMCHD1-213ENST00000609587 CDC14CA4D256 554 aa9.3□□□□□ -0.92
SMCHD1-213ENST00000609587 DIXDC1Q155Q3 683 aa9.3□□□□□ -0.92
SMCHD1-213ENST00000609587 PPP1R26Q5T8A7 1209 aaPredicted RBP9.3□□□□□ -0.92
SMCHD1-213ENST00000609587 KANK3Q6NY19 840 aa9.3□□□□□ -0.92
SMCHD1-213ENST00000609587 VWA5B2Q8N398 1253 aa9.3□□□□□ -0.92
SMCHD1-213ENST00000609587 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
SMCHD1-213ENST00000609587 QPCTQ16769 361 aa9.29□□□□□ -0.92
SMCHD1-213ENST00000609587 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
SMCHD1-213ENST00000609587 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
SMCHD1-213ENST00000609587 TSC1Q92574 1164 aa9.29□□□□□ -0.92
SMCHD1-213ENST00000609587 FOXK2Q01167 660 aa9.28□□□□□ -0.92
SMCHD1-213ENST00000609587 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
SMCHD1-213ENST00000609587 XP32Q5T750 250 aa9.28□□□□□ -0.92
SMCHD1-213ENST00000609587 CTSOP43234 321 aaPredicted RBP9.27□□□□□ -0.93
SMCHD1-213ENST00000609587 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-213ENST00000609587 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.93
SMCHD1-213ENST00000609587 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
SMCHD1-213ENST00000609587 ADAMTS2O95450 1211 aa9.26□□□□□ -0.93
SMCHD1-213ENST00000609587 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
SMCHD1-213ENST00000609587 PGPEP1Q9NXJ5 209 aa9.26□□□□□ -0.93
SMCHD1-213ENST00000609587 BRPF1P55201 1214 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-213ENST00000609587 LYPD4Q6UWN0 246 aa9.25□□□□□ -0.93
SMCHD1-213ENST00000609587 SCARF2Q96GP6 870 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-213ENST00000609587 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
SMCHD1-213ENST00000609587 INSM2Q96T92 566 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-213ENST00000609587 NEUROD2Q15784 382 aa9.24□□□□□ -0.93
SMCHD1-213ENST00000609587 RNF217Q8TC41 542 aa9.24□□□□□ -0.93
SMCHD1-213ENST00000609587 GAS6Q14393 721 aa9.23□□□□□ -0.93
SMCHD1-213ENST00000609587 LILRB3O75022 631 aa9.22□□□□□ -0.93
SMCHD1-213ENST00000609587 RELBQ01201 579 aa9.22□□□□□ -0.93
SMCHD1-213ENST00000609587 MYSM1Q5VVJ2 828 aa9.22□□□□□ -0.93
SMCHD1-213ENST00000609587 ITGB2P05107 769 aa9.21□□□□□ -0.94
SMCHD1-213ENST00000609587 GPKOWQ92917 476 aaPredicted RBP eCLIP9.21□□□□□ -0.94
SMCHD1-213ENST00000609587 KCTD15Q96SI1 283 aaPredicted RBP9.21□□□□□ -0.94
SMCHD1-213ENST00000609587 KDM4CQ9H3R0 1056 aa9.21□□□□□ -0.94
SMCHD1-213ENST00000609587 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 ADAM23O75077 832 aa9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 SRSF11Q05519 484 aaKnown RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 GPBP1L1Q9HC44 474 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-213ENST00000609587 CELA2BP08218 269 aaPredicted RBP9.19□□□□□ -0.94
SMCHD1-213ENST00000609587 TUSC1Q2TAM9 212 aa9.19□□□□□ -0.94
SMCHD1-213ENST00000609587 PLA2G4EQ3MJ16 856 aa9.19□□□□□ -0.94
SMCHD1-213ENST00000609587 RTL5Q5HYW3 569 aaPredicted RBP9.19□□□□□ -0.94
SMCHD1-213ENST00000609587 INTS6LQ5JSJ4 861 aaKnown RBP9.19□□□□□ -0.94
SMCHD1-213ENST00000609587 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
SMCHD1-213ENST00000609587 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
SMCHD1-213ENST00000609587 FOXD4L5Q5VV16 416 aaPredicted RBP9.18□□□□□ -0.94
SMCHD1-213ENST00000609587 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
SMCHD1-213ENST00000609587 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
SMCHD1-213ENST00000609587 ARHGAP9Q9BRR9 750 aa9.17□□□□□ -0.94
SMCHD1-213ENST00000609587 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
SMCHD1-213ENST00000609587 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
SMCHD1-213ENST00000609587 ZNF395Q9H8N7 513 aaPredicted RBP9.16□□□□□ -0.94
SMCHD1-213ENST00000609587 MSTNO14793 375 aa9.15□□□□□ -0.94
SMCHD1-213ENST00000609587 PROCP04070 461 aa9.15□□□□□ -0.94
SMCHD1-213ENST00000609587 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
SMCHD1-213ENST00000609587 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
SMCHD1-213ENST00000609587 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
SMCHD1-213ENST00000609587 OCSTAMPQ9BR26 566 aa9.14□□□□□ -0.95
SMCHD1-213ENST00000609587 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
SMCHD1-213ENST00000609587 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
SMCHD1-213ENST00000609587 CNTNAP5Q8WYK1 1306 aa9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 ADH1AP07327 375 aa9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 KDF1Q8NAX2 398 aaPredicted RBP9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 ZNF837Q96EG3 531 aaPredicted RBP9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
SMCHD1-213ENST00000609587 CLK2P49760 499 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-213ENST00000609587 KRTAP4-8Q9BYQ9 185 aa9.1□□□□□ -0.95
SMCHD1-213ENST00000609587 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
SMCHD1-213ENST00000609587 PHF20L1A8MW92 1017 aa9.09□□□□□ -0.95
SMCHD1-213ENST00000609587 LILRA1O75019 489 aa9.09□□□□□ -0.95
SMCHD1-213ENST00000609587 CTDSPL2Q05D32 466 aa9.09□□□□□ -0.95
SMCHD1-213ENST00000609587 ZBTB33Q86T24 672 aa9.09□□□□□ -0.95
SMCHD1-213ENST00000609587 ENAMQ9NRM1 1142 aa9.09□□□□□ -0.95
SMCHD1-213ENST00000609587 GPR25O00155 361 aa9.08□□□□□ -0.96
SMCHD1-213ENST00000609587 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
SMCHD1-213ENST00000609587 IGF1RP08069 1367 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms