RNA–Protein interactions for RNA: ENST00000609252.1

LINC00658-207, long intergenic non-protein coding RNA 658, humanhuman

TSL 5

Gene LINC00658, Length 638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00658-207ENST00000609252 ATRNO75882 1429 aa11.05□□□□□ -0.64
LINC00658-207ENST00000609252 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
LINC00658-207ENST00000609252 MYT1Q01538 1121 aa11.05□□□□□ -0.64
LINC00658-207ENST00000609252 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
LINC00658-207ENST00000609252 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
LINC00658-207ENST00000609252 FBLN1P23142 703 aa11.04□□□□□ -0.64
LINC00658-207ENST00000609252 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
LINC00658-207ENST00000609252 AMPHP49418 695 aa11.04□□□□□ -0.64
LINC00658-207ENST00000609252 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
LINC00658-207ENST00000609252 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
LINC00658-207ENST00000609252 RRS1Q15050 365 aaKnown RBP11.03□□□□□ -0.64
LINC00658-207ENST00000609252 VPS72Q15906 364 aa11.03□□□□□ -0.64
LINC00658-207ENST00000609252 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
LINC00658-207ENST00000609252 GLI3P10071 1580 aa11.03□□□□□ -0.64
LINC00658-207ENST00000609252 COL5A2P05997 1499 aaPredicted RBP11.02□□□□□ -0.65
LINC00658-207ENST00000609252 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.65
LINC00658-207ENST00000609252 MORC1Q86VD1 984 aa11.02□□□□□ -0.65
LINC00658-207ENST00000609252 LTV1Q96GA3 475 aaPredicted RBP11.02□□□□□ -0.65
LINC00658-207ENST00000609252 RGPD2P0DJD1 1756 aa11.02□□□□□ -0.65
LINC00658-207ENST00000609252 BRWD3Q6RI45 1802 aa11.02□□□□□ -0.65
LINC00658-207ENST00000609252 NSD2O96028 1365 aa11.02□□□□□ -0.65
LINC00658-207ENST00000609252 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
LINC00658-207ENST00000609252 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
LINC00658-207ENST00000609252 TOM1L2Q6ZVM7 507 aa11.01□□□□□ -0.65
LINC00658-207ENST00000609252 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
LINC00658-207ENST00000609252 MAP3K19Q56UN5 1328 aa11.01□□□□□ -0.65
LINC00658-207ENST00000609252 ABCC6O95255 1503 aa11□□□□□ -0.65
LINC00658-207ENST00000609252 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
LINC00658-207ENST00000609252 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
LINC00658-207ENST00000609252 SPATA31A5Q5VU36 1347 aa11□□□□□ -0.65
LINC00658-207ENST00000609252 SPATA31A7Q8IWB4 1347 aa11□□□□□ -0.65
LINC00658-207ENST00000609252 RGS12O14924 1447 aa11□□□□□ -0.65
LINC00658-207ENST00000609252 PEAK1Q9H792 1746 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
LINC00658-207ENST00000609252 ANKRD24Q8TF21 1146 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 IP6K1Q92551 441 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 WNK3Q9BYP7 1800 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 SPATA31A1Q5TZJ5 1347 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 WDR17Q8IZU2 1322 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 CRB1P82279 1406 aa10.99□□□□□ -0.65
LINC00658-207ENST00000609252 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
LINC00658-207ENST00000609252 HOXC9P31274 260 aa10.98□□□□□ -0.65
LINC00658-207ENST00000609252 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
LINC00658-207ENST00000609252 NLRP2Q9NX02 1062 aa10.98□□□□□ -0.65
LINC00658-207ENST00000609252 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
LINC00658-207ENST00000609252 BLMP54132 1417 aaPredicted RBP10.98□□□□□ -0.65
LINC00658-207ENST00000609252 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
LINC00658-207ENST00000609252 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
LINC00658-207ENST00000609252 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
LINC00658-207ENST00000609252 TCP11L2Q8N4U5 519 aa10.97□□□□□ -0.65
LINC00658-207ENST00000609252 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
LINC00658-207ENST00000609252 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
LINC00658-207ENST00000609252 FLT4P35916 1363 aa10.96□□□□□ -0.65
LINC00658-207ENST00000609252 ERBB3P21860 1342 aa10.96□□□□□ -0.65
LINC00658-207ENST00000609252 HSP90AB2PQ58FF8 381 aa10.95□□□□□ -0.66
LINC00658-207ENST00000609252 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
LINC00658-207ENST00000609252 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
LINC00658-207ENST00000609252 THRAP3Q9Y2W1 955 aaKnown RBP10.95□□□□□ -0.66
LINC00658-207ENST00000609252 KAT6BQ8WYB5 2073 aa10.95□□□□□ -0.66
LINC00658-207ENST00000609252 THSD7AQ9UPZ6 1657 aa10.95□□□□□ -0.66
LINC00658-207ENST00000609252 INSRP06213 1382 aa10.94□□□□□ -0.66
LINC00658-207ENST00000609252 KIF24Q5T7B8 1368 aa10.94□□□□□ -0.66
LINC00658-207ENST00000609252 PARP4Q9UKK3 1724 aaKnown RBP10.94□□□□□ -0.66
LINC00658-207ENST00000609252 NPC1L1Q9UHC9 1359 aa10.93□□□□□ -0.66
LINC00658-207ENST00000609252 PDE3BQ13370 1112 aa10.93□□□□□ -0.66
LINC00658-207ENST00000609252 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
LINC00658-207ENST00000609252 EP400Q96L91 3159 aa10.92□□□□□ -0.66
LINC00658-207ENST00000609252 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
LINC00658-207ENST00000609252 KRT27Q7Z3Y8 459 aa10.92□□□□□ -0.66
LINC00658-207ENST00000609252 USHBP1Q8N6Y0 703 aa10.92□□□□□ -0.66
LINC00658-207ENST00000609252 LRRC37A3O60309 1634 aa10.91□□□□□ -0.66
LINC00658-207ENST00000609252 SOCS7O14512 581 aa10.91□□□□□ -0.66
LINC00658-207ENST00000609252 MTHFSP49914 203 aa10.91□□□□□ -0.66
LINC00658-207ENST00000609252 DDB1Q16531 1140 aa10.91□□□□□ -0.66
LINC00658-207ENST00000609252 IL2RBP14784 551 aa10.9□□□□□ -0.66
LINC00658-207ENST00000609252 FAM182BQ5T319 152 aa10.9□□□□□ -0.66
LINC00658-207ENST00000609252 NBPF6Q5VWK0 638 aa10.9□□□□□ -0.66
LINC00658-207ENST00000609252 MIER1Q8N108 512 aa10.9□□□□□ -0.66
LINC00658-207ENST00000609252 NBPF4Q96M43 638 aa10.9□□□□□ -0.66
LINC00658-207ENST00000609252 CDCA7Q9BWT1 371 aaPredicted RBP10.9□□□□□ -0.66
LINC00658-207ENST00000609252 EXOC5O00471 708 aa10.89□□□□□ -0.67
LINC00658-207ENST00000609252 EIF4A2Q14240 407 aaKnown RBP10.89□□□□□ -0.67
LINC00658-207ENST00000609252 RAPGEF4Q8WZA2 1011 aa10.89□□□□□ -0.67
LINC00658-207ENST00000609252 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
LINC00658-207ENST00000609252 DISP2A7MBM2 1401 aa10.87□□□□□ -0.67
LINC00658-207ENST00000609252 SBF2Q86WG5 1849 aa10.87□□□□□ -0.67
LINC00658-207ENST00000609252 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
LINC00658-207ENST00000609252 PPP2R1AP30153 589 aa10.87□□□□□ -0.67
LINC00658-207ENST00000609252 EYA1Q99502 592 aa10.87□□□□□ -0.67
LINC00658-207ENST00000609252 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
LINC00658-207ENST00000609252 TNS2Q63HR2 1409 aa10.86□□□□□ -0.67
LINC00658-207ENST00000609252 DIAPH1O60610 1272 aaKnown RBP10.86□□□□□ -0.67
LINC00658-207ENST00000609252 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
LINC00658-207ENST00000609252 MEGF6O75095 1541 aa10.85□□□□□ -0.67
LINC00658-207ENST00000609252 SHANK3Q9BYB0 1731 aa10.85□□□□□ -0.67
LINC00658-207ENST00000609252 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
LINC00658-207ENST00000609252 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
LINC00658-207ENST00000609252 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00658-207ENST00000609252 OVOS2A0A0G2JMS6 1433 aa10.84□□□□□ -0.67
LINC00658-207ENST00000609252 IL13P35225 146 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms